RNA–Protein interactions for RNA: ENST00000430711.5

COL28A1-202, Transcript of collagen type XXVIII alpha 1 chain, humanhuman

TSL 5

Gene COL28A1, Length 2,323 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL28A1-202ENST00000430711 KCTD17Q8N5Z5 321 aa7.57□□□□□ -1.2
COL28A1-202ENST00000430711 ALLCQ8N6M5 410 aa7.57□□□□□ -1.2
COL28A1-202ENST00000430711 UBR7Q8N806 425 aa7.57□□□□□ -1.2
COL28A1-202ENST00000430711 REPS2Q8NFH8 660 aa7.57□□□□□ -1.2
COL28A1-202ENST00000430711 MAGEC3Q8TD91 643 aa7.57□□□□□ -1.2
COL28A1-202ENST00000430711 MORC4Q8TE76 937 aa7.57□□□□□ -1.2
COL28A1-202ENST00000430711 PGLYRP2Q96PD5 576 aa7.57□□□□□ -1.2
COL28A1-202ENST00000430711 PCYT2Q99447 389 aa7.57□□□□□ -1.2
COL28A1-202ENST00000430711 ZWILCHQ9H900 591 aa7.57□□□□□ -1.2
COL28A1-202ENST00000430711 VPS37BQ9H9H4 285 aa7.57□□□□□ -1.2
COL28A1-202ENST00000430711 NPHS2Q9NP85 383 aa7.57□□□□□ -1.2
COL28A1-202ENST00000430711 TBC1D22BQ9NU19 505 aa7.57□□□□□ -1.2
COL28A1-202ENST00000430711 TMOD2Q9NZR1 351 aa7.57□□□□□ -1.2
COL28A1-202ENST00000430711 AGO2Q9UKV8 859 aaKnown RBP7.57□□□□□ -1.2
COL28A1-202ENST00000430711 AFG3L2Q9Y4W6 797 aa7.57□□□□□ -1.2
COL28A1-202ENST00000430711 ANK1P16157 1881 aa7.57□□□□□ -1.2
COL28A1-202ENST00000430711 LRRD1A4D1F6 860 aa7.56□□□□□ -1.2
COL28A1-202ENST00000430711 EME2A4GXA9 379 aaPredicted RBP7.56□□□□□ -1.2
COL28A1-202ENST00000430711 TMEM191CA6NGB0 347 aa7.56□□□□□ -1.2
COL28A1-202ENST00000430711 EXTL3O43909 919 aa7.56□□□□□ -1.2
COL28A1-202ENST00000430711 UGT1A9O60656 530 aa7.56□□□□□ -1.2
COL28A1-202ENST00000430711 TCEA3O75764 348 aa7.56□□□□□ -1.2
COL28A1-202ENST00000430711 TMEM191BP0C7N4 346 aa7.56□□□□□ -1.2
COL28A1-202ENST00000430711 KRT4P19013 534 aa7.56□□□□□ -1.2
COL28A1-202ENST00000430711 GBP2P32456 591 aaPredicted RBP7.56□□□□□ -1.2
COL28A1-202ENST00000430711 RFC1P35251 1148 aaPredicted RBP7.56□□□□□ -1.2
COL28A1-202ENST00000430711 CDKN2BP42772 138 aa7.56□□□□□ -1.2
COL28A1-202ENST00000430711 CLDN10P78369 228 aa7.56□□□□□ -1.2
COL28A1-202ENST00000430711 GHRHRQ02643 423 aa7.56□□□□□ -1.2
COL28A1-202ENST00000430711 RIPK1Q13546 671 aa7.56□□□□□ -1.2
COL28A1-202ENST00000430711 TMEM132BQ14DG7 1078 aa7.56□□□□□ -1.2
COL28A1-202ENST00000430711 PSMD6Q15008 389 aa7.56□□□□□ -1.2
COL28A1-202ENST00000430711 CTC1Q2NKJ3 1217 aa7.56□□□□□ -1.2
COL28A1-202ENST00000430711 HSF5Q4G112 596 aaPredicted RBP7.56□□□□□ -1.2
COL28A1-202ENST00000430711 ANKRD20A2Q5SQ80 823 aa7.56□□□□□ -1.2
COL28A1-202ENST00000430711 ANKRD20A1Q5TYW2 823 aa7.56□□□□□ -1.2
COL28A1-202ENST00000430711 ANKRD20A3Q5VUR7 823 aa7.56□□□□□ -1.2
COL28A1-202ENST00000430711 SNRNP48Q6IEG0 339 aaKnown RBP7.56□□□□□ -1.2
COL28A1-202ENST00000430711 LVRNQ6Q4G3 990 aa7.56□□□□□ -1.2
COL28A1-202ENST00000430711 CDHR3Q6ZTQ4 885 aa7.56□□□□□ -1.2
COL28A1-202ENST00000430711 NIPA1Q7RTP0 329 aa7.56□□□□□ -1.2
COL28A1-202ENST00000430711 PRPF39Q86UA1 669 aaKnown RBP7.56□□□□□ -1.2
COL28A1-202ENST00000430711 LRRC6Q86X45 466 aa7.56□□□□□ -1.2
COL28A1-202ENST00000430711 RHOT1Q8IXI2 618 aa7.56□□□□□ -1.2
COL28A1-202ENST00000430711 TTLL6Q8N841 843 aa7.56□□□□□ -1.2
COL28A1-202ENST00000430711 NETO2Q8NC67 525 aa7.56□□□□□ -1.2
COL28A1-202ENST00000430711 CPT1BQ92523 772 aa7.56□□□□□ -1.2
COL28A1-202ENST00000430711 P3H4Q92791 437 aa7.56□□□□□ -1.2
COL28A1-202ENST00000430711 KIFAP3Q92845 792 aa7.56□□□□□ -1.2
COL28A1-202ENST00000430711 ZBED3Q96IU2 234 aaPredicted RBP7.56□□□□□ -1.2
COL28A1-202ENST00000430711 TWNKQ96RR1 684 aa7.56□□□□□ -1.2
COL28A1-202ENST00000430711 CXCL16Q9H2A7 254 aa7.56□□□□□ -1.2
COL28A1-202ENST00000430711 TAOK3Q9H2K8 898 aa7.56□□□□□ -1.2
COL28A1-202ENST00000430711 EHMT1Q9H9B1 1298 aa7.56□□□□□ -1.2
COL28A1-202ENST00000430711 UGT1A7Q9HAW7 530 aa7.56□□□□□ -1.2
COL28A1-202ENST00000430711 UGT1A10Q9HAW8 530 aa7.56□□□□□ -1.2
COL28A1-202ENST00000430711 UGT1A8Q9HAW9 530 aa7.56□□□□□ -1.2
COL28A1-202ENST00000430711 PLAC1Q9HBJ0 212 aa7.56□□□□□ -1.2
COL28A1-202ENST00000430711 UBN1Q9NPG3 1134 aa7.56□□□□□ -1.2
COL28A1-202ENST00000430711 CYLDQ9NQC7 956 aa7.56□□□□□ -1.2
COL28A1-202ENST00000430711 ANKEF1Q9NU02 776 aa7.56□□□□□ -1.2
COL28A1-202ENST00000430711 RABGEF1Q9UJ41 708 aa7.56□□□□□ -1.2
COL28A1-202ENST00000430711 ZNF214Q9UL59 606 aaPredicted RBP7.56□□□□□ -1.2
COL28A1-202ENST00000430711 ZNRF3Q9ULT6 936 aa7.56□□□□□ -1.2
COL28A1-202ENST00000430711 CCDC85CA6NKD9 419 aa7.56□□□□□ -1.2
COL28A1-202ENST00000430711 B4GALT5O43286 388 aa7.56□□□□□ -1.2
COL28A1-202ENST00000430711 EDF1O60869 148 aaKnown RBP7.56□□□□□ -1.2
COL28A1-202ENST00000430711 ZBED4O75132 1171 aa7.56□□□□□ -1.2
COL28A1-202ENST00000430711 ASNSP08243 561 aa7.56□□□□□ -1.2
COL28A1-202ENST00000430711 EZRP15311 586 aaKnown RBP7.56□□□□□ -1.2
COL28A1-202ENST00000430711 KRT15P19012 456 aa7.56□□□□□ -1.2
COL28A1-202ENST00000430711 CA4P22748 312 aa7.56□□□□□ -1.2
COL28A1-202ENST00000430711 MMP8P22894 467 aa7.56□□□□□ -1.2
COL28A1-202ENST00000430711 ZNF132P52740 706 aa7.56□□□□□ -1.2
COL28A1-202ENST00000430711 POLGP54098 1239 aaPredicted RBP7.56□□□□□ -1.2
COL28A1-202ENST00000430711 HMGCS2P54868 508 aa7.56□□□□□ -1.2
COL28A1-202ENST00000430711 OTUD4Q01804 1114 aaKnown RBP7.56□□□□□ -1.2
COL28A1-202ENST00000430711 CAPSQ13938 189 aa7.56□□□□□ -1.2
COL28A1-202ENST00000430711 SGSM1Q2NKQ1 1148 aa7.56□□□□□ -1.2
COL28A1-202ENST00000430711 PTPN20Q4JDL3 420 aa7.56□□□□□ -1.2
COL28A1-202ENST00000430711 TAF1BQ53T94 588 aaPredicted RBP7.56□□□□□ -1.2
COL28A1-202ENST00000430711 PPP1R15BQ5SWA1 713 aa7.56□□□□□ -1.2
COL28A1-202ENST00000430711 FAXCQ5TGI0 409 aa7.56□□□□□ -1.2
COL28A1-202ENST00000430711 GPAT2Q6NUI2 795 aa7.56□□□□□ -1.2
COL28A1-202ENST00000430711 ABHD15Q6UXT9 468 aa7.56□□□□□ -1.2
COL28A1-202ENST00000430711 DSTYKQ6XUX3 929 aa7.56□□□□□ -1.2
COL28A1-202ENST00000430711 RFX8Q6ZV50 586 aa7.56□□□□□ -1.2
COL28A1-202ENST00000430711 EEPD1Q7L9B9 569 aa7.56□□□□□ -1.2
COL28A1-202ENST00000430711 PHC3Q8NDX5 983 aa7.56□□□□□ -1.2
COL28A1-202ENST00000430711 EXD1Q8NHP7 514 aa7.56□□□□□ -1.2
COL28A1-202ENST00000430711 FEZF2Q8TBJ5 459 aa7.56□□□□□ -1.2
COL28A1-202ENST00000430711 ACTL9Q8TC94 416 aa7.56□□□□□ -1.2
COL28A1-202ENST00000430711 TRAPPC12Q8WVT3 735 aa7.56□□□□□ -1.2
COL28A1-202ENST00000430711 NRG4Q8WWG1 115 aa7.56□□□□□ -1.2
COL28A1-202ENST00000430711 MS4A4AQ96JQ5 239 aa7.56□□□□□ -1.2
COL28A1-202ENST00000430711 SERAC1Q96JX3 654 aa7.56□□□□□ -1.2
COL28A1-202ENST00000430711 PEBP4Q96S96 227 aa7.56□□□□□ -1.2
COL28A1-202ENST00000430711 PPP1R16BQ96T49 567 aa7.56□□□□□ -1.2
COL28A1-202ENST00000430711 MECRQ9BV79 373 aa7.56□□□□□ -1.2
COL28A1-202ENST00000430711 TBC1D10AQ9BXI6 508 aa7.56□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms