RNA–Protein interactions for RNA: ENST00000429836.5

SEMA4D-209, Transcript of semaphorin 4D, humanhuman

TSL 2

Gene SEMA4D, Length 2,895 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4D-209ENST00000429836 ADARP55265 1226 aaKnown RBP11.63□□□□□ -0.55
SEMA4D-209ENST00000429836 GSTO1P78417 241 aa11.63□□□□□ -0.55
SEMA4D-209ENST00000429836 SFSWAPQ12872 951 aaKnown RBP11.63□□□□□ -0.55
SEMA4D-209ENST00000429836 ITPK1Q13572 414 aa11.63□□□□□ -0.55
SEMA4D-209ENST00000429836 NFIL3Q16649 462 aa11.63□□□□□ -0.55
SEMA4D-209ENST00000429836 KLHDC10Q6PID8 442 aa11.63□□□□□ -0.55
SEMA4D-209ENST00000429836 CEP70Q8NHQ1 597 aa11.63□□□□□ -0.55
SEMA4D-209ENST00000429836 SLC26A7Q8TE54 656 aa11.63□□□□□ -0.55
SEMA4D-209ENST00000429836 GDPD5Q8WTR4 605 aa11.63□□□□□ -0.55
SEMA4D-209ENST00000429836 DGCR14Q96DF8 476 aaKnown RBP11.63□□□□□ -0.55
SEMA4D-209ENST00000429836 FAM84AQ96KN4 292 aa11.63□□□□□ -0.55
SEMA4D-209ENST00000429836 POLR3CQ9BUI4 534 aaPredicted RBP11.63□□□□□ -0.55
SEMA4D-209ENST00000429836 MECRQ9BV79 373 aa11.63□□□□□ -0.55
SEMA4D-209ENST00000429836 C10orf88Q9H8K7 445 aa11.63□□□□□ -0.55
SEMA4D-209ENST00000429836 PTTG2Q9NZH5 202 aa11.63□□□□□ -0.55
SEMA4D-209ENST00000429836 CCDC195A0A1B0GUA6 201 aa11.63□□□□□ -0.55
SEMA4D-209ENST00000429836 MYOCOSA0A1B0GUC4 107 aa11.63□□□□□ -0.55
SEMA4D-209ENST00000429836 GRIN3BO60391 1043 aa11.63□□□□□ -0.55
SEMA4D-209ENST00000429836 SLITRK3O94933 977 aa11.63□□□□□ -0.55
SEMA4D-209ENST00000429836 CDK4P11802 303 aa11.63□□□□□ -0.55
SEMA4D-209ENST00000429836 ATF7P17544 494 aaPredicted RBP11.63□□□□□ -0.55
SEMA4D-209ENST00000429836 SLC25A3Q00325 362 aa11.63□□□□□ -0.55
SEMA4D-209ENST00000429836 PLOD1Q02809 727 aaPredicted RBP11.63□□□□□ -0.55
SEMA4D-209ENST00000429836 BTKQ06187 659 aa11.63□□□□□ -0.55
SEMA4D-209ENST00000429836 UBAP2LQ14157 1087 aaKnown RBP11.63□□□□□ -0.55
SEMA4D-209ENST00000429836 GRM2Q14416 872 aa11.63□□□□□ -0.55
SEMA4D-209ENST00000429836 MSS51Q4VC12 460 aa11.63□□□□□ -0.55
SEMA4D-209ENST00000429836 TMCO4Q5TGY1 634 aa11.63□□□□□ -0.55
SEMA4D-209ENST00000429836 SYDE2Q5VT97 1194 aa11.63□□□□□ -0.55
SEMA4D-209ENST00000429836 PAOXQ6QHF9 649 aa11.63□□□□□ -0.55
SEMA4D-209ENST00000429836 MAP7D3Q8IWC1 876 aa11.63□□□□□ -0.55
SEMA4D-209ENST00000429836 EFCAB3Q8N7B9 438 aa11.63□□□□□ -0.55
SEMA4D-209ENST00000429836 WDR66Q8TBY9 1149 aa11.63□□□□□ -0.55
SEMA4D-209ENST00000429836 MZB1Q8WU39 189 aa11.63□□□□□ -0.55
SEMA4D-209ENST00000429836 CCDC124Q96CT7 223 aaKnown RBP11.63□□□□□ -0.55
SEMA4D-209ENST00000429836 TDRKHQ9Y2W6 561 aaKnown RBP11.63□□□□□ -0.55
SEMA4D-209ENST00000429836 C15orf38-AP3S2A0A0A6YYH1 394 aa11.62□□□□□ -0.55
SEMA4D-209ENST00000429836 DENND3A2RUS2 1198 aa11.62□□□□□ -0.55
SEMA4D-209ENST00000429836 PRR5-ARHGAP8B1AHC4 643 aa11.62□□□□□ -0.55
SEMA4D-209ENST00000429836 SLC26A4O43511 780 aa11.62□□□□□ -0.55
SEMA4D-209ENST00000429836 PDE5AO76074 875 aa11.62□□□□□ -0.55
SEMA4D-209ENST00000429836 ATP6V1B1P15313 513 aa11.62□□□□□ -0.55
SEMA4D-209ENST00000429836 RGS2P41220 211 aa11.62□□□□□ -0.55
SEMA4D-209ENST00000429836 MXI1P50539 228 aa11.62□□□□□ -0.55
SEMA4D-209ENST00000429836 CHN2P52757 468 aa11.62□□□□□ -0.55
SEMA4D-209ENST00000429836 EPHB1P54762 984 aa11.62□□□□□ -0.55
SEMA4D-209ENST00000429836 ARHGAP8P85298 464 aa11.62□□□□□ -0.55
SEMA4D-209ENST00000429836 ALCAMQ13740 583 aa11.62□□□□□ -0.55
SEMA4D-209ENST00000429836 TRIP10Q15642 601 aa11.62□□□□□ -0.55
SEMA4D-209ENST00000429836 USH1GQ495M9 461 aa11.62□□□□□ -0.55
SEMA4D-209ENST00000429836 B3GNT6Q6ZMB0 384 aa11.62□□□□□ -0.55
SEMA4D-209ENST00000429836 CENPUQ71F23 418 aa11.62□□□□□ -0.55
SEMA4D-209ENST00000429836 ARPINQ7Z6K5 226 aa11.62□□□□□ -0.55
SEMA4D-209ENST00000429836 ARID3BQ8IVW6 561 aaPredicted RBP11.62□□□□□ -0.55
SEMA4D-209ENST00000429836 METTL25Q8N6Q8 603 aa11.62□□□□□ -0.55
SEMA4D-209ENST00000429836 SERAC1Q96JX3 654 aa11.62□□□□□ -0.55
SEMA4D-209ENST00000429836 PRICKLE1Q96MT3 831 aaPredicted RBP11.62□□□□□ -0.55
SEMA4D-209ENST00000429836 KLHL4Q9C0H6 718 aa11.62□□□□□ -0.55
SEMA4D-209ENST00000429836 TM9SF1O15321 606 aa11.62□□□□□ -0.55
SEMA4D-209ENST00000429836 LIASO43766 372 aa11.62□□□□□ -0.55
SEMA4D-209ENST00000429836 KRT5P13647 590 aa11.62□□□□□ -0.55
SEMA4D-209ENST00000429836 PCSK6P29122 969 aa11.62□□□□□ -0.55
SEMA4D-209ENST00000429836 HOXA13P31271 388 aaPredicted RBP11.62□□□□□ -0.55
SEMA4D-209ENST00000429836 TBL3Q12788 808 aaKnown RBP11.62□□□□□ -0.55
SEMA4D-209ENST00000429836 CBX3Q13185 183 aa11.62□□□□□ -0.55
SEMA4D-209ENST00000429836 FAM182AQ5T1J6 154 aa11.62□□□□□ -0.55
SEMA4D-209ENST00000429836 UGT2A3Q6UWM9 527 aa11.62□□□□□ -0.55
SEMA4D-209ENST00000429836 C3orf62Q6ZUJ4 267 aa11.62□□□□□ -0.55
SEMA4D-209ENST00000429836 DDX1Q92499 740 aaKnown RBP11.62□□□□□ -0.55
SEMA4D-209ENST00000429836 SHC3Q92529 594 aa11.62□□□□□ -0.55
SEMA4D-209ENST00000429836 ACSF2Q96CM8 615 aaPredicted RBP11.62□□□□□ -0.55
SEMA4D-209ENST00000429836 CATSPER2Q96P56 530 aa11.62□□□□□ -0.55
SEMA4D-209ENST00000429836 GCNAQ96QF7 691 aa11.62□□□□□ -0.55
SEMA4D-209ENST00000429836 FOXP3Q9BZS1 431 aa11.62□□□□□ -0.55
SEMA4D-209ENST00000429836 GRIP2Q9C0E4 1043 aa11.62□□□□□ -0.55
SEMA4D-209ENST00000429836 ARHGEF38Q9NXL2 777 aa11.62□□□□□ -0.55
SEMA4D-209ENST00000429836 TAGLN3Q9UI15 199 aa11.62□□□□□ -0.55
SEMA4D-209ENST00000429836 KAT6AQ92794 2004 aa11.62□□□□□ -0.55
SEMA4D-209ENST00000429836 A0A088AWK7 358 aa11.61□□□□□ -0.55
SEMA4D-209ENST00000429836 MT-ND3P03897 115 aa11.61□□□□□ -0.55
SEMA4D-209ENST00000429836 TFAP2AP05549 437 aa11.61□□□□□ -0.55
SEMA4D-209ENST00000429836 TCF4P15884 667 aa11.61□□□□□ -0.55
SEMA4D-209ENST00000429836 GTF2H1P32780 548 aa11.61□□□□□ -0.55
SEMA4D-209ENST00000429836 CCDC142Q17RM4 750 aa11.61□□□□□ -0.55
SEMA4D-209ENST00000429836 CLEC16AQ2KHT3 1053 aa11.61□□□□□ -0.55
SEMA4D-209ENST00000429836 NADK2Q4G0N4 442 aa11.61□□□□□ -0.55
SEMA4D-209ENST00000429836 TMEM259Q4ZIN3 620 aa11.61□□□□□ -0.55
SEMA4D-209ENST00000429836 SH3D19Q5HYK7 790 aa11.61□□□□□ -0.55
SEMA4D-209ENST00000429836 RALGPS1Q5JS13 557 aa11.61□□□□□ -0.55
SEMA4D-209ENST00000429836 FNBP1LQ5T0N5 605 aa11.61□□□□□ -0.55
SEMA4D-209ENST00000429836 FAM182BQ5T319 152 aa11.61□□□□□ -0.55
SEMA4D-209ENST00000429836 RNASEH2BQ5TBB1 312 aaKnown RBP11.61□□□□□ -0.55
SEMA4D-209ENST00000429836 ANKRD22Q5VYY1 191 aa11.61□□□□□ -0.55
SEMA4D-209ENST00000429836 KLC3Q6P597 504 aa11.61□□□□□ -0.55
SEMA4D-209ENST00000429836 POU5F2Q8N7G0 328 aa11.61□□□□□ -0.55
SEMA4D-209ENST00000429836 PYROXD1Q8WU10 500 aa11.61□□□□□ -0.55
SEMA4D-209ENST00000429836 CCDC127Q96BQ5 260 aa11.61□□□□□ -0.55
SEMA4D-209ENST00000429836 HSPBAP1Q96EW2 488 aa11.61□□□□□ -0.55
SEMA4D-209ENST00000429836 WDR83Q9BRX9 315 aaKnown RBP11.61□□□□□ -0.55
SEMA4D-209ENST00000429836 TMEM121Q9BTD3 319 aa11.61□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms