RNA–Protein interactions for RNA: ENST00000439008.1

LINC00399-201, long intergenic non-protein coding RNA 399, humanhuman

TSL 2 BASIC

Gene LINC00399, Length 414 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00399-201ENST00000439008 CLSTN2Q9H4D0 955 aa14.21□□□□□ -0.13
LINC00399-201ENST00000439008 MMRN2Q9H8L6 949 aa14.21□□□□□ -0.13
LINC00399-201ENST00000439008 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP14.21□□□□□ -0.13
LINC00399-201ENST00000439008 HMGXB4Q9UGU5 601 aa14.21□□□□□ -0.13
LINC00399-201ENST00000439008 CTNND2Q9UQB3 1225 aa14.21□□□□□ -0.13
LINC00399-201ENST00000439008 MRPS23Q9Y3D9 190 aaKnown RBP14.21□□□□□ -0.13
LINC00399-201ENST00000439008 COL4A3Q01955 1670 aa14.2□□□□□ -0.14
LINC00399-201ENST00000439008 NCANO14594 1321 aa14.2□□□□□ -0.14
LINC00399-201ENST00000439008 ZNF318Q5VUA4 2279 aa14.2□□□□□ -0.14
LINC00399-201ENST00000439008 GPR37L1O60883 481 aa14.2□□□□□ -0.14
LINC00399-201ENST00000439008 MYL4P12829 197 aa14.2□□□□□ -0.14
LINC00399-201ENST00000439008 ALADP13716 330 aa14.2□□□□□ -0.14
LINC00399-201ENST00000439008 CACNA2D1P54289 1103 aa14.2□□□□□ -0.14
LINC00399-201ENST00000439008 FKBP3Q00688 224 aaKnown RBP14.2□□□□□ -0.14
LINC00399-201ENST00000439008 TSPY1Q01534 308 aa14.2□□□□□ -0.14
LINC00399-201ENST00000439008 LRRC63Q05C16 580 aa14.2□□□□□ -0.14
LINC00399-201ENST00000439008 MTMR3Q13615 1198 aa14.2□□□□□ -0.14
LINC00399-201ENST00000439008 ZNF699Q32M78 642 aa14.2□□□□□ -0.14
LINC00399-201ENST00000439008 MGAT5BQ3V5L5 792 aa14.2□□□□□ -0.14
LINC00399-201ENST00000439008 CBWD6Q4V339 395 aa14.2□□□□□ -0.14
LINC00399-201ENST00000439008 CBWD3Q5JTY5 395 aa14.2□□□□□ -0.14
LINC00399-201ENST00000439008 CBWD5Q5RIA9 395 aa14.2□□□□□ -0.14
LINC00399-201ENST00000439008 STXBP5Q5T5C0 1151 aa14.2□□□□□ -0.14
LINC00399-201ENST00000439008 GAREM2Q75VX8 874 aa14.2□□□□□ -0.14
LINC00399-201ENST00000439008 DNAJB7Q7Z6W7 309 aaPredicted RBP14.2□□□□□ -0.14
LINC00399-201ENST00000439008 DCP1BQ8IZD4 617 aaKnown RBP14.2□□□□□ -0.14
LINC00399-201ENST00000439008 SLC44A3Q8N4M1 653 aa14.2□□□□□ -0.14
LINC00399-201ENST00000439008 SHKBP1Q8TBC3 707 aa14.2□□□□□ -0.14
LINC00399-201ENST00000439008 SYAP1Q96A49 352 aaPredicted RBP14.2□□□□□ -0.14
LINC00399-201ENST00000439008 ZNF512Q96ME7 567 aaPredicted RBP14.2□□□□□ -0.14
LINC00399-201ENST00000439008 PLA2G2FQ9BZM2 168 aa14.2□□□□□ -0.14
LINC00399-201ENST00000439008 IL21Q9HBE4 155 aa14.2□□□□□ -0.14
LINC00399-201ENST00000439008 HSFX1Q9UBD0 423 aa14.2□□□□□ -0.14
LINC00399-201ENST00000439008 SORCS3Q9UPU3 1222 aa14.2□□□□□ -0.14
LINC00399-201ENST00000439008 PCDHB5Q9Y5E4 795 aa14.2□□□□□ -0.14
LINC00399-201ENST00000439008 PSMA7O14818 248 aa14.19□□□□□ -0.14
LINC00399-201ENST00000439008 PDGFBP01127 241 aaPredicted RBP14.19□□□□□ -0.14
LINC00399-201ENST00000439008 KRT13P13646 458 aa14.19□□□□□ -0.14
LINC00399-201ENST00000439008 HMGA1P17096 107 aaKnown RBP14.19□□□□□ -0.14
LINC00399-201ENST00000439008 FCARP24071 287 aa14.19□□□□□ -0.14
LINC00399-201ENST00000439008 PCSK1P29120 753 aa14.19□□□□□ -0.14
LINC00399-201ENST00000439008 GNL1P36915 607 aaPredicted RBP14.19□□□□□ -0.14
LINC00399-201ENST00000439008 PIK3CAP42336 1068 aa14.19□□□□□ -0.14
LINC00399-201ENST00000439008 ASPAP45381 313 aa14.19□□□□□ -0.14
LINC00399-201ENST00000439008 ALDH1A3P47895 512 aa14.19□□□□□ -0.14
LINC00399-201ENST00000439008 TNNC1P63316 161 aa14.19□□□□□ -0.14
LINC00399-201ENST00000439008 MYL7Q01449 175 aa14.19□□□□□ -0.14
LINC00399-201ENST00000439008 ENPEPQ07075 957 aa14.19□□□□□ -0.14
LINC00399-201ENST00000439008 ORC1Q13415 861 aa14.19□□□□□ -0.14
LINC00399-201ENST00000439008 DDR2Q16832 855 aa14.19□□□□□ -0.14
LINC00399-201ENST00000439008 ZNF667Q5HYK9 610 aa14.19□□□□□ -0.14
LINC00399-201ENST00000439008 IER5LQ5T953 404 aa14.19□□□□□ -0.14
LINC00399-201ENST00000439008 TRIM67Q6ZTA4 783 aa14.19□□□□□ -0.14
LINC00399-201ENST00000439008 HFE2Q6ZVN8 426 aa14.19□□□□□ -0.14
LINC00399-201ENST00000439008 TMEM150AQ86TG1 271 aa14.19□□□□□ -0.14
LINC00399-201ENST00000439008 OR6B3Q8NGW1 331 aa14.19□□□□□ -0.14
LINC00399-201ENST00000439008 SPPL2BQ8TCT7 592 aa14.19□□□□□ -0.14
LINC00399-201ENST00000439008 PSMG2Q969U7 264 aa14.19□□□□□ -0.14
LINC00399-201ENST00000439008 SLC35C1Q96A29 364 aa14.19□□□□□ -0.14
LINC00399-201ENST00000439008 MYLPFQ96A32 169 aa14.19□□□□□ -0.14
LINC00399-201ENST00000439008 TSG101Q99816 390 aa14.19□□□□□ -0.14
LINC00399-201ENST00000439008 TMEM8AQ9HCN3 771 aa14.19□□□□□ -0.14
LINC00399-201ENST00000439008 RAPGEFL1Q9UHV5 662 aa14.19□□□□□ -0.14
LINC00399-201ENST00000439008 CDH9Q9ULB4 789 aa14.19□□□□□ -0.14
LINC00399-201ENST00000439008 R3HCC1Q9Y3T6 440 aaKnown RBP14.19□□□□□ -0.14
LINC00399-201ENST00000439008 NUMBLQ9Y6R0 609 aa14.19□□□□□ -0.14
LINC00399-201ENST00000439008 ZNF638Q14966 1978 aaKnown RBP14.19□□□□□ -0.14
LINC00399-201ENST00000439008 ANAPC1Q9H1A4 1944 aa14.19□□□□□ -0.14
LINC00399-201ENST00000439008 A0A1W2PRU2 124 aa14.18□□□□□ -0.14
LINC00399-201ENST00000439008 CLDN5O00501 218 aa14.18□□□□□ -0.14
LINC00399-201ENST00000439008 SLC16A3O15427 465 aaKnown RBP14.18□□□□□ -0.14
LINC00399-201ENST00000439008 EPB41P11171 864 aaKnown RBP14.18□□□□□ -0.14
LINC00399-201ENST00000439008 PTPN1P18031 435 aaKnown RBP14.18□□□□□ -0.14
LINC00399-201ENST00000439008 BDNFP23560 247 aa14.18□□□□□ -0.14
LINC00399-201ENST00000439008 EPHB3P54753 998 aa14.18□□□□□ -0.14
LINC00399-201ENST00000439008 TEAD2Q15562 447 aa14.18□□□□□ -0.14
LINC00399-201ENST00000439008 SGSM1Q2NKQ1 1148 aa14.18□□□□□ -0.14
LINC00399-201ENST00000439008 MDH1BQ5I0G3 518 aa14.18□□□□□ -0.14
LINC00399-201ENST00000439008 PAQR9Q6ZVX9 377 aa14.18□□□□□ -0.14
LINC00399-201ENST00000439008 GPIHBP1Q8IV16 184 aa14.18□□□□□ -0.14
LINC00399-201ENST00000439008 C2orf15Q8WU43 125 aaKnown RBP14.18□□□□□ -0.14
LINC00399-201ENST00000439008 TATDN2Q93075 761 aa14.18□□□□□ -0.14
LINC00399-201ENST00000439008 RSPRY1Q96DX4 576 aa14.18□□□□□ -0.14
LINC00399-201ENST00000439008 PCED1BQ96HM7 432 aa14.18□□□□□ -0.14
LINC00399-201ENST00000439008 TWNKQ96RR1 684 aa14.18□□□□□ -0.14
LINC00399-201ENST00000439008 KXD1Q9BQD3 176 aa14.18□□□□□ -0.14
LINC00399-201ENST00000439008 B3GNT5Q9BYG0 378 aa14.18□□□□□ -0.14
LINC00399-201ENST00000439008 BCO2Q9BYV7 579 aa14.18□□□□□ -0.14
LINC00399-201ENST00000439008 GTPBP4Q9BZE4 634 aaKnown RBP14.18□□□□□ -0.14
LINC00399-201ENST00000439008 FAM163BP0C2L3 166 aa14.17□□□□□ -0.14
LINC00399-201ENST00000439008 GTF2H1P32780 548 aa14.17□□□□□ -0.14
LINC00399-201ENST00000439008 TUFMP49411 452 aaKnown RBP14.17□□□□□ -0.14
LINC00399-201ENST00000439008 NOP14P78316 857 aaKnown RBP14.17□□□□□ -0.14
LINC00399-201ENST00000439008 SMARCB1Q12824 385 aa14.17□□□□□ -0.14
LINC00399-201ENST00000439008 PAK1Q13153 545 aa14.17□□□□□ -0.14
LINC00399-201ENST00000439008 TDGQ13569 410 aa14.17□□□□□ -0.14
LINC00399-201ENST00000439008 NFE2Q16621 373 aaPredicted RBP14.17□□□□□ -0.14
LINC00399-201ENST00000439008 CFAP221Q4G0U5 840 aa14.17□□□□□ -0.14
LINC00399-201ENST00000439008 FAM78AQ5JUQ0 283 aa14.17□□□□□ -0.14
LINC00399-201ENST00000439008 TMEM31Q5JXX7 168 aa14.17□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms