RNA–Protein interactions for RNA: ENST00000428153.6

DDR1-235, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 5

Gene DDR1, Length 1,257 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-235ENST00000428153 PDCL2Q8N4E4 241 aa18.73■□□□□ 0.59
DDR1-235ENST00000428153 CXorf38Q8TB03 319 aa18.73■□□□□ 0.59
DDR1-235ENST00000428153 GIPC2Q8TF65 315 aa18.73■□□□□ 0.59
DDR1-235ENST00000428153 TRMT2BQ96GJ1 504 aaKnown RBP18.73■□□□□ 0.59
DDR1-235ENST00000428153 ZFYVE19Q96K21 471 aa18.73■□□□□ 0.59
DDR1-235ENST00000428153 FAM83CQ9BQN1 747 aa18.73■□□□□ 0.59
DDR1-235ENST00000428153 IKZF4Q9H2S9 585 aa18.73■□□□□ 0.59
DDR1-235ENST00000428153 ZSCAN16Q9H4T2 348 aaPredicted RBP18.73■□□□□ 0.59
DDR1-235ENST00000428153 CCDC163A0A0D9SF12 145 aa18.72■□□□□ 0.59
DDR1-235ENST00000428153 MED19A0JLT2 244 aaPredicted RBP18.72■□□□□ 0.59
DDR1-235ENST00000428153 ITGB3P05106 788 aa18.72■□□□□ 0.59
DDR1-235ENST00000428153 STAT6P42226 847 aa18.72■□□□□ 0.59
DDR1-235ENST00000428153 LHX1P48742 406 aa18.72■□□□□ 0.59
DDR1-235ENST00000428153 CFAP221Q4G0U5 840 aa18.72■□□□□ 0.59
DDR1-235ENST00000428153 WDR44Q5JSH3 913 aa18.72■□□□□ 0.59
DDR1-235ENST00000428153 INTS6LQ5JSJ4 861 aaKnown RBP18.72■□□□□ 0.59
DDR1-235ENST00000428153 STXBP4Q6ZWJ1 553 aa18.72■□□□□ 0.59
DDR1-235ENST00000428153 DPH6Q7L8W6 267 aa18.72■□□□□ 0.59
DDR1-235ENST00000428153 SYCP3Q8IZU3 236 aa18.72■□□□□ 0.59
DDR1-235ENST00000428153 TOP6BLQ8N6T0 577 aa18.72■□□□□ 0.59
DDR1-235ENST00000428153 MRPS31Q92665 395 aaKnown RBP18.72■□□□□ 0.59
DDR1-235ENST00000428153 FUBP3Q96I24 572 aaKnown RBP eCLIP18.72■□□□□ 0.59
DDR1-235ENST00000428153 MYRFLQ96LU7 910 aa18.72■□□□□ 0.59
DDR1-235ENST00000428153 CLIC6Q96NY7 704 aa18.72■□□□□ 0.59
DDR1-235ENST00000428153 RTKNQ9BST9 563 aa18.72■□□□□ 0.59
DDR1-235ENST00000428153 RBM12Q9NTZ6 932 aaKnown RBP18.72■□□□□ 0.59
DDR1-235ENST00000428153 TDP1Q9NUW8 608 aa18.72■□□□□ 0.59
DDR1-235ENST00000428153 CDV3Q9UKY7 258 aaKnown RBP18.72■□□□□ 0.59
DDR1-235ENST00000428153 L1RE1Q9UN81 338 aa18.72■□□□□ 0.59
DDR1-235ENST00000428153 AGAP1Q9UPQ3 857 aa18.72■□□□□ 0.59
DDR1-235ENST00000428153 SPTBN2O15020 2390 aa18.72■□□□□ 0.59
DDR1-235ENST00000428153 GABRDO14764 452 aa18.71■□□□□ 0.59
DDR1-235ENST00000428153 IDEP14735 1019 aa18.71■□□□□ 0.59
DDR1-235ENST00000428153 PCSK1P29120 753 aa18.71■□□□□ 0.59
DDR1-235ENST00000428153 CASP5P51878 434 aa18.71■□□□□ 0.59
DDR1-235ENST00000428153 WNT7BP56706 349 aa18.71■□□□□ 0.59
DDR1-235ENST00000428153 RBP5P82980 135 aa18.71■□□□□ 0.59
DDR1-235ENST00000428153 BFSP1Q12934 665 aa18.71■□□□□ 0.59
DDR1-235ENST00000428153 PON2Q15165 354 aa18.71■□□□□ 0.59
DDR1-235ENST00000428153 SURF1Q15526 300 aa18.71■□□□□ 0.59
DDR1-235ENST00000428153 MON1AQ86VX9 555 aa18.71■□□□□ 0.59
DDR1-235ENST00000428153 CEP295NLQ96MC4 621 aa18.71■□□□□ 0.59
DDR1-235ENST00000428153 PKMYT1Q99640 499 aa18.71■□□□□ 0.59
DDR1-235ENST00000428153 LRRC27Q9C0I9 530 aa18.71■□□□□ 0.59
DDR1-235ENST00000428153 PANK4Q9NVE7 773 aa18.71■□□□□ 0.59
DDR1-235ENST00000428153 TMLHEQ9NVH6 421 aa18.71■□□□□ 0.59
DDR1-235ENST00000428153 DDX43Q9NXZ2 648 aaKnown RBP18.71■□□□□ 0.59
DDR1-235ENST00000428153 USP18Q9UMW8 372 aa18.71■□□□□ 0.59
DDR1-235ENST00000428153 TRDMT1O14717 391 aaKnown RBP18.7■□□□□ 0.58
DDR1-235ENST00000428153 PRPF40AO75400 957 aaKnown RBP18.7■□□□□ 0.58
DDR1-235ENST00000428153 NOL4O94818 638 aa18.7■□□□□ 0.58
DDR1-235ENST00000428153 ATXN1P54253 815 aaKnown RBP18.7■□□□□ 0.58
DDR1-235ENST00000428153 TNK2Q07912 1038 aa18.7■□□□□ 0.58
DDR1-235ENST00000428153 RUNX3Q13761 415 aa18.7■□□□□ 0.58
DDR1-235ENST00000428153 SIM2Q14190 667 aaPredicted RBP18.7■□□□□ 0.58
DDR1-235ENST00000428153 TMEM196Q5HYL7 178 aa18.7■□□□□ 0.58
DDR1-235ENST00000428153 Q6ZS52 159 aa18.7■□□□□ 0.58
DDR1-235ENST00000428153 WDR5BQ86VZ2 330 aa18.7■□□□□ 0.58
DDR1-235ENST00000428153 GPIHBP1Q8IV16 184 aa18.7■□□□□ 0.58
DDR1-235ENST00000428153 CCDC65Q8IXS2 484 aa18.7■□□□□ 0.58
DDR1-235ENST00000428153 GPD1LQ8N335 351 aa18.7■□□□□ 0.58
DDR1-235ENST00000428153 CSGALNACT2Q8N6G5 542 aa18.7■□□□□ 0.58
DDR1-235ENST00000428153 MAB21L3Q8N8X9 362 aa18.7■□□□□ 0.58
DDR1-235ENST00000428153 USP13Q92995 863 aaPredicted RBP18.7■□□□□ 0.58
DDR1-235ENST00000428153 EXOC4Q96A65 974 aa18.7■□□□□ 0.58
DDR1-235ENST00000428153 SAAL1Q96ER3 474 aa18.7■□□□□ 0.58
DDR1-235ENST00000428153 USP28Q96RU2 1077 aa18.7■□□□□ 0.58
DDR1-235ENST00000428153 CBWD1Q9BRT8 395 aa18.7■□□□□ 0.58
DDR1-235ENST00000428153 PI4K2AQ9BTU6 479 aa18.7■□□□□ 0.58
DDR1-235ENST00000428153 TNMDQ9H2S6 317 aa18.7■□□□□ 0.58
DDR1-235ENST00000428153 PARD6AQ9NPB6 346 aa18.7■□□□□ 0.58
DDR1-235ENST00000428153 GKN1Q9NS71 199 aa18.7■□□□□ 0.58
DDR1-235ENST00000428153 TBC1D7Q9P0N9 293 aa18.7■□□□□ 0.58
DDR1-235ENST00000428153 TPRP12270 2363 aaKnown RBP18.7■□□□□ 0.58
DDR1-235ENST00000428153 CHURC1-FNTBB4DL54 471 aa18.69■□□□□ 0.58
DDR1-235ENST00000428153 HRO43593 1189 aa18.69■□□□□ 0.58
DDR1-235ENST00000428153 ATG13O75143 517 aa18.69■□□□□ 0.58
DDR1-235ENST00000428153 TMEM191BP0C7N4 346 aa18.69■□□□□ 0.58
DDR1-235ENST00000428153 MAGEA11P43364 429 aa18.69■□□□□ 0.58
DDR1-235ENST00000428153 NASPP49321 788 aaPredicted RBP18.69■□□□□ 0.58
DDR1-235ENST00000428153 FNTBP49356 437 aa18.69■□□□□ 0.58
DDR1-235ENST00000428153 GRSF1Q12849 480 aaKnown RBP eCLIP18.69■□□□□ 0.58
DDR1-235ENST00000428153 MYO1EQ12965 1108 aa18.69■□□□□ 0.58
DDR1-235ENST00000428153 PDGFRLQ15198 375 aa18.69■□□□□ 0.58
DDR1-235ENST00000428153 PRR23BQ6ZRT6 265 aa18.69■□□□□ 0.58
DDR1-235ENST00000428153 LIMS2Q7Z4I7 341 aa18.69■□□□□ 0.58
DDR1-235ENST00000428153 ANKRD36BP1Q96IX9 119 aa18.69■□□□□ 0.58
DDR1-235ENST00000428153 CUEDC2Q9H467 287 aa18.69■□□□□ 0.58
DDR1-235ENST00000428153 KIAA1586Q9HCI6 787 aa18.69■□□□□ 0.58
DDR1-235ENST00000428153 HPS4Q9NQG7 708 aa18.69■□□□□ 0.58
DDR1-235ENST00000428153 R3HCC1Q9Y3T6 440 aaKnown RBP18.69■□□□□ 0.58
DDR1-235ENST00000428153 SNX9Q9Y5X1 595 aa18.69■□□□□ 0.58
DDR1-235ENST00000428153 OBSL1O75147 1896 aa18.69■□□□□ 0.58
DDR1-235ENST00000428153 ZNF638Q14966 1978 aaKnown RBP18.68■□□□□ 0.58
DDR1-235ENST00000428153 FAM160A1Q05DH4 1040 aa18.68■□□□□ 0.58
DDR1-235ENST00000428153 CSRP2Q16527 193 aa18.68■□□□□ 0.58
DDR1-235ENST00000428153 FBXO43Q4G163 708 aa18.68■□□□□ 0.58
DDR1-235ENST00000428153 CC2D1AQ6P1N0 951 aaPredicted RBP18.68■□□□□ 0.58
DDR1-235ENST00000428153 FAM173BQ6P4H8 233 aa18.68■□□□□ 0.58
DDR1-235ENST00000428153 FAM171BQ6P995 826 aa18.68■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms