RNA–Protein interactions for RNA: ENST00000430328.6

RIF1-204, Transcript of replication timing regulatory factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene RIF1, Length 7,992 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-204ENST00000430328 VWA5AO00534 786 aa17.1■□□□□ 0.33
RIF1-204ENST00000430328 RUNDC3AQ59EK9 446 aa17.1■□□□□ 0.33
RIF1-204ENST00000430328 EID3Q8N140 333 aa17.1■□□□□ 0.33
RIF1-204ENST00000430328 SOAT2O75908 522 aa17.1■□□□□ 0.33
RIF1-204ENST00000430328 BMP3P12645 472 aa17.1■□□□□ 0.33
RIF1-204ENST00000430328 DRAP1Q14919 205 aaPredicted RBP17.1■□□□□ 0.33
RIF1-204ENST00000430328 NUMA1Q14980 2115 aa17.1■□□□□ 0.33
RIF1-204ENST00000430328 TMEM120BA0PK00 339 aa17.1■□□□□ 0.33
RIF1-204ENST00000430328 NCK2O43639 380 aa17.1■□□□□ 0.33
RIF1-204ENST00000430328 HSD3B2P26439 372 aa17.1■□□□□ 0.33
RIF1-204ENST00000430328 UTP15Q8TED0 518 aaKnown RBP17.1■□□□□ 0.33
RIF1-204ENST00000430328 CHKBQ9Y259 395 aa17.1■□□□□ 0.33
RIF1-204ENST00000430328 RCOR1Q9UKL0 485 aa17.1■□□□□ 0.33
RIF1-204ENST00000430328 PHGDHO43175 533 aaKnown RBP17.1■□□□□ 0.33
RIF1-204ENST00000430328 CYP2D6P10635 497 aa17.1■□□□□ 0.33
RIF1-204ENST00000430328 CASP12Q6UXS9 341 aa17.1■□□□□ 0.33
RIF1-204ENST00000430328 MSANTD1Q6ZTZ1 278 aa17.1■□□□□ 0.33
RIF1-204ENST00000430328 TRPC4APQ8TEL6 797 aa17.1■□□□□ 0.33
RIF1-204ENST00000430328 GSTK1Q9Y2Q3 226 aa17.1■□□□□ 0.33
RIF1-204ENST00000430328 TIMM44O43615 452 aa17.09■□□□□ 0.33
RIF1-204ENST00000430328 ZNF682O95780 498 aa17.09■□□□□ 0.33
RIF1-204ENST00000430328 SERPINB5P36952 375 aa17.09■□□□□ 0.33
RIF1-204ENST00000430328 CPA2P48052 419 aa17.09■□□□□ 0.33
RIF1-204ENST00000430328 RPL19P84098 196 aaKnown RBP17.09■□□□□ 0.33
RIF1-204ENST00000430328 TWF1Q12792 350 aa17.09■□□□□ 0.33
RIF1-204ENST00000430328 SYDE2Q5VT97 1194 aa17.09■□□□□ 0.33
RIF1-204ENST00000430328 ZBTB49Q6ZSB9 765 aa17.09■□□□□ 0.33
RIF1-204ENST00000430328 SH2D3CQ8N5H7 860 aa17.09■□□□□ 0.33
RIF1-204ENST00000430328 C3orf20Q8ND61 904 aa17.09■□□□□ 0.33
RIF1-204ENST00000430328 COMMD8Q9NX08 183 aa17.09■□□□□ 0.33
RIF1-204ENST00000430328 MAP3K20Q9NYL2 800 aaKnown RBP17.09■□□□□ 0.33
RIF1-204ENST00000430328 ZNF222Q9UK12 451 aa17.09■□□□□ 0.33
RIF1-204ENST00000430328 VPS9D1Q9Y2B5 631 aa17.09■□□□□ 0.33
RIF1-204ENST00000430328 PHF2O75151 1096 aa17.09■□□□□ 0.33
RIF1-204ENST00000430328 PABPC1P11940 636 aaKnown RBP17.09■□□□□ 0.33
RIF1-204ENST00000430328 LBPP18428 481 aa17.09■□□□□ 0.33
RIF1-204ENST00000430328 TFE3P19532 575 aaPredicted RBP17.09■□□□□ 0.33
RIF1-204ENST00000430328 MIER2Q8N344 545 aa17.09■□□□□ 0.33
RIF1-204ENST00000430328 CENPIQ92674 756 aaPredicted RBP17.09■□□□□ 0.33
RIF1-204ENST00000430328 CCDC126Q96EE4 140 aa17.09■□□□□ 0.33
RIF1-204ENST00000430328 ZNF333Q96JL9 665 aa17.09■□□□□ 0.33
RIF1-204ENST00000430328 BDH2Q9BUT1 245 aa17.09■□□□□ 0.33
RIF1-204ENST00000430328 WBP11Q9Y2W2 641 aaKnown RBP17.09■□□□□ 0.33
RIF1-204ENST00000430328 PDS5AQ29RF7 1337 aaKnown RBP17.09■□□□□ 0.33
RIF1-204ENST00000430328 CDC25AP30304 524 aa17.09■□□□□ 0.33
RIF1-204ENST00000430328 SMCO1Q147U7 214 aa17.09■□□□□ 0.33
RIF1-204ENST00000430328 CCSAPQ6IQ19 270 aaPredicted RBP17.09■□□□□ 0.33
RIF1-204ENST00000430328 PADI6Q6TGC4 694 aa17.09■□□□□ 0.33
RIF1-204ENST00000430328 ROPN1BQ9BZX4 212 aaPredicted RBP17.09■□□□□ 0.33
RIF1-204ENST00000430328 BHMT2Q9H2M3 363 aa17.09■□□□□ 0.33
RIF1-204ENST00000430328 ROPN1Q9HAT0 212 aaPredicted RBP17.09■□□□□ 0.33
RIF1-204ENST00000430328 TLR7Q9NYK1 1049 aaKnown RBP17.09■□□□□ 0.33
RIF1-204ENST00000430328 ABCC1P33527 1531 aa17.09■□□□□ 0.33
RIF1-204ENST00000430328 FAM58BPP0C7Q3 252 aa17.09■□□□□ 0.33
RIF1-204ENST00000430328 NUAK2Q9H093 628 aa17.09■□□□□ 0.33
RIF1-204ENST00000430328 LCP1P13796 627 aa17.09■□□□□ 0.33
RIF1-204ENST00000430328 SAMD3Q8N6K7 520 aa17.09■□□□□ 0.33
RIF1-204ENST00000430328 EFHD2Q96C19 240 aaPredicted RBP17.09■□□□□ 0.33
RIF1-204ENST00000430328 ACAD9Q9H845 621 aa17.09■□□□□ 0.33
RIF1-204ENST00000430328 ZKSCAN7Q9P0L1 754 aaPredicted RBP17.09■□□□□ 0.33
RIF1-204ENST00000430328 LIMA1Q9UHB6 759 aaKnown RBP17.09■□□□□ 0.33
RIF1-204ENST00000430328 RTN2O75298 545 aa17.09■□□□□ 0.33
RIF1-204ENST00000430328 CORO7P57737 925 aa17.09■□□□□ 0.33
RIF1-204ENST00000430328 EEPD1Q7L9B9 569 aa17.09■□□□□ 0.33
RIF1-204ENST00000430328 CCDC33Q8N5R6 958 aa17.09■□□□□ 0.33
RIF1-204ENST00000430328 FAM213AQ9BRX8 229 aa17.09■□□□□ 0.33
RIF1-204ENST00000430328 MGAT4AQ9UM21 535 aa17.09■□□□□ 0.33
RIF1-204ENST00000430328 TNFAIP8O95379 198 aa17.08■□□□□ 0.33
RIF1-204ENST00000430328 KCTD21Q4G0X4 260 aa17.08■□□□□ 0.33
RIF1-204ENST00000430328 DSN1Q9H410 356 aa17.08■□□□□ 0.33
RIF1-204ENST00000430328 ATPIF1Q9UII2 106 aa17.08■□□□□ 0.33
RIF1-204ENST00000430328 ATG7O95352 703 aa17.08■□□□□ 0.33
RIF1-204ENST00000430328 ATP1A3P13637 1013 aa17.08■□□□□ 0.33
RIF1-204ENST00000430328 AGAP9Q5VTM2 703 aa17.08■□□□□ 0.33
RIF1-204ENST00000430328 EDC3Q96F86 508 aaKnown RBP17.08■□□□□ 0.33
RIF1-204ENST00000430328 EPB41L4BQ9H329 900 aa17.08■□□□□ 0.33
RIF1-204ENST00000430328 PADI4Q9UM07 663 aa17.08■□□□□ 0.33
RIF1-204ENST00000430328 TPRKBQ9Y3C4 175 aa17.08■□□□□ 0.33
RIF1-204ENST00000430328 AATKQ6ZMQ8 1374 aa17.08■□□□□ 0.33
RIF1-204ENST00000430328 ATP10DQ9P241 1426 aa17.08■□□□□ 0.33
RIF1-204ENST00000430328 ATP1A1P05023 1023 aaKnown RBP17.08■□□□□ 0.32
RIF1-204ENST00000430328 PPP2R1BP30154 601 aa17.08■□□□□ 0.32
RIF1-204ENST00000430328 CLEC16AQ2KHT3 1053 aa17.08■□□□□ 0.32
RIF1-204ENST00000430328 TEX46H3BTG2 121 aa17.08■□□□□ 0.32
RIF1-204ENST00000430328 TRIM48Q8IWZ4 208 aa17.08■□□□□ 0.32
RIF1-204ENST00000430328 IQCF2Q8IXL9 164 aa17.08■□□□□ 0.32
RIF1-204ENST00000430328 KANSL2Q9H9L4 492 aa17.08■□□□□ 0.32
RIF1-204ENST00000430328 DDX18Q9NVP1 670 aaKnown RBP17.08■□□□□ 0.32
RIF1-204ENST00000430328 SYNPO2Q9UMS6 1093 aa17.08■□□□□ 0.32
RIF1-204ENST00000430328 MAPK1P28482 360 aa17.08■□□□□ 0.32
RIF1-204ENST00000430328 GALNTL6Q49A17 601 aa17.08■□□□□ 0.32
RIF1-204ENST00000430328 TMEM63BQ5T3F8 832 aa17.08■□□□□ 0.32
RIF1-204ENST00000430328 ZNF746Q6NUN9 644 aaPredicted RBP17.08■□□□□ 0.32
RIF1-204ENST00000430328 SCFD2Q8WU76 684 aa17.08■□□□□ 0.32
RIF1-204ENST00000430328 WWOXQ9NZC7 414 aa17.08■□□□□ 0.32
RIF1-204ENST00000430328 MYL12BO14950 172 aa17.08■□□□□ 0.32
RIF1-204ENST00000430328 CACNA2D1P54289 1103 aa17.08■□□□□ 0.32
RIF1-204ENST00000430328 TTLL9Q3SXZ7 439 aa17.08■□□□□ 0.32
RIF1-204ENST00000430328 TIMM50Q3ZCQ8 353 aa17.08■□□□□ 0.32
RIF1-204ENST00000430328 MZT2AQ6P582 158 aa17.08■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 10.3 ms