RNA–Protein interactions for RNA: ENST00000431146.6

USHBP1-203, Transcript of USH1 protein network component harmonin binding protein 1, humanhuman

TSL 2 BASIC

Gene USHBP1, Length 2,136 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USHBP1-203ENST00000431146 HEMGNQ9BXL5 484 aa17.63■□□□□ 0.41
USHBP1-203ENST00000431146 NEUROG2Q9H2A3 272 aa17.63■□□□□ 0.41
USHBP1-203ENST00000431146 FAM49BQ9NUQ9 324 aa17.63■□□□□ 0.41
USHBP1-203ENST00000431146 CACNG4Q9UBN1 327 aa17.63■□□□□ 0.41
USHBP1-203ENST00000431146 TSPAN16Q9UKR8 245 aa17.63■□□□□ 0.41
USHBP1-203ENST00000431146 SBDSQ9Y3A5 250 aaKnown RBP eCLIP17.63■□□□□ 0.41
USHBP1-203ENST00000431146 GRIN2DO15399 1336 aa17.63■□□□□ 0.41
USHBP1-203ENST00000431146 IBSPP21815 317 aaPredicted RBP17.63■□□□□ 0.41
USHBP1-203ENST00000431146 ECHS1P30084 290 aa17.63■□□□□ 0.41
USHBP1-203ENST00000431146 RFC1P35251 1148 aaPredicted RBP17.63■□□□□ 0.41
USHBP1-203ENST00000431146 GPD2P43304 727 aa17.63■□□□□ 0.41
USHBP1-203ENST00000431146 CLUL1Q15846 466 aa17.63■□□□□ 0.41
USHBP1-203ENST00000431146 CNGA2Q16280 664 aa17.63■□□□□ 0.41
USHBP1-203ENST00000431146 SOWAHAQ2M3V2 549 aa17.63■□□□□ 0.41
USHBP1-203ENST00000431146 ZNF618Q5T7W0 954 aa17.63■□□□□ 0.41
USHBP1-203ENST00000431146 EMBQ6PCB8 327 aa17.63■□□□□ 0.41
USHBP1-203ENST00000431146 SERINC5Q86VE9 423 aa17.63■□□□□ 0.41
USHBP1-203ENST00000431146 RHOT1Q8IXI2 618 aa17.63■□□□□ 0.41
USHBP1-203ENST00000431146 ACSF2Q96CM8 615 aaPredicted RBP17.63■□□□□ 0.41
USHBP1-203ENST00000431146 TOMM70O94826 608 aa17.62■□□□□ 0.41
USHBP1-203ENST00000431146 KCNJ1P48048 391 aa17.62■□□□□ 0.41
USHBP1-203ENST00000431146 PDCLQ13371 301 aa17.62■□□□□ 0.41
USHBP1-203ENST00000431146 PPP1R26Q5T8A7 1209 aaPredicted RBP17.62■□□□□ 0.41
USHBP1-203ENST00000431146 TXNRD3NBQ6F5E7 133 aa17.62■□□□□ 0.41
USHBP1-203ENST00000431146 ANKS1BQ7Z6G8 1248 aa17.62■□□□□ 0.41
USHBP1-203ENST00000431146 XYLT1Q86Y38 959 aa17.62■□□□□ 0.41
USHBP1-203ENST00000431146 EMC1Q8N766 993 aa17.62■□□□□ 0.41
USHBP1-203ENST00000431146 LRRC52Q8N7C0 313 aa17.62■□□□□ 0.41
USHBP1-203ENST00000431146 OR6B3Q8NGW1 331 aa17.62■□□□□ 0.41
USHBP1-203ENST00000431146 C1orf54Q8WWF1 131 aa17.62■□□□□ 0.41
USHBP1-203ENST00000431146 RIN2Q8WYP3 895 aaPredicted RBP17.62■□□□□ 0.41
USHBP1-203ENST00000431146 SENP6Q9GZR1 1112 aaPredicted RBP17.62■□□□□ 0.41
USHBP1-203ENST00000431146 DPEP3Q9H4B8 488 aa17.62■□□□□ 0.41
USHBP1-203ENST00000431146 METTL5Q9NRN9 209 aaKnown RBP17.62■□□□□ 0.41
USHBP1-203ENST00000431146 UTP11Q9Y3A2 253 aaKnown RBP17.62■□□□□ 0.41
USHBP1-203ENST00000431146 VGLL3A8MV65 326 aa17.62■□□□□ 0.41
USHBP1-203ENST00000431146 BHMG1C9JSJ3 638 aaPredicted RBP17.62■□□□□ 0.41
USHBP1-203ENST00000431146 PI4K2BG5E9Z4 385 aa17.62■□□□□ 0.41
USHBP1-203ENST00000431146 PIRO00625 290 aa17.62■□□□□ 0.41
USHBP1-203ENST00000431146 PSTPIP1O43586 416 aa17.62■□□□□ 0.41
USHBP1-203ENST00000431146 KRT3P12035 628 aa17.62■□□□□ 0.41
USHBP1-203ENST00000431146 IGFBP6P24592 240 aaPredicted RBP17.62■□□□□ 0.41
USHBP1-203ENST00000431146 THPOP40225 353 aa17.62■□□□□ 0.41
USHBP1-203ENST00000431146 AFF1P51825 1210 aaKnown RBP17.62■□□□□ 0.41
USHBP1-203ENST00000431146 FBXO47Q5MNV8 452 aa17.62■□□□□ 0.41
USHBP1-203ENST00000431146 ZFYVE27Q5T4F4 411 aa17.62■□□□□ 0.41
USHBP1-203ENST00000431146 CCDC137Q6PK04 289 aaKnown RBP17.62■□□□□ 0.41
USHBP1-203ENST00000431146 RSPH3Q86UC2 560 aa17.62■□□□□ 0.41
USHBP1-203ENST00000431146 LPPQ93052 612 aa17.62■□□□□ 0.41
USHBP1-203ENST00000431146 CAVIN3Q969G5 261 aa17.62■□□□□ 0.41
USHBP1-203ENST00000431146 RNF25Q96BH1 459 aaPredicted RBP17.62■□□□□ 0.41
USHBP1-203ENST00000431146 PRDM10Q9NQV6 1147 aa17.62■□□□□ 0.41
USHBP1-203ENST00000431146 STRIP2Q9ULQ0 834 aa17.62■□□□□ 0.41
USHBP1-203ENST00000431146 PTPN22Q9Y2R2 807 aa17.62■□□□□ 0.41
USHBP1-203ENST00000431146 TULP2O00295 520 aa17.61■□□□□ 0.41
USHBP1-203ENST00000431146 PTGESO14684 152 aa17.61■□□□□ 0.41
USHBP1-203ENST00000431146 HMGCRP04035 888 aa17.61■□□□□ 0.41
USHBP1-203ENST00000431146 PDGFRBP09619 1106 aa17.61■□□□□ 0.41
USHBP1-203ENST00000431146 RALAP11233 206 aa17.61■□□□□ 0.41
USHBP1-203ENST00000431146 KCNE1P15382 129 aa17.61■□□□□ 0.41
USHBP1-203ENST00000431146 HSPA6P17066 643 aa17.61■□□□□ 0.41
USHBP1-203ENST00000431146 CDR1P51861 262 aa17.61■□□□□ 0.41
USHBP1-203ENST00000431146 SNX1Q13596 522 aa17.61■□□□□ 0.41
USHBP1-203ENST00000431146 PTGISQ16647 500 aa17.61■□□□□ 0.41
USHBP1-203ENST00000431146 GOLGA7BQ2TAP0 167 aa17.61■□□□□ 0.41
USHBP1-203ENST00000431146 XKR4Q5GH76 650 aa17.61■□□□□ 0.41
USHBP1-203ENST00000431146 CCSAPQ6IQ19 270 aaPredicted RBP17.61■□□□□ 0.41
USHBP1-203ENST00000431146 JAMLQ86YT9 394 aa17.61■□□□□ 0.41
USHBP1-203ENST00000431146 KLHDC9Q8NEP7 349 aa17.61■□□□□ 0.41
USHBP1-203ENST00000431146 ATG4AQ8WYN0 398 aa17.61■□□□□ 0.41
USHBP1-203ENST00000431146 FAM118BQ9BPY3 351 aa17.61■□□□□ 0.41
USHBP1-203ENST00000431146 PLVAPQ9BX97 442 aa17.61■□□□□ 0.41
USHBP1-203ENST00000431146 VIPAS39Q9H9C1 493 aa17.61■□□□□ 0.41
USHBP1-203ENST00000431146 AGO3Q9H9G7 860 aaKnown RBP17.61■□□□□ 0.41
USHBP1-203ENST00000431146 MTUS1Q9ULD2 1270 aa17.61■□□□□ 0.41
USHBP1-203ENST00000431146 KPNA7A9QM74 516 aa17.6■□□□□ 0.41
USHBP1-203ENST00000431146 FSCN2O14926 492 aa17.6■□□□□ 0.41
USHBP1-203ENST00000431146 PFKMP08237 780 aa17.6■□□□□ 0.41
USHBP1-203ENST00000431146 CHRNA3P32297 505 aa17.6■□□□□ 0.41
USHBP1-203ENST00000431146 MAN1A1P33908 653 aa17.6■□□□□ 0.41
USHBP1-203ENST00000431146 PTGIRP43119 386 aa17.6■□□□□ 0.41
USHBP1-203ENST00000431146 RGS7P49802 495 aa17.6■□□□□ 0.41
USHBP1-203ENST00000431146 GYS2P54840 703 aa17.6■□□□□ 0.41
USHBP1-203ENST00000431146 SRRDQ9UH36 339 aa17.6■□□□□ 0.41
USHBP1-203ENST00000431146 THSD7BQ9C0I4 1608 aa17.6■□□□□ 0.41
USHBP1-203ENST00000431146 SIGLEC16A6NMB1 481 aa17.6■□□□□ 0.41
USHBP1-203ENST00000431146 A8MXQ7 604 aa17.6■□□□□ 0.41
USHBP1-203ENST00000431146 CD4P01730 458 aa17.6■□□□□ 0.41
USHBP1-203ENST00000431146 FGFR1P11362 822 aa17.6■□□□□ 0.41
USHBP1-203ENST00000431146 ATF7P17544 494 aaPredicted RBP17.6■□□□□ 0.41
USHBP1-203ENST00000431146 PSMA2P25787 234 aa17.6■□□□□ 0.41
USHBP1-203ENST00000431146 LMO2P25791 158 aa17.6■□□□□ 0.41
USHBP1-203ENST00000431146 FLT3P36888 993 aa17.6■□□□□ 0.41
USHBP1-203ENST00000431146 COILP38432 576 aaPredicted RBP17.6■□□□□ 0.41
USHBP1-203ENST00000431146 GGCXP38435 758 aa17.6■□□□□ 0.41
USHBP1-203ENST00000431146 CUL1Q13616 776 aa17.6■□□□□ 0.41
USHBP1-203ENST00000431146 LCLAT1Q6UWP7 414 aa17.6■□□□□ 0.41
USHBP1-203ENST00000431146 CCDC105Q8IYK2 499 aa17.6■□□□□ 0.41
USHBP1-203ENST00000431146 KATNAL2Q8IYT4 538 aa17.6■□□□□ 0.41
USHBP1-203ENST00000431146 KBTBD7Q8WVZ9 684 aa17.6■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms