RNA–Protein interactions for RNA: ENST00000427566.2

CLK3P2-201, Transcript of CDC like kinase 3 pseudogene 2, humanhuman

BASIC

Gene CLK3P2, Length 1,453 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3P2-201ENST00000427566 SDCBP2Q9H190 292 aa16.79■□□□□ 0.28
CLK3P2-201ENST00000427566 SMYD3Q9H7B4 428 aa16.79■□□□□ 0.28
CLK3P2-201ENST00000427566 VRTNQ9H8Y1 702 aa16.79■□□□□ 0.28
CLK3P2-201ENST00000427566 ANO10Q9NW15 660 aa16.79■□□□□ 0.28
CLK3P2-201ENST00000427566 MTMR11A4FU01 709 aa16.78■□□□□ 0.28
CLK3P2-201ENST00000427566 GABRDO14764 452 aa16.78■□□□□ 0.28
CLK3P2-201ENST00000427566 GNA14O95837 355 aa16.78■□□□□ 0.28
CLK3P2-201ENST00000427566 PTPN2P17706 415 aa16.78■□□□□ 0.28
CLK3P2-201ENST00000427566 FMO5P49326 533 aa16.78■□□□□ 0.28
CLK3P2-201ENST00000427566 TNNC1P63316 161 aa16.78■□□□□ 0.28
CLK3P2-201ENST00000427566 KCNH2Q12809 1159 aa16.78■□□□□ 0.28
CLK3P2-201ENST00000427566 SGSM1Q2NKQ1 1148 aa16.78■□□□□ 0.28
CLK3P2-201ENST00000427566 IQCEQ6IPM2 695 aa16.78■□□□□ 0.28
CLK3P2-201ENST00000427566 RTL10Q7L3V2 364 aa16.78■□□□□ 0.28
CLK3P2-201ENST00000427566 ATAD1Q8NBU5 361 aa16.78■□□□□ 0.28
CLK3P2-201ENST00000427566 RNF214Q8ND24 703 aa16.78■□□□□ 0.28
CLK3P2-201ENST00000427566 FBXL13Q8NEE6 735 aa16.78■□□□□ 0.28
CLK3P2-201ENST00000427566 ITFG1Q8TB96 612 aa16.78■□□□□ 0.28
CLK3P2-201ENST00000427566 ZNF512Q96ME7 567 aaPredicted RBP16.78■□□□□ 0.28
CLK3P2-201ENST00000427566 DDX43Q9NXZ2 648 aaKnown RBP16.78■□□□□ 0.28
CLK3P2-201ENST00000427566 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP16.78■□□□□ 0.28
CLK3P2-201ENST00000427566 SORCS3Q9UPU3 1222 aa16.78■□□□□ 0.28
CLK3P2-201ENST00000427566 MRPS23Q9Y3D9 190 aaKnown RBP16.78■□□□□ 0.28
CLK3P2-201ENST00000427566 YIPF1Q9Y548 306 aa16.78■□□□□ 0.28
CLK3P2-201ENST00000427566 PAPLNO95428 1278 aa16.77■□□□□ 0.28
CLK3P2-201ENST00000427566 FGFR1OPO95684 399 aaKnown RBP16.77■□□□□ 0.28
CLK3P2-201ENST00000427566 CAVIN2O95810 425 aa16.77■□□□□ 0.28
CLK3P2-201ENST00000427566 RHOP08100 348 aa16.77■□□□□ 0.28
CLK3P2-201ENST00000427566 ALDH1A3P47895 512 aa16.77■□□□□ 0.28
CLK3P2-201ENST00000427566 NOP14P78316 857 aaKnown RBP16.77■□□□□ 0.28
CLK3P2-201ENST00000427566 MYL7Q01449 175 aa16.77■□□□□ 0.28
CLK3P2-201ENST00000427566 MTMR3Q13615 1198 aa16.77■□□□□ 0.28
CLK3P2-201ENST00000427566 ANO6Q4KMQ2 910 aa16.77■□□□□ 0.28
CLK3P2-201ENST00000427566 ZNF667Q5HYK9 610 aa16.77■□□□□ 0.28
CLK3P2-201ENST00000427566 CT47A1Q5JQC4 288 aaPredicted RBP16.77■□□□□ 0.28
CLK3P2-201ENST00000427566 DPH6Q7L8W6 267 aa16.77■□□□□ 0.28
CLK3P2-201ENST00000427566 TMEM86AQ8N2M4 240 aa16.77■□□□□ 0.28
CLK3P2-201ENST00000427566 ENOX1Q8TC92 643 aaKnown RBP16.77■□□□□ 0.28
CLK3P2-201ENST00000427566 SEPT5Q99719 369 aaPredicted RBP16.77■□□□□ 0.28
CLK3P2-201ENST00000427566 LPIN3Q9BQK8 851 aa16.77■□□□□ 0.28
CLK3P2-201ENST00000427566 LRFN3Q9BTN0 628 aa16.77■□□□□ 0.28
CLK3P2-201ENST00000427566 ZCWPW1Q9H0M4 648 aa16.77■□□□□ 0.28
CLK3P2-201ENST00000427566 CRISPLD1Q9H336 500 aa16.77■□□□□ 0.28
CLK3P2-201ENST00000427566 SMOC2Q9H3U7 446 aa16.77■□□□□ 0.28
CLK3P2-201ENST00000427566 THAP9Q9H5L6 903 aa16.77■□□□□ 0.28
CLK3P2-201ENST00000427566 C11orf16Q9NQ32 467 aa16.77■□□□□ 0.28
CLK3P2-201ENST00000427566 TMLHEQ9NVH6 421 aa16.77■□□□□ 0.28
CLK3P2-201ENST00000427566 RAB20Q9NX57 234 aa16.77■□□□□ 0.28
CLK3P2-201ENST00000427566 COQ4Q9Y3A0 265 aa16.77■□□□□ 0.28
CLK3P2-201ENST00000427566 NFE2L3Q9Y4A8 694 aa16.77■□□□□ 0.28
CLK3P2-201ENST00000427566 STX10O60499 249 aa16.76■□□□□ 0.27
CLK3P2-201ENST00000427566 GPR37L1O60883 481 aa16.76■□□□□ 0.27
CLK3P2-201ENST00000427566 ATP2C2O75185 946 aa16.76■□□□□ 0.27
CLK3P2-201ENST00000427566 SOAT2O75908 522 aa16.76■□□□□ 0.27
CLK3P2-201ENST00000427566 PDGFRBP09619 1106 aa16.76■□□□□ 0.27
CLK3P2-201ENST00000427566 MYL4P12829 197 aa16.76■□□□□ 0.27
CLK3P2-201ENST00000427566 LAMP2P13473 410 aa16.76■□□□□ 0.27
CLK3P2-201ENST00000427566 TSPY1Q01534 308 aa16.76■□□□□ 0.27
CLK3P2-201ENST00000427566 MGAT5BQ3V5L5 792 aa16.76■□□□□ 0.27
CLK3P2-201ENST00000427566 PDZD4Q76G19 769 aaPredicted RBP16.76■□□□□ 0.27
CLK3P2-201ENST00000427566 DCP1BQ8IZD4 617 aaKnown RBP16.76■□□□□ 0.27
CLK3P2-201ENST00000427566 HS6ST3Q8IZP7 471 aa16.76■□□□□ 0.27
CLK3P2-201ENST00000427566 TTC9BQ8N6N2 239 aa16.76■□□□□ 0.27
CLK3P2-201ENST00000427566 FAM200AQ8TCP9 573 aa16.76■□□□□ 0.27
CLK3P2-201ENST00000427566 RSAD2Q8WXG1 361 aa16.76■□□□□ 0.27
CLK3P2-201ENST00000427566 TATDN2Q93075 761 aa16.76■□□□□ 0.27
CLK3P2-201ENST00000427566 TRIM44Q96DX7 344 aaPredicted RBP16.76■□□□□ 0.27
CLK3P2-201ENST00000427566 KCNK12Q9HB15 430 aa16.76■□□□□ 0.27
CLK3P2-201ENST00000427566 ABI2Q9NYB9 513 aaPredicted RBP16.76■□□□□ 0.27
CLK3P2-201ENST00000427566 MAFFQ9ULX9 164 aa16.76■□□□□ 0.27
CLK3P2-201ENST00000427566 UTP18Q9Y5J1 556 aaKnown RBP eCLIP16.76■□□□□ 0.27
CLK3P2-201ENST00000427566 POU2F2P09086 479 aa16.75■□□□□ 0.27
CLK3P2-201ENST00000427566 WARSP23381 471 aaKnown RBP16.75■□□□□ 0.27
CLK3P2-201ENST00000427566 MYH10P35580 1976 aa16.75■□□□□ 0.27
CLK3P2-201ENST00000427566 ASPAP45381 313 aa16.75■□□□□ 0.27
CLK3P2-201ENST00000427566 EPHB3P54753 998 aa16.75■□□□□ 0.27
CLK3P2-201ENST00000427566 PSMC1P62191 440 aaKnown RBP16.75■□□□□ 0.27
CLK3P2-201ENST00000427566 PLD1Q13393 1074 aa16.75■□□□□ 0.27
CLK3P2-201ENST00000427566 ZNF638Q14966 1978 aaKnown RBP16.75■□□□□ 0.27
CLK3P2-201ENST00000427566 CYP4A22Q5TCH4 519 aa16.75■□□□□ 0.27
CLK3P2-201ENST00000427566 TRIM67Q6ZTA4 783 aa16.75■□□□□ 0.27
CLK3P2-201ENST00000427566 FGF13Q92913 245 aa16.75■□□□□ 0.27
CLK3P2-201ENST00000427566 MCRS1Q96EZ8 462 aa16.75■□□□□ 0.27
CLK3P2-201ENST00000427566 DPEP3Q9H4B8 488 aa16.75■□□□□ 0.27
CLK3P2-201ENST00000427566 FANCLQ9NW38 375 aa16.75■□□□□ 0.27
CLK3P2-201ENST00000427566 CEP72Q9P209 647 aa16.75■□□□□ 0.27
CLK3P2-201ENST00000427566 GTF3C4Q9UKN8 822 aa16.75■□□□□ 0.27
CLK3P2-201ENST00000427566 MUC3AQ02505 3323 aa16.75■□□□□ 0.27
CLK3P2-201ENST00000427566 TMEM221A6NGB7 291 aa16.74■□□□□ 0.27
CLK3P2-201ENST00000427566 M0R296 226 aa16.74■□□□□ 0.27
CLK3P2-201ENST00000427566 TACC1O75410 805 aa16.74■□□□□ 0.27
CLK3P2-201ENST00000427566 GNL1P36915 607 aaPredicted RBP16.74■□□□□ 0.27
CLK3P2-201ENST00000427566 MTIF2P46199 727 aaKnown RBP16.74■□□□□ 0.27
CLK3P2-201ENST00000427566 LHX1P48742 406 aa16.74■□□□□ 0.27
CLK3P2-201ENST00000427566 SIGLEC14Q08ET2 396 aa16.74■□□□□ 0.27
CLK3P2-201ENST00000427566 LRMPQ12912 555 aa16.74■□□□□ 0.27
CLK3P2-201ENST00000427566 NCAPHQ15003 741 aa16.74■□□□□ 0.27
CLK3P2-201ENST00000427566 SLC5A9Q2M3M2 681 aa16.74■□□□□ 0.27
CLK3P2-201ENST00000427566 OR6B3Q8NGW1 331 aa16.74■□□□□ 0.27
CLK3P2-201ENST00000427566 LMO3Q8TAP4 145 aa16.74■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 53.9 ms