RNA–Protein interactions for RNA: ENST00000438224.5

HERPUD2-206, Transcript of HERPUD family member 2, humanhuman

TSL 3

Gene HERPUD2, Length 811 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD2-206ENST00000438224 DNAAF2Q9NVR5 837 aaKnown RBP9.2□□□□□ -0.94
HERPUD2-206ENST00000438224 DMAC2Q9NW81 257 aa9.2□□□□□ -0.94
HERPUD2-206ENST00000438224 L1RE1Q9UN81 338 aa9.2□□□□□ -0.94
HERPUD2-206ENST00000438224 AGAP1Q9UPQ3 857 aa9.2□□□□□ -0.94
HERPUD2-206ENST00000438224 YIPF1Q9Y548 306 aa9.2□□□□□ -0.94
HERPUD2-206ENST00000438224 NME7Q9Y5B8 376 aa9.2□□□□□ -0.94
HERPUD2-206ENST00000438224 HELZP42694 1942 aaKnown RBP9.2□□□□□ -0.94
HERPUD2-206ENST00000438224 OR6C75A6NL08 312 aa9.19□□□□□ -0.94
HERPUD2-206ENST00000438224 KIAA0391O15091 583 aaKnown RBP9.19□□□□□ -0.94
HERPUD2-206ENST00000438224 XYLBO75191 536 aa9.19□□□□□ -0.94
HERPUD2-206ENST00000438224 RHOBTB3O94955 611 aa9.19□□□□□ -0.94
HERPUD2-206ENST00000438224 LRG1P02750 347 aa9.19□□□□□ -0.94
HERPUD2-206ENST00000438224 TMEM191BP0C7N4 346 aa9.19□□□□□ -0.94
HERPUD2-206ENST00000438224 GJA1P17302 382 aa9.19□□□□□ -0.94
HERPUD2-206ENST00000438224 CASP4P49662 377 aa9.19□□□□□ -0.94
HERPUD2-206ENST00000438224 VCPP55072 806 aaKnown RBP9.19□□□□□ -0.94
HERPUD2-206ENST00000438224 TWF1Q12792 350 aa9.19□□□□□ -0.94
HERPUD2-206ENST00000438224 BFSP1Q12934 665 aa9.19□□□□□ -0.94
HERPUD2-206ENST00000438224 DUSP4Q13115 394 aa9.19□□□□□ -0.94
HERPUD2-206ENST00000438224 PNOCQ13519 176 aa9.19□□□□□ -0.94
HERPUD2-206ENST00000438224 SNW1Q13573 536 aaKnown RBP9.19□□□□□ -0.94
HERPUD2-206ENST00000438224 MTMR3Q13615 1198 aa9.19□□□□□ -0.94
HERPUD2-206ENST00000438224 MYBPC2Q14324 1141 aa9.19□□□□□ -0.94
HERPUD2-206ENST00000438224 PSMD6Q15008 389 aa9.19□□□□□ -0.94
HERPUD2-206ENST00000438224 SV2CQ496J9 727 aa9.19□□□□□ -0.94
HERPUD2-206ENST00000438224 PARM1Q6UWI2 310 aa9.19□□□□□ -0.94
HERPUD2-206ENST00000438224 HS2ST1Q7LGA3 356 aa9.19□□□□□ -0.94
HERPUD2-206ENST00000438224 LIMS2Q7Z4I7 341 aa9.19□□□□□ -0.94
HERPUD2-206ENST00000438224 BMP8AQ7Z5Y6 402 aa9.19□□□□□ -0.94
HERPUD2-206ENST00000438224 CSGALNACT2Q8N6G5 542 aa9.19□□□□□ -0.94
HERPUD2-206ENST00000438224 LRRC52Q8N7C0 313 aa9.19□□□□□ -0.94
HERPUD2-206ENST00000438224 XXYLT1Q8NBI6 393 aa9.19□□□□□ -0.94
HERPUD2-206ENST00000438224 ERCC4Q92889 916 aaPredicted RBP9.19□□□□□ -0.94
HERPUD2-206ENST00000438224 FGF14Q92915 247 aa9.19□□□□□ -0.94
HERPUD2-206ENST00000438224 ELMO3Q96BJ8 720 aa9.19□□□□□ -0.94
HERPUD2-206ENST00000438224 MFSD14AQ96MC6 490 aa9.19□□□□□ -0.94
HERPUD2-206ENST00000438224 ZNF560Q96MR9 790 aa9.19□□□□□ -0.94
HERPUD2-206ENST00000438224 PKMYT1Q99640 499 aa9.19□□□□□ -0.94
HERPUD2-206ENST00000438224 CGRRF1Q99675 332 aa9.19□□□□□ -0.94
HERPUD2-206ENST00000438224 CORO1BQ9BR76 489 aa9.19□□□□□ -0.94
HERPUD2-206ENST00000438224 ZCWPW1Q9H0M4 648 aa9.19□□□□□ -0.94
HERPUD2-206ENST00000438224 ZNF334Q9HCZ1 680 aaPredicted RBP9.19□□□□□ -0.94
HERPUD2-206ENST00000438224 DCTN4Q9UJW0 460 aa9.19□□□□□ -0.94
HERPUD2-206ENST00000438224 ITGA11Q9UKX5 1188 aa9.19□□□□□ -0.94
HERPUD2-206ENST00000438224 CDH7Q9ULB5 785 aa9.19□□□□□ -0.94
HERPUD2-206ENST00000438224 MAPK8IP1Q9UQF2 711 aa9.19□□□□□ -0.94
HERPUD2-206ENST00000438224 SLC27A5Q9Y2P5 690 aa9.19□□□□□ -0.94
HERPUD2-206ENST00000438224 GPSM3Q9Y4H4 160 aa9.19□□□□□ -0.94
HERPUD2-206ENST00000438224 NCANO14594 1321 aa9.19□□□□□ -0.94
HERPUD2-206ENST00000438224 PATJQ8NI35 1801 aa9.19□□□□□ -0.94
HERPUD2-206ENST00000438224 PRMT3O60678 531 aa9.18□□□□□ -0.94
HERPUD2-206ENST00000438224 CST3P01034 146 aaPredicted RBP9.18□□□□□ -0.94
HERPUD2-206ENST00000438224 MYL1P05976 194 aa9.18□□□□□ -0.94
HERPUD2-206ENST00000438224 KRT19P08727 400 aa9.18□□□□□ -0.94
HERPUD2-206ENST00000438224 DLATP10515 647 aaKnown RBP9.18□□□□□ -0.94
HERPUD2-206ENST00000438224 ATF6P18850 670 aa9.18□□□□□ -0.94
HERPUD2-206ENST00000438224 ELF1P32519 619 aa9.18□□□□□ -0.94
HERPUD2-206ENST00000438224 EPHA5P54756 1037 aa9.18□□□□□ -0.94
HERPUD2-206ENST00000438224 DLG4P78352 724 aa9.18□□□□□ -0.94
HERPUD2-206ENST00000438224 CLDN10P78369 228 aa9.18□□□□□ -0.94
HERPUD2-206ENST00000438224 TAGLNQ01995 201 aaKnown RBP9.18□□□□□ -0.94
HERPUD2-206ENST00000438224 PSMD2Q13200 908 aa9.18□□□□□ -0.94
HERPUD2-206ENST00000438224 TDGQ13569 410 aa9.18□□□□□ -0.94
HERPUD2-206ENST00000438224 SOWAHAQ2M3V2 549 aa9.18□□□□□ -0.94
HERPUD2-206ENST00000438224 SLC39A12Q504Y0 691 aa9.18□□□□□ -0.94
HERPUD2-206ENST00000438224 ZCWPW2Q504Y3 356 aa9.18□□□□□ -0.94
HERPUD2-206ENST00000438224 C1orf220Q5T0J3 134 aa9.18□□□□□ -0.94
HERPUD2-206ENST00000438224 RTL10Q7L3V2 364 aa9.18□□□□□ -0.94
HERPUD2-206ENST00000438224 TRAPPC11Q7Z392 1133 aa9.18□□□□□ -0.94
HERPUD2-206ENST00000438224 TMC8Q8IU68 726 aa9.18□□□□□ -0.94
HERPUD2-206ENST00000438224 WDR49Q8IV35 697 aa9.18□□□□□ -0.94
HERPUD2-206ENST00000438224 SMYD4Q8IYR2 804 aaPredicted RBP9.18□□□□□ -0.94
HERPUD2-206ENST00000438224 SLC44A3Q8N4M1 653 aa9.18□□□□□ -0.94
HERPUD2-206ENST00000438224 STKLD1Q8NE28 680 aa9.18□□□□□ -0.94
HERPUD2-206ENST00000438224 CACTINQ8WUQ7 758 aaKnown RBP9.18□□□□□ -0.94
HERPUD2-206ENST00000438224 KBTBD7Q8WVZ9 684 aa9.18□□□□□ -0.94
HERPUD2-206ENST00000438224 CCDC127Q96BQ5 260 aa9.18□□□□□ -0.94
HERPUD2-206ENST00000438224 ATG2BQ96BY7 2078 aa9.18□□□□□ -0.94
HERPUD2-206ENST00000438224 ANKRD36BP1Q96IX9 119 aa9.18□□□□□ -0.94
HERPUD2-206ENST00000438224 KXD1Q9BQD3 176 aa9.18□□□□□ -0.94
HERPUD2-206ENST00000438224 AVENQ9NQS1 362 aaPredicted RBP9.18□□□□□ -0.94
HERPUD2-206ENST00000438224 GDAP2Q9NXN4 497 aa9.18□□□□□ -0.94
HERPUD2-206ENST00000438224 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP9.18□□□□□ -0.94
HERPUD2-206ENST00000438224 IGSF9Q9P2J2 1179 aa9.18□□□□□ -0.94
HERPUD2-206ENST00000438224 DUSP12Q9UNI6 340 aa9.18□□□□□ -0.94
HERPUD2-206ENST00000438224 MRPS23Q9Y3D9 190 aaKnown RBP9.18□□□□□ -0.94
HERPUD2-206ENST00000438224 PCDHB9Q9Y5E1 797 aa9.18□□□□□ -0.94
HERPUD2-206ENST00000438224 SNX9Q9Y5X1 595 aa9.18□□□□□ -0.94
HERPUD2-206ENST00000438224 NUMBLQ9Y6R0 609 aa9.18□□□□□ -0.94
HERPUD2-206ENST00000438224 MYO16Q9Y6X6 1858 aa9.17□□□□□ -0.94
HERPUD2-206ENST00000438224 LRRIQ3A6PVS8 624 aaPredicted RBP9.17□□□□□ -0.94
HERPUD2-206ENST00000438224 PDXKO00764 312 aa9.17□□□□□ -0.94
HERPUD2-206ENST00000438224 GABRDO14764 452 aa9.17□□□□□ -0.94
HERPUD2-206ENST00000438224 EXOC3O60645 756 aa9.17□□□□□ -0.94
HERPUD2-206ENST00000438224 ATP2C2O75185 946 aa9.17□□□□□ -0.94
HERPUD2-206ENST00000438224 GADD45BO75293 160 aaPredicted RBP9.17□□□□□ -0.94
HERPUD2-206ENST00000438224 VNN1O95497 513 aa9.17□□□□□ -0.94
HERPUD2-206ENST00000438224 NR3C1P04150 777 aa9.17□□□□□ -0.94
HERPUD2-206ENST00000438224 HOXB1P14653 301 aaPredicted RBP9.17□□□□□ -0.94
HERPUD2-206ENST00000438224 PTPN2P17706 415 aa9.17□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms