RNA–Protein interactions for RNA: ENST00000430038.5

CPSF4-203, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 5

Gene CPSF4, Length 735 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-203ENST00000430038 GDAP2Q9NXN4 497 aa18.39■□□□□ 0.53
CPSF4-203ENST00000430038 DDX43Q9NXZ2 648 aaKnown RBP18.39■□□□□ 0.53
CPSF4-203ENST00000430038 HSPBP1Q9NZL4 362 aa18.39■□□□□ 0.53
CPSF4-203ENST00000430038 GTF3C4Q9UKN8 822 aa18.39■□□□□ 0.53
CPSF4-203ENST00000430038 CCL26Q9Y258 94 aa18.39■□□□□ 0.53
CPSF4-203ENST00000430038 SNX9Q9Y5X1 595 aa18.39■□□□□ 0.53
CPSF4-203ENST00000430038 MYBPHLA2RUH7 354 aa18.38■□□□□ 0.53
CPSF4-203ENST00000430038 OTOL1A6NHN0 477 aaPredicted RBP18.38■□□□□ 0.53
CPSF4-203ENST00000430038 MAN2B1O00754 1011 aa18.38■□□□□ 0.53
CPSF4-203ENST00000430038 GABRDO14764 452 aa18.38■□□□□ 0.53
CPSF4-203ENST00000430038 TADA3O75528 432 aa18.38■□□□□ 0.53
CPSF4-203ENST00000430038 F13A1P00488 732 aa18.38■□□□□ 0.53
CPSF4-203ENST00000430038 CST3P01034 146 aaPredicted RBP18.38■□□□□ 0.53
CPSF4-203ENST00000430038 KRT19P08727 400 aa18.38■□□□□ 0.53
CPSF4-203ENST00000430038 ZSCAN22P10073 491 aaPredicted RBP18.38■□□□□ 0.53
CPSF4-203ENST00000430038 LMO2P25791 158 aa18.38■□□□□ 0.53
CPSF4-203ENST00000430038 ITIH5Q86UX2 942 aa18.38■□□□□ 0.53
CPSF4-203ENST00000430038 GRAMD1CQ8IYS0 662 aa18.38■□□□□ 0.53
CPSF4-203ENST00000430038 LRRC52Q8N7C0 313 aa18.38■□□□□ 0.53
CPSF4-203ENST00000430038 C2orf15Q8WU43 125 aaKnown RBP18.38■□□□□ 0.53
CPSF4-203ENST00000430038 CACTINQ8WUQ7 758 aaKnown RBP18.38■□□□□ 0.53
CPSF4-203ENST00000430038 SCFD1Q8WVM8 642 aa18.38■□□□□ 0.53
CPSF4-203ENST00000430038 KBTBD7Q8WVZ9 684 aa18.38■□□□□ 0.53
CPSF4-203ENST00000430038 CHFRQ96EP1 664 aa18.38■□□□□ 0.53
CPSF4-203ENST00000430038 ZNF560Q96MR9 790 aa18.38■□□□□ 0.53
CPSF4-203ENST00000430038 ZNF396Q96N95 335 aaPredicted RBP18.38■□□□□ 0.53
CPSF4-203ENST00000430038 ACBD6Q9BR61 282 aa18.38■□□□□ 0.53
CPSF4-203ENST00000430038 SEMA4AQ9H3S1 761 aa18.38■□□□□ 0.53
CPSF4-203ENST00000430038 ITGA11Q9UKX5 1188 aa18.38■□□□□ 0.53
CPSF4-203ENST00000430038 PCDHB5Q9Y5E4 795 aa18.38■□□□□ 0.53
CPSF4-203ENST00000430038 CLIC2O15247 247 aa18.37■□□□□ 0.53
CPSF4-203ENST00000430038 POLR2DO15514 142 aaKnown RBP18.37■□□□□ 0.53
CPSF4-203ENST00000430038 LILRB5O75023 590 aa18.37■□□□□ 0.53
CPSF4-203ENST00000430038 PRPF40AO75400 957 aaKnown RBP18.37■□□□□ 0.53
CPSF4-203ENST00000430038 WEE1P30291 646 aa18.37■□□□□ 0.53
CPSF4-203ENST00000430038 PNPLA4P41247 253 aa18.37■□□□□ 0.53
CPSF4-203ENST00000430038 MAGEA9P43362 315 aa18.37■□□□□ 0.53
CPSF4-203ENST00000430038 NLRP12P59046 1061 aa18.37■□□□□ 0.53
CPSF4-203ENST00000430038 ASIC1P78348 528 aa18.37■□□□□ 0.53
CPSF4-203ENST00000430038 INTS6LQ5JSJ4 861 aaKnown RBP18.37■□□□□ 0.53
CPSF4-203ENST00000430038 TXNDC8Q6A555 127 aa18.37■□□□□ 0.53
CPSF4-203ENST00000430038 DCP1BQ8IZD4 617 aaKnown RBP18.37■□□□□ 0.53
CPSF4-203ENST00000430038 RDH13Q8NBN7 331 aa18.37■□□□□ 0.53
CPSF4-203ENST00000430038 ZNF516Q92618 1163 aa18.37■□□□□ 0.53
CPSF4-203ENST00000430038 E2F7Q96AV8 911 aa18.37■□□□□ 0.53
CPSF4-203ENST00000430038 MRPS17Q9Y2R5 130 aaKnown RBP18.37■□□□□ 0.53
CPSF4-203ENST00000430038 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP18.36■□□□□ 0.53
CPSF4-203ENST00000430038 NCAM2O15394 837 aa18.36■□□□□ 0.53
CPSF4-203ENST00000430038 HUS1O60921 280 aa18.36■□□□□ 0.53
CPSF4-203ENST00000430038 RBP5P82980 135 aa18.36■□□□□ 0.53
CPSF4-203ENST00000430038 DMWDQ09019 674 aa18.36■□□□□ 0.53
CPSF4-203ENST00000430038 SMARCB1Q12824 385 aa18.36■□□□□ 0.53
CPSF4-203ENST00000430038 CUL4BQ13620 913 aa18.36■□□□□ 0.53
CPSF4-203ENST00000430038 Q6ZS52 159 aa18.36■□□□□ 0.53
CPSF4-203ENST00000430038 NELFCDQ8IXH7 590 aa18.36■□□□□ 0.53
CPSF4-203ENST00000430038 KIAA2013Q8IYS2 634 aa18.36■□□□□ 0.53
CPSF4-203ENST00000430038 CMTM8Q8IZV2 173 aa18.36■□□□□ 0.53
CPSF4-203ENST00000430038 MAB21L3Q8N8X9 362 aa18.36■□□□□ 0.53
CPSF4-203ENST00000430038 PLEKHO2Q8TD55 490 aa18.36■□□□□ 0.53
CPSF4-203ENST00000430038 USP13Q92995 863 aaPredicted RBP18.36■□□□□ 0.53
CPSF4-203ENST00000430038 SLC22A12Q96S37 553 aa18.36■□□□□ 0.53
CPSF4-203ENST00000430038 AGPAT3Q9NRZ7 376 aa18.36■□□□□ 0.53
CPSF4-203ENST00000430038 ZNF233A6NK53 670 aa18.35■□□□□ 0.53
CPSF4-203ENST00000430038 SPECC1L-ADORA2AF8WAN1 911 aa18.35■□□□□ 0.53
CPSF4-203ENST00000430038 EIF3DO15371 548 aaKnown RBP eCLIP18.35■□□□□ 0.53
CPSF4-203ENST00000430038 TMEM191BP0C7N4 346 aa18.35■□□□□ 0.53
CPSF4-203ENST00000430038 CDC25CP30307 473 aa18.35■□□□□ 0.53
CPSF4-203ENST00000430038 MLLT6P55198 1093 aaPredicted RBP18.35■□□□□ 0.53
CPSF4-203ENST00000430038 SATB1Q01826 763 aa18.35■□□□□ 0.53
CPSF4-203ENST00000430038 DNM1Q05193 864 aaKnown RBP18.35■□□□□ 0.53
CPSF4-203ENST00000430038 ARHGAP15Q53QZ3 475 aa18.35■□□□□ 0.53
CPSF4-203ENST00000430038 FAM26FQ5R3K3 315 aa18.35■□□□□ 0.53
CPSF4-203ENST00000430038 RESP18Q5W5W9 173 aa18.35■□□□□ 0.53
CPSF4-203ENST00000430038 TRIM68Q6AZZ1 485 aa18.35■□□□□ 0.53
CPSF4-203ENST00000430038 FAM171BQ6P995 826 aa18.35■□□□□ 0.53
CPSF4-203ENST00000430038 MAMSTRQ6ZN01 415 aa18.35■□□□□ 0.53
CPSF4-203ENST00000430038 YAF2Q8IY57 180 aa18.35■□□□□ 0.53
CPSF4-203ENST00000430038 ADGRF2Q8IZF7 708 aa18.35■□□□□ 0.53
CPSF4-203ENST00000430038 TOP6BLQ8N6T0 577 aa18.35■□□□□ 0.53
CPSF4-203ENST00000430038 IQUBQ8NA54 791 aa18.35■□□□□ 0.53
CPSF4-203ENST00000430038 BPIFB1Q8TDL5 484 aa18.35■□□□□ 0.53
CPSF4-203ENST00000430038 LEO1Q8WVC0 666 aaPredicted RBP18.35■□□□□ 0.53
CPSF4-203ENST00000430038 HPDLQ96IR7 371 aa18.35■□□□□ 0.53
CPSF4-203ENST00000430038 CYP2S1Q96SQ9 504 aa18.35■□□□□ 0.53
CPSF4-203ENST00000430038 CUEDC2Q9H467 287 aa18.35■□□□□ 0.53
CPSF4-203ENST00000430038 CRTAC1Q9NQ79 661 aa18.35■□□□□ 0.53
CPSF4-203ENST00000430038 HPS4Q9NQG7 708 aa18.35■□□□□ 0.53
CPSF4-203ENST00000430038 GKN1Q9NS71 199 aa18.35■□□□□ 0.53
CPSF4-203ENST00000430038 ZSCAN32Q9NX65 697 aa18.35■□□□□ 0.53
CPSF4-203ENST00000430038 OBP2AQ9NY56 170 aa18.35■□□□□ 0.53
CPSF4-203ENST00000430038 MAGED2Q9UNF1 606 aaPredicted RBP18.35■□□□□ 0.53
CPSF4-203ENST00000430038 SDK1Q7Z5N4 2213 aa18.35■□□□□ 0.53
CPSF4-203ENST00000430038 KLRC4O43908 158 aa18.34■□□□□ 0.53
CPSF4-203ENST00000430038 FGF19O95750 216 aa18.34■□□□□ 0.53
CPSF4-203ENST00000430038 CTHP32929 405 aa18.34■□□□□ 0.53
CPSF4-203ENST00000430038 AFMP43652 599 aa18.34■□□□□ 0.53
CPSF4-203ENST00000430038 KPNA1P52294 538 aaPredicted RBP18.34■□□□□ 0.53
CPSF4-203ENST00000430038 PSMC1P62191 440 aaKnown RBP18.34■□□□□ 0.53
CPSF4-203ENST00000430038 TSPY1Q01534 308 aa18.34■□□□□ 0.53
CPSF4-203ENST00000430038 VEPH1Q14D04 833 aa18.34■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms