RNA–Protein interactions for RNA: ENST00000433297.2

HMGCS1-202, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene HMGCS1, Length 3,466 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-202ENST00000433297 SLC4A7Q9Y6M7 1214 aa12.12□□□□□ -0.47
HMGCS1-202ENST00000433297 SCN7AQ01118 1682 aa12.12□□□□□ -0.47
HMGCS1-202ENST00000433297 COL22A1Q8NFW1 1626 aaPredicted RBP12.12□□□□□ -0.47
HMGCS1-202ENST00000433297 TMEM150BA6NC51 233 aa12.12□□□□□ -0.47
HMGCS1-202ENST00000433297 ATP6V1B1P15313 513 aa12.12□□□□□ -0.47
HMGCS1-202ENST00000433297 TM4SF1P30408 202 aa12.12□□□□□ -0.47
HMGCS1-202ENST00000433297 GABPAQ06546 454 aa12.12□□□□□ -0.47
HMGCS1-202ENST00000433297 DLG1Q12959 904 aa12.12□□□□□ -0.47
HMGCS1-202ENST00000433297 ZYXQ15942 572 aaKnown RBP12.12□□□□□ -0.47
HMGCS1-202ENST00000433297 TRMT5Q32P41 509 aaKnown RBP12.12□□□□□ -0.47
HMGCS1-202ENST00000433297 DAW1Q8N136 415 aa12.12□□□□□ -0.47
HMGCS1-202ENST00000433297 ZNF276Q8N554 614 aa12.12□□□□□ -0.47
HMGCS1-202ENST00000433297 POU5F2Q8N7G0 328 aa12.12□□□□□ -0.47
HMGCS1-202ENST00000433297 BANPQ8N9N5 519 aa12.12□□□□□ -0.47
HMGCS1-202ENST00000433297 CEP70Q8NHQ1 597 aa12.12□□□□□ -0.47
HMGCS1-202ENST00000433297 HELQQ8TDG4 1101 aa12.12□□□□□ -0.47
HMGCS1-202ENST00000433297 TUFT1Q9NNX1 390 aa12.12□□□□□ -0.47
HMGCS1-202ENST00000433297 IGKV6D-41A0A0C4DH26 115 aa12.11□□□□□ -0.47
HMGCS1-202ENST00000433297 PRR5-ARHGAP8B1AHC4 643 aa12.11□□□□□ -0.47
HMGCS1-202ENST00000433297 I3L4J1 428 aa12.11□□□□□ -0.47
HMGCS1-202ENST00000433297 GRIN3BO60391 1043 aa12.11□□□□□ -0.47
HMGCS1-202ENST00000433297 ATP6V1G1O75348 118 aa12.11□□□□□ -0.47
HMGCS1-202ENST00000433297 PDE5AO76074 875 aa12.11□□□□□ -0.47
HMGCS1-202ENST00000433297 FOSP01100 380 aaPredicted RBP12.11□□□□□ -0.47
HMGCS1-202ENST00000433297 CFHP08603 1231 aa12.11□□□□□ -0.47
HMGCS1-202ENST00000433297 ADRA2BP18089 450 aa12.11□□□□□ -0.47
HMGCS1-202ENST00000433297 AQP5P55064 265 aa12.11□□□□□ -0.47
HMGCS1-202ENST00000433297 AQP4P55087 323 aa12.11□□□□□ -0.47
HMGCS1-202ENST00000433297 PEX3P56589 373 aa12.11□□□□□ -0.47
HMGCS1-202ENST00000433297 ACTR3P61158 418 aa12.11□□□□□ -0.47
HMGCS1-202ENST00000433297 GPSM2P81274 684 aa12.11□□□□□ -0.47
HMGCS1-202ENST00000433297 ARHGAP8P85298 464 aa12.11□□□□□ -0.47
HMGCS1-202ENST00000433297 UBAP2LQ14157 1087 aaKnown RBP12.11□□□□□ -0.47
HMGCS1-202ENST00000433297 TTLL12Q14166 644 aaPredicted RBP12.11□□□□□ -0.47
HMGCS1-202ENST00000433297 KRT72Q14CN4 511 aa12.11□□□□□ -0.47
HMGCS1-202ENST00000433297 TRIP10Q15642 601 aa12.11□□□□□ -0.47
HMGCS1-202ENST00000433297 SNRNP35Q16560 246 aaKnown RBP12.11□□□□□ -0.47
HMGCS1-202ENST00000433297 ANKRD22Q5VYY1 191 aa12.11□□□□□ -0.47
HMGCS1-202ENST00000433297 NET1Q7Z628 596 aaPredicted RBP12.11□□□□□ -0.47
HMGCS1-202ENST00000433297 LINC00116Q8NCU8 138 aa12.11□□□□□ -0.47
HMGCS1-202ENST00000433297 DDX1Q92499 740 aaKnown RBP12.11□□□□□ -0.47
HMGCS1-202ENST00000433297 AGBL1Q96MI9 1066 aa12.11□□□□□ -0.47
HMGCS1-202ENST00000433297 ZNF577Q9BSK1 485 aa12.11□□□□□ -0.47
HMGCS1-202ENST00000433297 TMEM206Q9H813 350 aa12.11□□□□□ -0.47
HMGCS1-202ENST00000433297 GPRC5CQ9NQ84 441 aa12.11□□□□□ -0.47
HMGCS1-202ENST00000433297 CLUHO75153 1309 aa12.11□□□□□ -0.47
HMGCS1-202ENST00000433297 TM9SF1O15321 606 aa12.11□□□□□ -0.47
HMGCS1-202ENST00000433297 ZNF862O60290 1169 aa12.11□□□□□ -0.47
HMGCS1-202ENST00000433297 TM7SF2O76062 418 aa12.11□□□□□ -0.47
HMGCS1-202ENST00000433297 SORBS2O94875 1100 aaKnown RBP12.11□□□□□ -0.47
HMGCS1-202ENST00000433297 CRABP2P29373 138 aa12.11□□□□□ -0.47
HMGCS1-202ENST00000433297 PRELPP51888 382 aa12.11□□□□□ -0.47
HMGCS1-202ENST00000433297 BTKQ06187 659 aa12.11□□□□□ -0.47
HMGCS1-202ENST00000433297 PTK7Q13308 1070 aa12.11□□□□□ -0.47
HMGCS1-202ENST00000433297 NCOA4Q13772 614 aa12.11□□□□□ -0.47
HMGCS1-202ENST00000433297 ATP11CQ8NB49 1132 aa12.11□□□□□ -0.47
HMGCS1-202ENST00000433297 CRYGNQ8WXF5 182 aa12.11□□□□□ -0.47
HMGCS1-202ENST00000433297 SERAC1Q96JX3 654 aa12.11□□□□□ -0.47
HMGCS1-202ENST00000433297 IWS1Q96ST2 819 aa12.11□□□□□ -0.47
HMGCS1-202ENST00000433297 KIFC3Q9BVG8 833 aa12.11□□□□□ -0.47
HMGCS1-202ENST00000433297 FOXP3Q9BZS1 431 aa12.11□□□□□ -0.47
HMGCS1-202ENST00000433297 ARHGEF4Q9NR80 690 aa12.11□□□□□ -0.47
HMGCS1-202ENST00000433297 TMCO1Q9UM00 188 aa12.11□□□□□ -0.47
HMGCS1-202ENST00000433297 KIF13BQ9NQT8 1826 aa12.11□□□□□ -0.47
HMGCS1-202ENST00000433297 SHANK3Q9BYB0 1731 aa12.11□□□□□ -0.47
HMGCS1-202ENST00000433297 DENND3A2RUS2 1198 aa12.1□□□□□ -0.47
HMGCS1-202ENST00000433297 ZSCAN9O15535 394 aaPredicted RBP12.1□□□□□ -0.47
HMGCS1-202ENST00000433297 ASLP04424 464 aa12.1□□□□□ -0.47
HMGCS1-202ENST00000433297 HLA-DOAP06340 250 aa12.1□□□□□ -0.47
HMGCS1-202ENST00000433297 HNRNPCP07910 306 aaKnown RBP eCLIP12.1□□□□□ -0.47
HMGCS1-202ENST00000433297 ITGA2BP08514 1039 aa12.1□□□□□ -0.47
HMGCS1-202ENST00000433297 RAP1GDS1P52306 607 aa12.1□□□□□ -0.47
HMGCS1-202ENST00000433297 FAAP100Q0VG06 881 aa12.1□□□□□ -0.47
HMGCS1-202ENST00000433297 MORF4L2Q15014 288 aa12.1□□□□□ -0.47
HMGCS1-202ENST00000433297 EFHC2Q5JST6 749 aa12.1□□□□□ -0.47
HMGCS1-202ENST00000433297 HAUS6Q7Z4H7 955 aa12.1□□□□□ -0.47
HMGCS1-202ENST00000433297 SLC9A9Q8IVB4 645 aa12.1□□□□□ -0.47
HMGCS1-202ENST00000433297 OGFOD1Q8N543 542 aa12.1□□□□□ -0.47
HMGCS1-202ENST00000433297 FBXL13Q8NEE6 735 aa12.1□□□□□ -0.47
HMGCS1-202ENST00000433297 PHF12Q96QT6 1004 aa12.1□□□□□ -0.47
HMGCS1-202ENST00000433297 HAPLN3Q96S86 360 aa12.1□□□□□ -0.47
HMGCS1-202ENST00000433297 ITGB4P16144 1822 aa12.1□□□□□ -0.47
HMGCS1-202ENST00000433297 C10orf71Q711Q0 1435 aa12.1□□□□□ -0.47
HMGCS1-202ENST00000433297 F8W8V4 182 aa12.1□□□□□ -0.47
HMGCS1-202ENST00000433297 P4HA2O15460 535 aa12.1□□□□□ -0.47
HMGCS1-202ENST00000433297 MAGEC1O60732 1142 aa12.1□□□□□ -0.47
HMGCS1-202ENST00000433297 DNAJC6O75061 913 aa12.1□□□□□ -0.47
HMGCS1-202ENST00000433297 INHBAP08476 426 aa12.1□□□□□ -0.47
HMGCS1-202ENST00000433297 DESP17661 470 aa12.1□□□□□ -0.47
HMGCS1-202ENST00000433297 VCLP18206 1134 aa12.1□□□□□ -0.47
HMGCS1-202ENST00000433297 PEX2P28328 305 aa12.1□□□□□ -0.47
HMGCS1-202ENST00000433297 YWHAGP61981 247 aaKnown RBP eCLIP12.1□□□□□ -0.47
HMGCS1-202ENST00000433297 BASP1P80723 227 aaKnown RBP12.1□□□□□ -0.47
HMGCS1-202ENST00000433297 HIC1Q14526 733 aa12.1□□□□□ -0.47
HMGCS1-202ENST00000433297 PRKD1Q15139 912 aaPredicted RBP12.1□□□□□ -0.47
HMGCS1-202ENST00000433297 LIN9Q5TKA1 542 aa12.1□□□□□ -0.47
HMGCS1-202ENST00000433297 RBM44Q6ZP01 1051 aaKnown RBP12.1□□□□□ -0.47
HMGCS1-202ENST00000433297 NCAPG2Q86XI2 1143 aa12.1□□□□□ -0.47
HMGCS1-202ENST00000433297 MYLK4Q86YV6 388 aaPredicted RBP12.1□□□□□ -0.47
HMGCS1-202ENST00000433297 ZNF513Q8N8E2 541 aaPredicted RBP12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms