RNA–Protein interactions for RNA: ENST00000428574.6

NR1I3-209, Transcript of nuclear receptor subfamily 1 group I member 3, humanhuman

TSL 1 (best) BASIC

Gene NR1I3, Length 1,117 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1I3-209ENST00000428574 TMEM199Q8N511 208 aa9.61□□□□□ -0.87
NR1I3-209ENST00000428574 NIPA2Q8N8Q9 360 aa9.61□□□□□ -0.87
NR1I3-209ENST00000428574 ANKRD52Q8NB46 1076 aa9.61□□□□□ -0.87
NR1I3-209ENST00000428574 RNF169Q8NCN4 708 aa9.61□□□□□ -0.87
NR1I3-209ENST00000428574 B3GALNT2Q8NCR0 500 aa9.61□□□□□ -0.87
NR1I3-209ENST00000428574 OR6B3Q8NGW1 331 aa9.61□□□□□ -0.87
NR1I3-209ENST00000428574 IPO4Q8TEX9 1081 aaKnown RBP9.61□□□□□ -0.87
NR1I3-209ENST00000428574 DIS3LQ8TF46 1054 aaKnown RBP9.61□□□□□ -0.87
NR1I3-209ENST00000428574 ARHGEF26Q96DR7 871 aa9.61□□□□□ -0.87
NR1I3-209ENST00000428574 HES6Q96HZ4 224 aa9.61□□□□□ -0.87
NR1I3-209ENST00000428574 PAWRQ96IZ0 340 aaKnown RBP9.61□□□□□ -0.87
NR1I3-209ENST00000428574 PBKQ96KB5 322 aa9.61□□□□□ -0.87
NR1I3-209ENST00000428574 TWNKQ96RR1 684 aa9.61□□□□□ -0.87
NR1I3-209ENST00000428574 HNRNPABQ99729 332 aaKnown RBP9.61□□□□□ -0.87
NR1I3-209ENST00000428574 ZSWIM1Q9BR11 485 aa9.61□□□□□ -0.87
NR1I3-209ENST00000428574 ACBD6Q9BR61 282 aa9.61□□□□□ -0.87
NR1I3-209ENST00000428574 MRPL45Q9BRJ2 306 aaKnown RBP9.61□□□□□ -0.87
NR1I3-209ENST00000428574 TLR10Q9BXR5 811 aa9.61□□□□□ -0.87
NR1I3-209ENST00000428574 UBXN6Q9BZV1 441 aa9.61□□□□□ -0.87
NR1I3-209ENST00000428574 GOLGA2P5Q9HBQ8 144 aa9.61□□□□□ -0.87
NR1I3-209ENST00000428574 PNPLA8Q9NP80 782 aa9.61□□□□□ -0.87
NR1I3-209ENST00000428574 TBC1D13Q9NVG8 400 aa9.61□□□□□ -0.87
NR1I3-209ENST00000428574 CNOT8Q9UFF9 292 aaKnown RBP9.61□□□□□ -0.87
NR1I3-209ENST00000428574 HMGXB4Q9UGU5 601 aa9.61□□□□□ -0.87
NR1I3-209ENST00000428574 PUF60Q9UHX1 559 aaKnown RBP9.61□□□□□ -0.87
NR1I3-209ENST00000428574 PCDHB8Q9UN66 801 aa9.61□□□□□ -0.87
NR1I3-209ENST00000428574 ATP11BQ9Y2G3 1177 aa9.61□□□□□ -0.87
NR1I3-209ENST00000428574 LOC101059915A0A1B0GWI6 518 aaPredicted RBP9.6□□□□□ -0.87
NR1I3-209ENST00000428574 TCRBV5S1A1TA0A578 114 aa9.6□□□□□ -0.87
NR1I3-209ENST00000428574 TMCO5BA8MYB1 307 aa9.6□□□□□ -0.87
NR1I3-209ENST00000428574 M0QYV0 167 aa9.6□□□□□ -0.87
NR1I3-209ENST00000428574 BUB1O43683 1085 aa9.6□□□□□ -0.87
NR1I3-209ENST00000428574 BUB1BO60566 1050 aaPredicted RBP9.6□□□□□ -0.87
NR1I3-209ENST00000428574 MICAL2O94851 1124 aa9.6□□□□□ -0.87
NR1I3-209ENST00000428574 SLU7O95391 586 aaKnown RBP9.6□□□□□ -0.87
NR1I3-209ENST00000428574 RNASELQ05823 741 aaKnown RBP9.6□□□□□ -0.87
NR1I3-209ENST00000428574 SMARCB1Q12824 385 aa9.6□□□□□ -0.87
NR1I3-209ENST00000428574 PDCLQ13371 301 aa9.6□□□□□ -0.87
NR1I3-209ENST00000428574 MAMLD1Q13495 774 aa9.6□□□□□ -0.87
NR1I3-209ENST00000428574 RPS6KA1Q15418 735 aa9.6□□□□□ -0.87
NR1I3-209ENST00000428574 LRRC26Q2I0M4 334 aa9.6□□□□□ -0.87
NR1I3-209ENST00000428574 ZNF394Q53GI3 561 aa9.6□□□□□ -0.87
NR1I3-209ENST00000428574 PPP1R15BQ5SWA1 713 aa9.6□□□□□ -0.87
NR1I3-209ENST00000428574 MFSD5Q6N075 450 aa9.6□□□□□ -0.87
NR1I3-209ENST00000428574 DSTYKQ6XUX3 929 aa9.6□□□□□ -0.87
NR1I3-209ENST00000428574 PEX26Q7Z412 305 aa9.6□□□□□ -0.87
NR1I3-209ENST00000428574 TMEM110Q86TL2 294 aa9.6□□□□□ -0.87
NR1I3-209ENST00000428574 NT5DC3Q86UY8 548 aa9.6□□□□□ -0.87
NR1I3-209ENST00000428574 PIP4P2Q8N4L2 257 aa9.6□□□□□ -0.87
NR1I3-209ENST00000428574 WDTC1Q8N5D0 677 aa9.6□□□□□ -0.87
NR1I3-209ENST00000428574 UBL4BQ8N7F7 174 aa9.6□□□□□ -0.87
NR1I3-209ENST00000428574 SLC35F5Q8WV83 523 aa9.6□□□□□ -0.87
NR1I3-209ENST00000428574 CPA5Q8WXQ8 436 aa9.6□□□□□ -0.87
NR1I3-209ENST00000428574 ELMO3Q96BJ8 720 aa9.6□□□□□ -0.87
NR1I3-209ENST00000428574 C18orf8Q96DM3 657 aa9.6□□□□□ -0.87
NR1I3-209ENST00000428574 MCRS1Q96EZ8 462 aa9.6□□□□□ -0.87
NR1I3-209ENST00000428574 HSFY1Q96LI6 401 aa9.6□□□□□ -0.87
NR1I3-209ENST00000428574 FAM193BQ96PV7 902 aaPredicted RBP9.6□□□□□ -0.87
NR1I3-209ENST00000428574 NUP85Q9BW27 656 aa9.6□□□□□ -0.87
NR1I3-209ENST00000428574 PLVAPQ9BX97 442 aa9.6□□□□□ -0.87
NR1I3-209ENST00000428574 SLC4A5Q9BY07 1137 aa9.6□□□□□ -0.87
NR1I3-209ENST00000428574 CARD9Q9H257 536 aa9.6□□□□□ -0.87
NR1I3-209ENST00000428574 TMEM51Q9NW97 253 aa9.6□□□□□ -0.87
NR1I3-209ENST00000428574 TSPAN16Q9UKR8 245 aa9.6□□□□□ -0.87
NR1I3-209ENST00000428574 AMFRQ9UKV5 643 aa9.6□□□□□ -0.87
NR1I3-209ENST00000428574 TTC7AQ9ULT0 858 aaPredicted RBP9.6□□□□□ -0.87
NR1I3-209ENST00000428574 TFR2Q9UP52 801 aa9.6□□□□□ -0.87
NR1I3-209ENST00000428574 COL4A6Q14031 1691 aa9.6□□□□□ -0.87
NR1I3-209ENST00000428574 SF3B1O75533 1304 aaKnown RBP eCLIP9.59□□□□□ -0.87
NR1I3-209ENST00000428574 LTBP2Q14767 1821 aa9.59□□□□□ -0.87
NR1I3-209ENST00000428574 TMEM191CA6NGB0 347 aa9.59□□□□□ -0.87
NR1I3-209ENST00000428574 CASTOR2A6NHX0 329 aa9.59□□□□□ -0.87
NR1I3-209ENST00000428574 SIGLEC16A6NMB1 481 aa9.59□□□□□ -0.87
NR1I3-209ENST00000428574 EFCAB8A8MWE9 144 aa9.59□□□□□ -0.87
NR1I3-209ENST00000428574 MYO1FO00160 1098 aa9.59□□□□□ -0.87
NR1I3-209ENST00000428574 RIOK3O14730 519 aaKnown RBP9.59□□□□□ -0.87
NR1I3-209ENST00000428574 XPO1O14980 1071 aaKnown RBP9.59□□□□□ -0.87
NR1I3-209ENST00000428574 SART1O43290 800 aaKnown RBP9.59□□□□□ -0.87
NR1I3-209ENST00000428574 CTIFO43310 598 aaKnown RBP9.59□□□□□ -0.87
NR1I3-209ENST00000428574 PROSCO94903 275 aa9.59□□□□□ -0.87
NR1I3-209ENST00000428574 OAZ2O95190 189 aa9.59□□□□□ -0.87
NR1I3-209ENST00000428574 POMCP01189 267 aa9.59□□□□□ -0.87
NR1I3-209ENST00000428574 AMHP03971 560 aa9.59□□□□□ -0.87
NR1I3-209ENST00000428574 ERBB2P04626 1255 aa9.59□□□□□ -0.87
NR1I3-209ENST00000428574 ATP1A1P05023 1023 aaKnown RBP9.59□□□□□ -0.87
NR1I3-209ENST00000428574 TUBBP07437 444 aa9.59□□□□□ -0.87
NR1I3-209ENST00000428574 DESP17661 470 aa9.59□□□□□ -0.87
NR1I3-209ENST00000428574 PTPN1P18031 435 aaKnown RBP9.59□□□□□ -0.87
NR1I3-209ENST00000428574 RRM1P23921 792 aa9.59□□□□□ -0.87
NR1I3-209ENST00000428574 CTNNA2P26232 953 aa9.59□□□□□ -0.87
NR1I3-209ENST00000428574 CYP2C18P33260 490 aa9.59□□□□□ -0.87
NR1I3-209ENST00000428574 PLA2G4AP47712 749 aa9.59□□□□□ -0.87
NR1I3-209ENST00000428574 AFF1P51825 1210 aaKnown RBP9.59□□□□□ -0.87
NR1I3-209ENST00000428574 PIGHQ14442 188 aaPredicted RBP9.59□□□□□ -0.87
NR1I3-209ENST00000428574 PTPN20Q4JDL3 420 aa9.59□□□□□ -0.87
NR1I3-209ENST00000428574 TIGD5Q53EQ6 642 aa9.59□□□□□ -0.87
NR1I3-209ENST00000428574 LRRC38Q5VT99 294 aa9.59□□□□□ -0.87
NR1I3-209ENST00000428574 WSCD1Q658N2 575 aa9.59□□□□□ -0.87
NR1I3-209ENST00000428574 DENND1BQ6P3S1 775 aa9.59□□□□□ -0.87
NR1I3-209ENST00000428574 DNAJC24Q6P3W2 148 aa9.59□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms