RNA–Protein interactions for RNA: ENST00000438862.6

CSTF3-203, Transcript of cleavage stimulation factor subunit 3, humanhuman

TSL 1 (best) BASIC

Gene CSTF3, Length 1,132 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF3-203ENST00000438862 PCDHB9Q9Y5E1 797 aa12.15□□□□□ -0.46
CSTF3-203ENST00000438862 SHROOM3Q8TF72 1996 aa12.14□□□□□ -0.47
CSTF3-203ENST00000438862 PLXNB3Q9ULL4 1909 aa12.14□□□□□ -0.47
CSTF3-203ENST00000438862 OR6C75A6NL08 312 aa12.14□□□□□ -0.47
CSTF3-203ENST00000438862 M0QZQ0 153 aa12.14□□□□□ -0.47
CSTF3-203ENST00000438862 ALDH1A2O94788 518 aa12.14□□□□□ -0.47
CSTF3-203ENST00000438862 DEXIO95424 95 aa12.14□□□□□ -0.47
CSTF3-203ENST00000438862 EDN1P05305 212 aa12.14□□□□□ -0.47
CSTF3-203ENST00000438862 LIG1P18858 919 aa12.14□□□□□ -0.47
CSTF3-203ENST00000438862 AVPR1AP37288 418 aa12.14□□□□□ -0.47
CSTF3-203ENST00000438862 SLC14A1Q13336 389 aa12.14□□□□□ -0.47
CSTF3-203ENST00000438862 BYSLQ13895 437 aaKnown RBP12.14□□□□□ -0.47
CSTF3-203ENST00000438862 NPY5RQ15761 445 aa12.14□□□□□ -0.47
CSTF3-203ENST00000438862 DUOXA1Q1HG43 343 aa12.14□□□□□ -0.47
CSTF3-203ENST00000438862 NT5DC1Q5TFE4 455 aa12.14□□□□□ -0.47
CSTF3-203ENST00000438862 PEAR1Q5VY43 1037 aaPredicted RBP12.14□□□□□ -0.47
CSTF3-203ENST00000438862 TRIM68Q6AZZ1 485 aa12.14□□□□□ -0.47
CSTF3-203ENST00000438862 ZNF787Q6DD87 383 aa12.14□□□□□ -0.47
CSTF3-203ENST00000438862 ANO7Q6IWH7 933 aa12.14□□□□□ -0.47
CSTF3-203ENST00000438862 CPA6Q8N4T0 437 aa12.14□□□□□ -0.47
CSTF3-203ENST00000438862 OLIG1Q8TAK6 271 aa12.14□□□□□ -0.47
CSTF3-203ENST00000438862 MDM1Q8TC05 714 aa12.14□□□□□ -0.47
CSTF3-203ENST00000438862 SPACA7Q96KW9 195 aa12.14□□□□□ -0.47
CSTF3-203ENST00000438862 ZMAT2Q96NC0 199 aaKnown RBP12.14□□□□□ -0.47
CSTF3-203ENST00000438862 POLR3CQ9BUI4 534 aaPredicted RBP12.14□□□□□ -0.47
CSTF3-203ENST00000438862 PILRBQ9UKJ0 227 aa12.14□□□□□ -0.47
CSTF3-203ENST00000438862 SLC27A5Q9Y2P5 690 aa12.14□□□□□ -0.47
CSTF3-203ENST00000438862 SNX14Q9Y5W7 946 aa12.14□□□□□ -0.47
CSTF3-203ENST00000438862 NAV2Q8IVL1 2488 aa12.14□□□□□ -0.47
CSTF3-203ENST00000438862 ASXL3Q9C0F0 2248 aa12.14□□□□□ -0.47
CSTF3-203ENST00000438862 KIAA1549LQ6ZVL6 1849 aa12.14□□□□□ -0.47
CSTF3-203ENST00000438862 TNRC6BQ9UPQ9 1833 aaKnown RBP12.14□□□□□ -0.47
CSTF3-203ENST00000438862 URB1O60287 2271 aaKnown RBP12.13□□□□□ -0.47
CSTF3-203ENST00000438862 MYO16Q9Y6X6 1858 aa12.13□□□□□ -0.47
CSTF3-203ENST00000438862 ZNF638Q14966 1978 aaKnown RBP12.13□□□□□ -0.47
CSTF3-203ENST00000438862 CFIP05156 583 aa12.13□□□□□ -0.47
CSTF3-203ENST00000438862 CD59P13987 128 aa12.13□□□□□ -0.47
CSTF3-203ENST00000438862 DDX6P26196 483 aaKnown RBP eCLIP12.13□□□□□ -0.47
CSTF3-203ENST00000438862 P2RY2P41231 377 aa12.13□□□□□ -0.47
CSTF3-203ENST00000438862 TUFMP49411 452 aaKnown RBP12.13□□□□□ -0.47
CSTF3-203ENST00000438862 CYP4F8P98187 520 aa12.13□□□□□ -0.47
CSTF3-203ENST00000438862 BFSP1Q12934 665 aa12.13□□□□□ -0.47
CSTF3-203ENST00000438862 MYBPC2Q14324 1141 aa12.13□□□□□ -0.47
CSTF3-203ENST00000438862 VEPH1Q14D04 833 aa12.13□□□□□ -0.47
CSTF3-203ENST00000438862 RABEPKQ7Z6M1 372 aa12.13□□□□□ -0.47
CSTF3-203ENST00000438862 ZNF605Q86T29 641 aa12.13□□□□□ -0.47
CSTF3-203ENST00000438862 USP37Q86T82 979 aa12.13□□□□□ -0.47
CSTF3-203ENST00000438862 EZH1Q92800 747 aaPredicted RBP12.13□□□□□ -0.47
CSTF3-203ENST00000438862 ACAP3Q96P50 834 aa12.13□□□□□ -0.47
CSTF3-203ENST00000438862 GTPBP2Q9BX10 602 aaKnown RBP12.13□□□□□ -0.47
CSTF3-203ENST00000438862 SMG9Q9H0W8 520 aaKnown RBP12.13□□□□□ -0.47
CSTF3-203ENST00000438862 ECT2Q9H8V3 914 aa12.13□□□□□ -0.47
CSTF3-203ENST00000438862 TDP1Q9NUW8 608 aa12.13□□□□□ -0.47
CSTF3-203ENST00000438862 CNTN3Q9P232 1028 aa12.13□□□□□ -0.47
CSTF3-203ENST00000438862 APOBEC2Q9Y235 224 aaKnown RBP12.13□□□□□ -0.47
CSTF3-203ENST00000438862 ADAMTS9Q9P2N4 1935 aa12.13□□□□□ -0.47
CSTF3-203ENST00000438862 PTPRDP23468 1912 aa12.12□□□□□ -0.47
CSTF3-203ENST00000438862 CITO14578 2027 aa12.12□□□□□ -0.47
CSTF3-203ENST00000438862 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa12.12□□□□□ -0.47
CSTF3-203ENST00000438862 MTMR11A4FU01 709 aa12.12□□□□□ -0.47
CSTF3-203ENST00000438862 K7ERI5 159 aa12.12□□□□□ -0.47
CSTF3-203ENST00000438862 SERPINF2P08697 491 aa12.12□□□□□ -0.47
CSTF3-203ENST00000438862 OR4Q2P0C623 313 aa12.12□□□□□ -0.47
CSTF3-203ENST00000438862 FTH1P19P0C7X4 201 aa12.12□□□□□ -0.47
CSTF3-203ENST00000438862 PLA2G2AP14555 144 aa12.12□□□□□ -0.47
CSTF3-203ENST00000438862 ARSAP15289 507 aa12.12□□□□□ -0.47
CSTF3-203ENST00000438862 PTGER3P43115 390 aa12.12□□□□□ -0.47
CSTF3-203ENST00000438862 OSTNP61366 133 aa12.12□□□□□ -0.47
CSTF3-203ENST00000438862 CCT2P78371 535 aaKnown RBP12.12□□□□□ -0.47
CSTF3-203ENST00000438862 NR1H3Q13133 447 aa12.12□□□□□ -0.47
CSTF3-203ENST00000438862 TAF12Q16514 161 aa12.12□□□□□ -0.47
CSTF3-203ENST00000438862 CRY1Q16526 586 aa12.12□□□□□ -0.47
CSTF3-203ENST00000438862 LYSMD4Q5XG99 296 aa12.12□□□□□ -0.47
CSTF3-203ENST00000438862 ARMCX5Q6P1M9 558 aa12.12□□□□□ -0.47
CSTF3-203ENST00000438862 SCUBE3Q8IX30 993 aa12.12□□□□□ -0.47
CSTF3-203ENST00000438862 TMEFF1Q8IYR6 380 aa12.12□□□□□ -0.47
CSTF3-203ENST00000438862 CEP120Q8N960 986 aa12.12□□□□□ -0.47
CSTF3-203ENST00000438862 ATAD1Q8NBU5 361 aa12.12□□□□□ -0.47
CSTF3-203ENST00000438862 LSM14AQ8ND56 463 aaKnown RBP12.12□□□□□ -0.47
CSTF3-203ENST00000438862 MDGA1Q8NFP4 955 aa12.12□□□□□ -0.47
CSTF3-203ENST00000438862 USP33Q8TEY7 942 aa12.12□□□□□ -0.47
CSTF3-203ENST00000438862 BSNDQ8WZ55 320 aa12.12□□□□□ -0.47
CSTF3-203ENST00000438862 USP13Q92995 863 aaPredicted RBP12.12□□□□□ -0.47
CSTF3-203ENST00000438862 C18orf25Q96B23 403 aaPredicted RBP12.12□□□□□ -0.47
CSTF3-203ENST00000438862 IFT74Q96LB3 600 aa12.12□□□□□ -0.47
CSTF3-203ENST00000438862 FNBP1Q96RU3 617 aa12.12□□□□□ -0.47
CSTF3-203ENST00000438862 PRR14Q9BWN1 585 aa12.12□□□□□ -0.47
CSTF3-203ENST00000438862 AGXT2Q9BYV1 514 aa12.12□□□□□ -0.47
CSTF3-203ENST00000438862 TMEM134Q9H6X4 195 aa12.12□□□□□ -0.47
CSTF3-203ENST00000438862 DNAAF2Q9NVR5 837 aaKnown RBP12.12□□□□□ -0.47
CSTF3-203ENST00000438862 MMP17Q9ULZ9 603 aa12.12□□□□□ -0.47
CSTF3-203ENST00000438862 ADGRG1Q9Y653 693 aa12.12□□□□□ -0.47
CSTF3-203ENST00000438862 CELSR3Q9NYQ7 3312 aa12.11□□□□□ -0.47
CSTF3-203ENST00000438862 A0A087WV48 116 aa12.11□□□□□ -0.47
CSTF3-203ENST00000438862 A0A087WWV3 80 aa12.11□□□□□ -0.47
CSTF3-203ENST00000438862 PRB1P04280 392 aa12.11□□□□□ -0.47
CSTF3-203ENST00000438862 SYPP08247 313 aa12.11□□□□□ -0.47
CSTF3-203ENST00000438862 U2AF2P26368 475 aaKnown RBP eCLIP12.11□□□□□ -0.478e-35■■■■□ 24.6
CSTF3-203ENST00000438862 PDIA3P30101 505 aaKnown RBP12.11□□□□□ -0.47
CSTF3-203ENST00000438862 SLC19A1P41440 591 aa12.11□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 75.7 ms