RNA–Protein interactions for RNA: ENST00000435050.1

CLDN4-203, Transcript of claudin 4, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CLDN4, Length 4,163 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN4-203ENST00000435050 MAGED2Q9UNF1 606 aaPredicted RBP12.81□□□□□ -0.36
CLDN4-203ENST00000435050 TTLL3Q9Y4R7 772 aa12.81□□□□□ -0.36
CLDN4-203ENST00000435050 EXOC1LA0A1B0GW35 172 aa12.81□□□□□ -0.36
CLDN4-203ENST00000435050 XPOTO43592 962 aaKnown RBP12.81□□□□□ -0.36
CLDN4-203ENST00000435050 KRT7P08729 469 aa12.81□□□□□ -0.36
CLDN4-203ENST00000435050 CASC4Q6P4E1 433 aa12.81□□□□□ -0.36
CLDN4-203ENST00000435050 TSHZ1Q6ZSZ6 1077 aa12.81□□□□□ -0.36
CLDN4-203ENST00000435050 MON1BQ7L1V2 547 aa12.81□□□□□ -0.36
CLDN4-203ENST00000435050 SHCBP1Q8NEM2 672 aa12.81□□□□□ -0.36
CLDN4-203ENST00000435050 PPTC7Q8NI37 304 aa12.81□□□□□ -0.36
CLDN4-203ENST00000435050 RRP15Q9Y3B9 282 aaKnown RBP12.81□□□□□ -0.36
CLDN4-203ENST00000435050 MYH9P35579 1960 aaKnown RBP12.81□□□□□ -0.36
CLDN4-203ENST00000435050 ACO1P21399 889 aaKnown RBP12.81□□□□□ -0.36
CLDN4-203ENST00000435050 FNTAP49354 379 aa12.81□□□□□ -0.36
CLDN4-203ENST00000435050 CCL14Q16627 93 aa12.81□□□□□ -0.36
CLDN4-203ENST00000435050 PTPN20Q4JDL3 420 aa12.81□□□□□ -0.36
CLDN4-203ENST00000435050 DSTYKQ6XUX3 929 aa12.81□□□□□ -0.36
CLDN4-203ENST00000435050 CCDC121Q6ZUS5 278 aa12.81□□□□□ -0.36
CLDN4-203ENST00000435050 MAP7D3Q8IWC1 876 aa12.81□□□□□ -0.36
CLDN4-203ENST00000435050 ZBED8Q8IZ13 594 aa12.81□□□□□ -0.36
CLDN4-203ENST00000435050 NME8Q8N427 588 aa12.81□□□□□ -0.36
CLDN4-203ENST00000435050 LRRN4Q8WUT4 740 aa12.81□□□□□ -0.36
CLDN4-203ENST00000435050 C18orf25Q96B23 403 aaPredicted RBP12.81□□□□□ -0.36
CLDN4-203ENST00000435050 SYT11Q9BT88 431 aa12.81□□□□□ -0.36
CLDN4-203ENST00000435050 DCLK3Q9C098 648 aa12.81□□□□□ -0.36
CLDN4-203ENST00000435050 PABPC3Q9H361 631 aaKnown RBP12.81□□□□□ -0.36
CLDN4-203ENST00000435050 NXF3Q9H4D5 531 aaKnown RBP12.81□□□□□ -0.36
CLDN4-203ENST00000435050 PDZD7Q9H5P4 517 aa12.81□□□□□ -0.36
CLDN4-203ENST00000435050 DHX35Q9H5Z1 703 aaKnown RBP12.81□□□□□ -0.36
CLDN4-203ENST00000435050 GOLGA2P5Q9HBQ8 144 aa12.81□□□□□ -0.36
CLDN4-203ENST00000435050 NMRK2Q9NPI5 230 aa12.81□□□□□ -0.36
CLDN4-203ENST00000435050 DNPEPQ9ULA0 475 aa12.81□□□□□ -0.36
CLDN4-203ENST00000435050 SSC5DA1L4H1 1573 aa12.81□□□□□ -0.36
CLDN4-203ENST00000435050 IGKV6D-21A0A0A0MT36 114 aa12.81□□□□□ -0.36
CLDN4-203ENST00000435050 RECQL4O94761 1208 aa12.81□□□□□ -0.36
CLDN4-203ENST00000435050 MMP3P08254 477 aa12.81□□□□□ -0.36
CLDN4-203ENST00000435050 PEX5P50542 639 aa12.81□□□□□ -0.36
CLDN4-203ENST00000435050 YWHAGP61981 247 aaKnown RBP eCLIP12.81□□□□□ -0.36
CLDN4-203ENST00000435050 DUPD1Q68J44 220 aa12.81□□□□□ -0.36
CLDN4-203ENST00000435050 IQCKQ8N0W5 287 aa12.81□□□□□ -0.36
CLDN4-203ENST00000435050 NPLOC4Q8TAT6 608 aa12.81□□□□□ -0.36
CLDN4-203ENST00000435050 RAPGEF5Q92565 580 aa12.81□□□□□ -0.36
CLDN4-203ENST00000435050 RBM15Q96T37 977 aaKnown RBP eCLIP12.81□□□□□ -0.362e-8■■■■□ 24.1
CLDN4-203ENST00000435050 FZD8Q9H461 694 aa12.81□□□□□ -0.36
CLDN4-203ENST00000435050 STAU2Q9NUL3 570 aaKnown RBP eCLIP12.81□□□□□ -0.36
CLDN4-203ENST00000435050 TIMM13Q9Y5L4 95 aaPredicted RBP12.81□□□□□ -0.36
CLDN4-203ENST00000435050 RRN3P2A6NIE6 340 aa12.8□□□□□ -0.36
CLDN4-203ENST00000435050 PSTPIP1O43586 416 aa12.8□□□□□ -0.36
CLDN4-203ENST00000435050 PIGRP01833 764 aa12.8□□□□□ -0.36
CLDN4-203ENST00000435050 SMIM10L2AP0DMW4 78 aa12.8□□□□□ -0.36
CLDN4-203ENST00000435050 SMIM10L2BP0DMW5 78 aa12.8□□□□□ -0.36
CLDN4-203ENST00000435050 MMP8P22894 467 aa12.8□□□□□ -0.36
CLDN4-203ENST00000435050 STX2P32856 288 aa12.8□□□□□ -0.36
CLDN4-203ENST00000435050 DUSP28Q4G0W2 176 aa12.8□□□□□ -0.36
CLDN4-203ENST00000435050 SPRYD7Q5W111 196 aa12.8□□□□□ -0.36
CLDN4-203ENST00000435050 SCUBE3Q8IX30 993 aa12.8□□□□□ -0.36
CLDN4-203ENST00000435050 CNPY4Q8N129 248 aa12.8□□□□□ -0.36
CLDN4-203ENST00000435050 BBOF1Q8ND07 529 aa12.8□□□□□ -0.36
CLDN4-203ENST00000435050 THOC1Q96FV9 657 aaKnown RBP12.8□□□□□ -0.36
CLDN4-203ENST00000435050 SAMD15Q9P1V8 674 aa12.8□□□□□ -0.36
CLDN4-203ENST00000435050 E5RJQ4 531 aa12.8□□□□□ -0.36
CLDN4-203ENST00000435050 SOCS7O14512 581 aa12.8□□□□□ -0.36
CLDN4-203ENST00000435050 PMM2O15305 246 aa12.8□□□□□ -0.36
CLDN4-203ENST00000435050 IQCF3P0C7M6 154 aa12.8□□□□□ -0.36
CLDN4-203ENST00000435050 ACAT1P24752 427 aaKnown RBP12.8□□□□□ -0.36
CLDN4-203ENST00000435050 LSP1P33241 339 aa12.8□□□□□ -0.36
CLDN4-203ENST00000435050 SNX16P57768 344 aa12.8□□□□□ -0.36
CLDN4-203ENST00000435050 PDIA2Q13087 525 aaKnown RBP12.8□□□□□ -0.36
CLDN4-203ENST00000435050 MFSD10Q14728 455 aa12.8□□□□□ -0.36
CLDN4-203ENST00000435050 C15orf59Q2T9L4 293 aaPredicted RBP12.8□□□□□ -0.36
CLDN4-203ENST00000435050 SLC10A6Q3KNW5 377 aa12.8□□□□□ -0.36
CLDN4-203ENST00000435050 SPOCD1Q6ZMY3 1216 aa12.8□□□□□ -0.36
CLDN4-203ENST00000435050 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP12.8□□□□□ -0.36
CLDN4-203ENST00000435050 CPXM1Q96SM3 734 aa12.8□□□□□ -0.36
CLDN4-203ENST00000435050 CDC42EP4Q9H3Q1 356 aaKnown RBP12.8□□□□□ -0.36
CLDN4-203ENST00000435050 TMBIM4Q9HC24 238 aa12.8□□□□□ -0.36
CLDN4-203ENST00000435050 TMEM59LQ9UK28 342 aa12.8□□□□□ -0.36
CLDN4-203ENST00000435050 MAD1L1Q9Y6D9 718 aa12.8□□□□□ -0.36
CLDN4-203ENST00000435050 LGR5O75473 907 aa12.8□□□□□ -0.36
CLDN4-203ENST00000435050 SNAI1O95863 264 aaPredicted RBP12.8□□□□□ -0.36
CLDN4-203ENST00000435050 PGK1P00558 417 aa12.8□□□□□ -0.36
CLDN4-203ENST00000435050 MDH1P40925 334 aaKnown RBP12.8□□□□□ -0.36
CLDN4-203ENST00000435050 EIF3EP60228 445 aaKnown RBP12.8□□□□□ -0.36
CLDN4-203ENST00000435050 ADCY2Q08462 1091 aa12.8□□□□□ -0.36
CLDN4-203ENST00000435050 PPP2R5DQ14738 602 aa12.8□□□□□ -0.36
CLDN4-203ENST00000435050 C6orf118Q5T5N4 469 aa12.8□□□□□ -0.36
CLDN4-203ENST00000435050 P3H4Q92791 437 aa12.8□□□□□ -0.36
CLDN4-203ENST00000435050 ARHGEF2Q92974 986 aaKnown RBP12.8□□□□□ -0.36
CLDN4-203ENST00000435050 TWNKQ96RR1 684 aa12.8□□□□□ -0.36
CLDN4-203ENST00000435050 EIF2AQ9BY44 585 aaKnown RBP12.8□□□□□ -0.36
CLDN4-203ENST00000435050 EIF3HO15372 352 aaKnown RBP eCLIP12.79□□□□□ -0.36
CLDN4-203ENST00000435050 CYP1A1P04798 512 aaPredicted RBP12.79□□□□□ -0.36
CLDN4-203ENST00000435050 FAXCQ5TGI0 409 aa12.79□□□□□ -0.36
CLDN4-203ENST00000435050 CXCL17Q6UXB2 119 aa12.79□□□□□ -0.36
CLDN4-203ENST00000435050 ACTL9Q8TC94 416 aa12.79□□□□□ -0.36
CLDN4-203ENST00000435050 RXFP2Q8WXD0 754 aa12.79□□□□□ -0.36
CLDN4-203ENST00000435050 ASB7Q9H672 318 aa12.79□□□□□ -0.36
CLDN4-203ENST00000435050 STYXL1Q9Y6J8 313 aa12.79□□□□□ -0.36
CLDN4-203ENST00000435050 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP12.79□□□□□ -0.36
CLDN4-203ENST00000435050 ITIH2P19823 946 aa12.79□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms