RNA–Protein interactions for RNA: ENST00000427332.6

HDAC7-209, Transcript of histone deacetylase 7, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene HDAC7, Length 3,016 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-209ENST00000427332 RAD51CO43502 376 aa14.99□□□□□ -0.01
HDAC7-209ENST00000427332 THP07101 528 aa14.99□□□□□ -0.01
HDAC7-209ENST00000427332 KCNJ1P48048 391 aa14.99□□□□□ -0.01
HDAC7-209ENST00000427332 CCL23P55773 120 aa14.99□□□□□ -0.01
HDAC7-209ENST00000427332 SH3PXD2AQ5TCZ1 1133 aa14.99□□□□□ -0.01
HDAC7-209ENST00000427332 OR6B2Q6IFH4 312 aa14.99□□□□□ -0.01
HDAC7-209ENST00000427332 APPL2Q8NEU8 664 aa14.99□□□□□ -0.01
HDAC7-209ENST00000427332 PXYLP1Q8TE99 480 aa14.99□□□□□ -0.01
HDAC7-209ENST00000427332 SCLYQ96I15 445 aa14.99□□□□□ -0.01
HDAC7-209ENST00000427332 SNX25Q9H3E2 840 aa14.99□□□□□ -0.01
HDAC7-209ENST00000427332 ZWILCHQ9H900 591 aa14.99□□□□□ -0.01
HDAC7-209ENST00000427332 EPB41L5Q9HCM4 733 aa14.99□□□□□ -0.01
HDAC7-209ENST00000427332 CEP290O15078 2479 aa14.99□□□□□ -0.01
HDAC7-209ENST00000427332 KBTBD13C9JR72 458 aa14.98□□□□□ -0.01
HDAC7-209ENST00000427332 CYB561D2O14569 222 aa14.98□□□□□ -0.01
HDAC7-209ENST00000427332 HUS1O60921 280 aa14.98□□□□□ -0.01
HDAC7-209ENST00000427332 HEXIM1O94992 359 aaKnown RBP14.98□□□□□ -0.01
HDAC7-209ENST00000427332 BRCC3P46736 316 aa14.98□□□□□ -0.01
HDAC7-209ENST00000427332 TAF6P49848 677 aa14.98□□□□□ -0.01
HDAC7-209ENST00000427332 BCAR1P56945 870 aa14.98□□□□□ -0.01
HDAC7-209ENST00000427332 MGAT3Q09327 533 aa14.98□□□□□ -0.01
HDAC7-209ENST00000427332 FAM102AQ5T9C2 384 aaPredicted RBP14.98□□□□□ -0.01
HDAC7-209ENST00000427332 CC2D1AQ6P1N0 951 aaPredicted RBP14.98□□□□□ -0.01
HDAC7-209ENST00000427332 CTU1Q7Z7A3 348 aaKnown RBP14.98□□□□□ -0.01
HDAC7-209ENST00000427332 CD302Q8IX05 232 aa14.98□□□□□ -0.01
HDAC7-209ENST00000427332 SLAIN1Q8ND83 568 aa14.98□□□□□ -0.01
HDAC7-209ENST00000427332 ATG4AQ8WYN0 398 aa14.98□□□□□ -0.01
HDAC7-209ENST00000427332 C18orf8Q96DM3 657 aa14.98□□□□□ -0.01
HDAC7-209ENST00000427332 ARFGAP3Q9NP61 516 aa14.98□□□□□ -0.01
HDAC7-209ENST00000427332 WDR3Q9UNX4 943 aaKnown RBP eCLIP14.98□□□□□ -0.01
HDAC7-209ENST00000427332 TET1Q8NFU7 2136 aa14.98□□□□□ -0.01
HDAC7-209ENST00000427332 SART1O43290 800 aaKnown RBP14.98□□□□□ -0.01
HDAC7-209ENST00000427332 ITGB1P05556 798 aa14.98□□□□□ -0.01
HDAC7-209ENST00000427332 PDCLQ13371 301 aa14.98□□□□□ -0.01
HDAC7-209ENST00000427332 PMF1Q6P1K2 205 aa14.98□□□□□ -0.01
HDAC7-209ENST00000427332 TRIM72Q6ZMU5 477 aa14.98□□□□□ -0.01
HDAC7-209ENST00000427332 TTC30AQ86WT1 665 aa14.98□□□□□ -0.01
HDAC7-209ENST00000427332 PHF13Q86YI8 300 aaPredicted RBP14.98□□□□□ -0.01
HDAC7-209ENST00000427332 ADGRF2Q8IZF7 708 aa14.98□□□□□ -0.01
HDAC7-209ENST00000427332 SLC2A14Q8TDB8 520 aa14.98□□□□□ -0.01
HDAC7-209ENST00000427332 CLEC4CQ8WTT0 213 aa14.98□□□□□ -0.01
HDAC7-209ENST00000427332 KBTBD7Q8WVZ9 684 aa14.98□□□□□ -0.01
HDAC7-209ENST00000427332 HAUS1Q96CS2 278 aa14.98□□□□□ -0.01
HDAC7-209ENST00000427332 PARVAQ9NVD7 372 aa14.98□□□□□ -0.01
HDAC7-209ENST00000427332 ATF7P17544 494 aaPredicted RBP14.98□□□□□ -0.01
HDAC7-209ENST00000427332 ATP11AP98196 1134 aa14.98□□□□□ -0.01
HDAC7-209ENST00000427332 ZDHHC14Q8IZN3 488 aa14.98□□□□□ -0.01
HDAC7-209ENST00000427332 FEZF2Q8TBJ5 459 aa14.98□□□□□ -0.01
HDAC7-209ENST00000427332 C1orf54Q8WWF1 131 aa14.98□□□□□ -0.01
HDAC7-209ENST00000427332 PBKQ96KB5 322 aa14.98□□□□□ -0.01
HDAC7-209ENST00000427332 HERPUD2Q9BSE4 406 aa14.98□□□□□ -0.01
HDAC7-209ENST00000427332 DPH5Q9H2P9 285 aa14.98□□□□□ -0.01
HDAC7-209ENST00000427332 HCSTQ9UBK5 93 aa14.98□□□□□ -0.01
HDAC7-209ENST00000427332 PIRO00625 290 aa14.97□□□□□ -0.01
HDAC7-209ENST00000427332 TTI1O43156 1089 aa14.97□□□□□ -0.01
HDAC7-209ENST00000427332 MED7O43513 233 aa14.97□□□□□ -0.01
HDAC7-209ENST00000427332 SASH3O75995 380 aa14.97□□□□□ -0.01
HDAC7-209ENST00000427332 CD4P01730 458 aa14.97□□□□□ -0.01
HDAC7-209ENST00000427332 KRT3P12035 628 aa14.97□□□□□ -0.01
HDAC7-209ENST00000427332 KRT10P13645 584 aa14.97□□□□□ -0.01
HDAC7-209ENST00000427332 LCP1P13796 627 aa14.97□□□□□ -0.01
HDAC7-209ENST00000427332 PBX3P40426 434 aa14.97□□□□□ -0.01
HDAC7-209ENST00000427332 GPD2P43304 727 aa14.97□□□□□ -0.01
HDAC7-209ENST00000427332 FAM193AP78312 1265 aa14.97□□□□□ -0.01
HDAC7-209ENST00000427332 ZNF252P-AS1Q0IIN9 211 aa14.97□□□□□ -0.01
HDAC7-209ENST00000427332 SMC1AQ14683 1233 aaKnown RBP14.97□□□□□ -0.01
HDAC7-209ENST00000427332 C11orf63Q6NUN7 778 aa14.97□□□□□ -0.01
HDAC7-209ENST00000427332 OSTM1Q86WC4 334 aa14.97□□□□□ -0.01
HDAC7-209ENST00000427332 TRIM51Q9BSJ1 452 aa14.97□□□□□ -0.01
HDAC7-209ENST00000427332 RHOBTB2Q9BYZ6 727 aa14.97□□□□□ -0.01
HDAC7-209ENST00000427332 RSAD1Q9HA92 442 aa14.97□□□□□ -0.01
HDAC7-209ENST00000427332 OGFRQ9NZT2 677 aa14.97□□□□□ -0.01
HDAC7-209ENST00000427332 PRG3Q9Y2Y8 225 aaPredicted RBP14.97□□□□□ -0.01
HDAC7-209ENST00000427332 CST5P28325 142 aaPredicted RBP14.97□□□□□ -0.01
HDAC7-209ENST00000427332 C1QBPQ07021 282 aaKnown RBP14.97□□□□□ -0.01
HDAC7-209ENST00000427332 CCDC70Q6NSX1 233 aa14.97□□□□□ -0.01
HDAC7-209ENST00000427332 DSTYKQ6XUX3 929 aa14.97□□□□□ -0.01
HDAC7-209ENST00000427332 DEFB128Q7Z7B8 93 aa14.97□□□□□ -0.01
HDAC7-209ENST00000427332 REM2Q8IYK8 340 aaPredicted RBP14.97□□□□□ -0.01
HDAC7-209ENST00000427332 CYP3A43Q9HB55 503 aa14.97□□□□□ -0.01
HDAC7-209ENST00000427332 MRPL47Q9HD33 250 aaKnown RBP14.97□□□□□ -0.01
HDAC7-209ENST00000427332 SYNJ2BP-COX16A0A087WUM0 186 aa14.96□□□□□ -0.01
HDAC7-209ENST00000427332 PSMA2P25787 234 aa14.96□□□□□ -0.01
HDAC7-209ENST00000427332 CARSP49589 748 aaKnown RBP14.96□□□□□ -0.01
HDAC7-209ENST00000427332 GATMP50440 423 aa14.96□□□□□ -0.01
HDAC7-209ENST00000427332 PEX5P50542 639 aa14.96□□□□□ -0.01
HDAC7-209ENST00000427332 HLTFQ14527 1009 aaKnown RBP eCLIP14.96□□□□□ -0.01
HDAC7-209ENST00000427332 PLEKHA7Q6IQ23 1121 aa14.96□□□□□ -0.01
HDAC7-209ENST00000427332 ANKS1BQ7Z6G8 1248 aa14.96□□□□□ -0.01
HDAC7-209ENST00000427332 RTN4RL1Q86UN2 441 aaPredicted RBP14.96□□□□□ -0.01
HDAC7-209ENST00000427332 PPP1R10Q96QC0 940 aaKnown RBP14.96□□□□□ -0.01
HDAC7-209ENST00000427332 COX16Q9P0S2 106 aa14.96□□□□□ -0.01
HDAC7-209ENST00000427332 NFU1Q9UMS0 254 aa14.96□□□□□ -0.01
HDAC7-209ENST00000427332 PODXLO00592 558 aa14.96□□□□□ -0.01
HDAC7-209ENST00000427332 VDRP11473 427 aa14.96□□□□□ -0.01
HDAC7-209ENST00000427332 RWDD2BP57060 319 aa14.96□□□□□ -0.01
HDAC7-209ENST00000427332 PTK7Q13308 1070 aa14.96□□□□□ -0.01
HDAC7-209ENST00000427332 PCBP1Q15365 356 aaKnown RBP eCLIP14.96□□□□□ -0.013e-7■■■■□ 25.7
HDAC7-209ENST00000427332 C15orf59Q2T9L4 293 aaPredicted RBP14.96□□□□□ -0.01
HDAC7-209ENST00000427332 SEL1L2Q5TEA6 688 aa14.96□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms