RNA–Protein interactions for RNA: ENST00000430071.6

UBE3D-204, Transcript of ubiquitin protein ligase E3D, humanhuman

TSL 5

Gene UBE3D, Length 1,352 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3D-204ENST00000430071 CGNQ9P2M7 1197 aaKnown RBP18.2■□□□□ 0.5
UBE3D-204ENST00000430071 TRAF3IP3Q9Y228 551 aa18.2■□□□□ 0.5
UBE3D-204ENST00000430071 ECI2O75521 394 aa18.19■□□□□ 0.5
UBE3D-204ENST00000430071 PAX3P23760 479 aa18.19■□□□□ 0.5
UBE3D-204ENST00000430071 METTL23Q86XA0 190 aa18.19■□□□□ 0.5
UBE3D-204ENST00000430071 CACTINQ8WUQ7 758 aaKnown RBP18.19■□□□□ 0.5
UBE3D-204ENST00000430071 ZNF560Q96MR9 790 aa18.19■□□□□ 0.5
UBE3D-204ENST00000430071 SEPT5Q99719 369 aaPredicted RBP18.19■□□□□ 0.5
UBE3D-204ENST00000430071 MKNK1Q9BUB5 465 aa18.19■□□□□ 0.5
UBE3D-204ENST00000430071 CFAP54Q96N23 3096 aa18.19■□□□□ 0.5
UBE3D-204ENST00000430071 ZNF233A6NK53 670 aa18.18■□□□□ 0.5
UBE3D-204ENST00000430071 KIAA0391O15091 583 aaKnown RBP18.18■□□□□ 0.5
UBE3D-204ENST00000430071 NR3C1P04150 777 aa18.18■□□□□ 0.5
UBE3D-204ENST00000430071 TMEM191BP0C7N4 346 aa18.18■□□□□ 0.5
UBE3D-204ENST00000430071 ALDH1A3P47895 512 aa18.18■□□□□ 0.5
UBE3D-204ENST00000430071 EPHB3P54753 998 aa18.18■□□□□ 0.5
UBE3D-204ENST00000430071 STARD6P59095 220 aa18.18■□□□□ 0.5
UBE3D-204ENST00000430071 MLF2Q15773 248 aaPredicted RBP18.18■□□□□ 0.5
UBE3D-204ENST00000430071 DPCR1Q3MIW9 517 aa18.18■□□□□ 0.5
UBE3D-204ENST00000430071 MGAT5BQ3V5L5 792 aa18.18■□□□□ 0.5
UBE3D-204ENST00000430071 SDHAF4Q5VUM1 108 aa18.18■□□□□ 0.5
UBE3D-204ENST00000430071 KLHL10Q6JEL2 608 aa18.18■□□□□ 0.5
UBE3D-204ENST00000430071 PHLDB3Q6NSJ2 640 aa18.18■□□□□ 0.5
UBE3D-204ENST00000430071 VITQ6UXI7 678 aa18.18■□□□□ 0.5
UBE3D-204ENST00000430071 SLC9A9Q8IVB4 645 aa18.18■□□□□ 0.5
UBE3D-204ENST00000430071 THEM5Q8N1Q8 247 aa18.18■□□□□ 0.5
UBE3D-204ENST00000430071 ZSCAN18Q8TBC5 510 aaPredicted RBP18.18■□□□□ 0.5
UBE3D-204ENST00000430071 PLEKHO2Q8TD55 490 aa18.18■□□□□ 0.5
UBE3D-204ENST00000430071 TMEM174Q8WUU8 243 aa18.18■□□□□ 0.5
UBE3D-204ENST00000430071 ZNF516Q92618 1163 aa18.18■□□□□ 0.5
UBE3D-204ENST00000430071 ELSPBP1Q96BH3 223 aa18.18■□□□□ 0.5
UBE3D-204ENST00000430071 ABI2Q9NYB9 513 aaPredicted RBP18.18■□□□□ 0.5
UBE3D-204ENST00000430071 ITGA11Q9UKX5 1188 aa18.18■□□□□ 0.5
UBE3D-204ENST00000430071 DSEQ9UL01 958 aa18.18■□□□□ 0.5
UBE3D-204ENST00000430071 SNX9Q9Y5X1 595 aa18.18■□□□□ 0.5
UBE3D-204ENST00000430071 MYOFQ9NZM1 2061 aa18.18■□□□□ 0.5
UBE3D-204ENST00000430071 EP300Q09472 2414 aaPredicted RBP18.18■□□□□ 0.5
UBE3D-204ENST00000430071 TRIM49BA6NDI0 452 aa18.17■□□□□ 0.5
UBE3D-204ENST00000430071 PSMA7O14818 248 aa18.17■□□□□ 0.5
UBE3D-204ENST00000430071 CALUO43852 315 aaPredicted RBP18.17■□□□□ 0.5
UBE3D-204ENST00000430071 ATP2C2O75185 946 aa18.17■□□□□ 0.5
UBE3D-204ENST00000430071 MICAL2O94851 1124 aa18.17■□□□□ 0.5
UBE3D-204ENST00000430071 CST3P01034 146 aaPredicted RBP18.17■□□□□ 0.5
UBE3D-204ENST00000430071 HAPLN1P10915 354 aaPredicted RBP18.17■□□□□ 0.5
UBE3D-204ENST00000430071 CCNE1P24864 410 aa18.17■□□□□ 0.5
UBE3D-204ENST00000430071 NLRP12P59046 1061 aa18.17■□□□□ 0.5
UBE3D-204ENST00000430071 STIM1Q13586 685 aa18.17■□□□□ 0.5
UBE3D-204ENST00000430071 SOWAHAQ2M3V2 549 aa18.17■□□□□ 0.5
UBE3D-204ENST00000430071 ANKRD40Q6AI12 368 aa18.17■□□□□ 0.5
UBE3D-204ENST00000430071 XXYLT1Q8NBI6 393 aa18.17■□□□□ 0.5
UBE3D-204ENST00000430071 PSMG2Q969U7 264 aa18.17■□□□□ 0.5
UBE3D-204ENST00000430071 DHTKD1Q96HY7 919 aaPredicted RBP18.17■□□□□ 0.5
UBE3D-204ENST00000430071 LRRC3BQ96PB8 259 aa18.17■□□□□ 0.5
UBE3D-204ENST00000430071 PI4K2AQ9BTU6 479 aa18.17■□□□□ 0.5
UBE3D-204ENST00000430071 DDX23Q9BUQ8 820 aaKnown RBP18.17■□□□□ 0.5
UBE3D-204ENST00000430071 IL21Q9HBE4 155 aa18.17■□□□□ 0.5
UBE3D-204ENST00000430071 ZFP14Q9HCL3 533 aa18.17■□□□□ 0.5
UBE3D-204ENST00000430071 HEBP1Q9NRV9 189 aa18.17■□□□□ 0.5
UBE3D-204ENST00000430071 SIT1Q9Y3P8 196 aa18.17■□□□□ 0.5
UBE3D-204ENST00000430071 NME7Q9Y5B8 376 aa18.17■□□□□ 0.5
UBE3D-204ENST00000430071 SPTBN4Q9H254 2564 aa18.17■□□□□ 0.5
UBE3D-204ENST00000430071 HELZP42694 1942 aaKnown RBP18.17■□□□□ 0.5
UBE3D-204ENST00000430071 RFX1P22670 979 aa18.17■□□□□ 0.5
UBE3D-204ENST00000430071 GABRR2P28476 465 aa18.17■□□□□ 0.5
UBE3D-204ENST00000430071 PPP1R2P41236 205 aa18.17■□□□□ 0.5
UBE3D-204ENST00000430071 PNPLA4P41247 253 aa18.17■□□□□ 0.5
UBE3D-204ENST00000430071 CASP4P49662 377 aa18.17■□□□□ 0.5
UBE3D-204ENST00000430071 NUBP1P53384 320 aa18.17■□□□□ 0.5
UBE3D-204ENST00000430071 RBP5P82980 135 aa18.17■□□□□ 0.5
UBE3D-204ENST00000430071 CYP4F8P98187 520 aa18.17■□□□□ 0.5
UBE3D-204ENST00000430071 ANGPT1Q15389 498 aa18.17■□□□□ 0.5
UBE3D-204ENST00000430071 SNRNP35Q16560 246 aaKnown RBP18.17■□□□□ 0.5
UBE3D-204ENST00000430071 NFIL3Q16649 462 aa18.17■□□□□ 0.5
UBE3D-204ENST00000430071 LRRC52Q8N7C0 313 aa18.17■□□□□ 0.5
UBE3D-204ENST00000430071 MLKLQ8NB16 471 aa18.17■□□□□ 0.5
UBE3D-204ENST00000430071 PJA1Q8NG27 643 aa18.17■□□□□ 0.5
UBE3D-204ENST00000430071 NELFBQ8WX92 580 aa18.17■□□□□ 0.5
UBE3D-204ENST00000430071 SMARCD2Q92925 531 aa18.17■□□□□ 0.5
UBE3D-204ENST00000430071 ELMO3Q96BJ8 720 aa18.17■□□□□ 0.5
UBE3D-204ENST00000430071 ANKRD36BP1Q96IX9 119 aa18.17■□□□□ 0.5
UBE3D-204ENST00000430071 PKMYT1Q99640 499 aa18.17■□□□□ 0.5
UBE3D-204ENST00000430071 SLITRK6Q9H5Y7 841 aa18.17■□□□□ 0.5
UBE3D-204ENST00000430071 GDAP2Q9NXN4 497 aa18.17■□□□□ 0.5
UBE3D-204ENST00000430071 DDX43Q9NXZ2 648 aaKnown RBP18.17■□□□□ 0.5
UBE3D-204ENST00000430071 GTF3C4Q9UKN8 822 aa18.17■□□□□ 0.5
UBE3D-204ENST00000430071 CTNND2Q9UQB3 1225 aa18.17■□□□□ 0.5
UBE3D-204ENST00000430071 HEPACAM2A8MVW5 462 aa18.16■□□□□ 0.5
UBE3D-204ENST00000430071 EXOC3O60645 756 aa18.16■□□□□ 0.5
UBE3D-204ENST00000430071 HUS1O60921 280 aa18.16■□□□□ 0.5
UBE3D-204ENST00000430071 DLATP10515 647 aaKnown RBP18.16■□□□□ 0.5
UBE3D-204ENST00000430071 NR2F2P24468 414 aa18.16■□□□□ 0.5
UBE3D-204ENST00000430071 LMO2P25791 158 aa18.16■□□□□ 0.5
UBE3D-204ENST00000430071 CYP24A1Q07973 514 aa18.16■□□□□ 0.5
UBE3D-204ENST00000430071 PLD1Q13393 1074 aa18.16■□□□□ 0.5
UBE3D-204ENST00000430071 SKOR2Q2VWA4 1001 aaPredicted RBP18.16■□□□□ 0.5
UBE3D-204ENST00000430071 EDRF1Q3B7T1 1238 aa18.16■□□□□ 0.5
UBE3D-204ENST00000430071 TTI2Q6NXR4 508 aa18.16■□□□□ 0.5
UBE3D-204ENST00000430071 TRAPPC11Q7Z392 1133 aa18.16■□□□□ 0.5
UBE3D-204ENST00000430071 KBTBD7Q8WVZ9 684 aa18.16■□□□□ 0.5
UBE3D-204ENST00000430071 SYAP1Q96A49 352 aaPredicted RBP18.16■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms