RNA–Protein interactions for RNA: ENST00000430158.5

USP40-205, Transcript of ubiquitin specific peptidase 40, humanhuman

TSL 3

Gene USP40, Length 1,047 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP40-205ENST00000430158 CA8P35219 290 aa13.27□□□□□ -0.29
USP40-205ENST00000430158 CUL2Q13617 745 aa13.27□□□□□ -0.29
USP40-205ENST00000430158 TRIM65Q6PJ69 517 aa13.27□□□□□ -0.29
USP40-205ENST00000430158 SCARA5Q6ZMJ2 495 aa13.27□□□□□ -0.29
USP40-205ENST00000430158 CREBRFQ8IUR6 639 aa13.27□□□□□ -0.29
USP40-205ENST00000430158 CRYBG2Q8N1P7 616 aa13.27□□□□□ -0.29
USP40-205ENST00000430158 THEM5Q8N1Q8 247 aa13.27□□□□□ -0.29
USP40-205ENST00000430158 ATAD1Q8NBU5 361 aa13.27□□□□□ -0.29
USP40-205ENST00000430158 CMASQ8NFW8 434 aaPredicted RBP13.27□□□□□ -0.29
USP40-205ENST00000430158 CASP10Q92851 521 aa13.27□□□□□ -0.29
USP40-205ENST00000430158 ZNF707Q96C28 371 aaPredicted RBP13.27□□□□□ -0.29
USP40-205ENST00000430158 ELOVL4Q9GZR5 314 aa13.27□□□□□ -0.29
USP40-205ENST00000430158 TSPY26PQ9H489 355 aa13.27□□□□□ -0.29
USP40-205ENST00000430158 DPEP3Q9H4B8 488 aa13.27□□□□□ -0.29
USP40-205ENST00000430158 PLEKHA4Q9H4M7 779 aa13.27□□□□□ -0.29
USP40-205ENST00000430158 FAM124BQ9H5Z6 455 aaPredicted RBP13.27□□□□□ -0.29
USP40-205ENST00000430158 CLDND1Q9NY35 253 aa13.27□□□□□ -0.29
USP40-205ENST00000430158 CDH9Q9ULB4 789 aa13.27□□□□□ -0.29
USP40-205ENST00000430158 MYH10P35580 1976 aa13.27□□□□□ -0.29
USP40-205ENST00000430158 LGALS16A8MUM7 142 aa13.26□□□□□ -0.29
USP40-205ENST00000430158 ZMYND10O75800 440 aa13.26□□□□□ -0.29
USP40-205ENST00000430158 PDGFRBP09619 1106 aa13.26□□□□□ -0.29
USP40-205ENST00000430158 P4HA1P13674 534 aa13.26□□□□□ -0.29
USP40-205ENST00000430158 HOXB1P14653 301 aaPredicted RBP13.26□□□□□ -0.29
USP40-205ENST00000430158 PCSK1P29120 753 aa13.26□□□□□ -0.29
USP40-205ENST00000430158 NDST1P52848 882 aa13.26□□□□□ -0.29
USP40-205ENST00000430158 ARPP19P56211 112 aa13.26□□□□□ -0.29
USP40-205ENST00000430158 GCNT1Q02742 428 aa13.26□□□□□ -0.29
USP40-205ENST00000430158 LRMPQ12912 555 aa13.26□□□□□ -0.29
USP40-205ENST00000430158 EXOC3L4Q17RC7 722 aa13.26□□□□□ -0.29
USP40-205ENST00000430158 SLC39A12Q504Y0 691 aa13.26□□□□□ -0.29
USP40-205ENST00000430158 WDR44Q5JSH3 913 aa13.26□□□□□ -0.29
USP40-205ENST00000430158 GBP6Q6ZN66 633 aa13.26□□□□□ -0.29
USP40-205ENST00000430158 PAQR9Q6ZVX9 377 aa13.26□□□□□ -0.29
USP40-205ENST00000430158 UNC93AQ86WB7 457 aa13.26□□□□□ -0.29
USP40-205ENST00000430158 TTC9BQ8N6N2 239 aa13.26□□□□□ -0.29
USP40-205ENST00000430158 C12orf76Q8N812 135 aaPredicted RBP13.26□□□□□ -0.29
USP40-205ENST00000430158 OR6B3Q8NGW1 331 aa13.26□□□□□ -0.29
USP40-205ENST00000430158 HLA-CQ95604 372 aa13.26□□□□□ -0.29
USP40-205ENST00000430158 NT5C1BQ96P26 610 aa13.26□□□□□ -0.29
USP40-205ENST00000430158 SYT15Q9BQS2 421 aa13.26□□□□□ -0.29
USP40-205ENST00000430158 RHOBTB2Q9BYZ6 727 aa13.26□□□□□ -0.29
USP40-205ENST00000430158 IMPG2Q9BZV3 1241 aa13.26□□□□□ -0.29
USP40-205ENST00000430158 VPS16Q9H269 839 aa13.26□□□□□ -0.29
USP40-205ENST00000430158 MAN1C1Q9NR34 630 aa13.26□□□□□ -0.29
USP40-205ENST00000430158 CISHQ9NSE2 258 aa13.26□□□□□ -0.29
USP40-205ENST00000430158 DZANK1Q9NVP4 752 aa13.26□□□□□ -0.29
USP40-205ENST00000430158 GCNT4Q9P109 453 aa13.26□□□□□ -0.29
USP40-205ENST00000430158 HSFX1Q9UBD0 423 aa13.26□□□□□ -0.29
USP40-205ENST00000430158 AJAP1Q9UKB5 411 aaPredicted RBP13.26□□□□□ -0.29
USP40-205ENST00000430158 GTF3C4Q9UKN8 822 aa13.26□□□□□ -0.29
USP40-205ENST00000430158 COG5Q9UP83 839 aa13.26□□□□□ -0.29
USP40-205ENST00000430158 CNTN6Q9UQ52 1028 aa13.26□□□□□ -0.29
USP40-205ENST00000430158 SIK3Q9Y2K2 1263 aa13.26□□□□□ -0.29
USP40-205ENST00000430158 ZNF638Q14966 1978 aaKnown RBP13.25□□□□□ -0.29
USP40-205ENST00000430158 RFPL2O75678 378 aa13.25□□□□□ -0.29
USP40-205ENST00000430158 NOL4O94818 638 aa13.25□□□□□ -0.29
USP40-205ENST00000430158 POU2F2P09086 479 aa13.25□□□□□ -0.29
USP40-205ENST00000430158 HOXB8P17481 243 aaPredicted RBP13.25□□□□□ -0.29
USP40-205ENST00000430158 PTPN1P18031 435 aaKnown RBP13.25□□□□□ -0.29
USP40-205ENST00000430158 RAD23BP54727 409 aa13.25□□□□□ -0.29
USP40-205ENST00000430158 PSMC1P62191 440 aaKnown RBP13.25□□□□□ -0.29
USP40-205ENST00000430158 ADCY1Q08828 1119 aa13.25□□□□□ -0.29
USP40-205ENST00000430158 CETN1Q12798 172 aa13.25□□□□□ -0.29
USP40-205ENST00000430158 SMARCB1Q12824 385 aa13.25□□□□□ -0.29
USP40-205ENST00000430158 UVSSAQ2YD98 709 aa13.25□□□□□ -0.29
USP40-205ENST00000430158 LEXMQ3ZCV2 418 aa13.25□□□□□ -0.29
USP40-205ENST00000430158 GJB7Q6PEY0 223 aa13.25□□□□□ -0.29
USP40-205ENST00000430158 RTL10Q7L3V2 364 aa13.25□□□□□ -0.29
USP40-205ENST00000430158 GAS2L3Q86XJ1 694 aa13.25□□□□□ -0.29
USP40-205ENST00000430158 DCP1BQ8IZD4 617 aaKnown RBP13.25□□□□□ -0.29
USP40-205ENST00000430158 SMRP1Q8NCR6 262 aa13.25□□□□□ -0.29
USP40-205ENST00000430158 MYCBPAPQ8TBZ2 947 aa13.25□□□□□ -0.29
USP40-205ENST00000430158 SUSD6Q92537 303 aa13.25□□□□□ -0.29
USP40-205ENST00000430158 NAP1L5Q96NT1 182 aaPredicted RBP13.25□□□□□ -0.29
USP40-205ENST00000430158 PGLYRP2Q96PD5 576 aa13.25□□□□□ -0.29
USP40-205ENST00000430158 NAA15Q9BXJ9 866 aaKnown RBP13.25□□□□□ -0.29
USP40-205ENST00000430158 SNX25Q9H3E2 840 aa13.25□□□□□ -0.29
USP40-205ENST00000430158 RTN4Q9NQC3 1192 aaKnown RBP13.25□□□□□ -0.29
USP40-205ENST00000430158 TMEM30AQ9NV96 361 aa13.25□□□□□ -0.29
USP40-205ENST00000430158 A0A0C4DFX4 3053 aa13.24□□□□□ -0.29
USP40-205ENST00000430158 MYO10Q9HD67 2058 aa13.24□□□□□ -0.29
USP40-205ENST00000430158 DENND4CQ5VZ89 1909 aa13.24□□□□□ -0.29
USP40-205ENST00000430158 A0A1B0GTH6 734 aa13.24□□□□□ -0.29
USP40-205ENST00000430158 GRXCR2A6NFK2 248 aa13.24□□□□□ -0.29
USP40-205ENST00000430158 A8MXQ7 604 aa13.24□□□□□ -0.29
USP40-205ENST00000430158 H3BQ06 376 aaPredicted RBP13.24□□□□□ -0.29
USP40-205ENST00000430158 RNF225M0QZC1 329 aaPredicted RBP13.24□□□□□ -0.29
USP40-205ENST00000430158 TEX33O43247 280 aa13.24□□□□□ -0.29
USP40-205ENST00000430158 HAPLN1P10915 354 aaPredicted RBP13.24□□□□□ -0.29
USP40-205ENST00000430158 CPB1P15086 417 aa13.24□□□□□ -0.29
USP40-205ENST00000430158 KCNA5P22460 613 aa13.24□□□□□ -0.29
USP40-205ENST00000430158 TBXAS1P24557 533 aaPredicted RBP13.24□□□□□ -0.29
USP40-205ENST00000430158 HOXA9P31269 272 aa13.24□□□□□ -0.29
USP40-205ENST00000430158 KLK7P49862 253 aa13.24□□□□□ -0.29
USP40-205ENST00000430158 CDR1P51861 262 aa13.24□□□□□ -0.29
USP40-205ENST00000430158 ZNF132P52740 706 aa13.24□□□□□ -0.29
USP40-205ENST00000430158 TSPY1Q01534 308 aa13.24□□□□□ -0.29
USP40-205ENST00000430158 TFF2Q03403 129 aa13.24□□□□□ -0.29
USP40-205ENST00000430158 DUSP4Q13115 394 aa13.24□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms