RNA–Protein interactions for RNA: ENST00000427191.6

PTPN13-203, Transcript of protein tyrosine phosphatase, non-receptor type 13, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPN13, Length 8,487 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN13-203ENST00000427191 ABCB1P08183 1280 aaPredicted RBP15□□□□□ -0.01
PTPN13-203ENST00000427191 LCP1P13796 627 aa15□□□□□ -0.01
PTPN13-203ENST00000427191 CORO7P57737 925 aa15□□□□□ -0.01
PTPN13-203ENST00000427191 HAUS6Q7Z4H7 955 aa15□□□□□ -0.01
PTPN13-203ENST00000427191 ERP44Q9BS26 406 aa15□□□□□ -0.01
PTPN13-203ENST00000427191 HMG20AQ9NP66 347 aa15□□□□□ -0.01
PTPN13-203ENST00000427191 PCDHB2Q9Y5E7 798 aa15□□□□□ -0.01
PTPN13-203ENST00000427191 SYNCRIPO60506 623 aaKnown RBP15□□□□□ -0.01
PTPN13-203ENST00000427191 SERPIND1P05546 499 aa15□□□□□ -0.01
PTPN13-203ENST00000427191 PPP2R1BP30154 601 aa15□□□□□ -0.01
PTPN13-203ENST00000427191 MAGEA4P43358 317 aa15□□□□□ -0.01
PTPN13-203ENST00000427191 EPHA7Q15375 998 aa15□□□□□ -0.01
PTPN13-203ENST00000427191 TKFCQ3LXA3 575 aa15□□□□□ -0.01
PTPN13-203ENST00000427191 COBLL1Q53SF7 1204 aa15□□□□□ -0.01
PTPN13-203ENST00000427191 ARMC4Q5T2S8 1044 aa15□□□□□ -0.01
PTPN13-203ENST00000427191 ZFP1Q6P2D0 407 aa15□□□□□ -0.01
PTPN13-203ENST00000427191 RFX8Q6ZV50 586 aa15□□□□□ -0.01
PTPN13-203ENST00000427191 KLHL25Q9H0H3 589 aa15□□□□□ -0.01
PTPN13-203ENST00000427191 MUC3BQ9H195 1237 aa15□□□□□ -0.01
PTPN13-203ENST00000427191 CACNA2D2Q9NY47 1150 aa15□□□□□ -0.01
PTPN13-203ENST00000427191 ZNF438Q7Z4V0 828 aa15□□□□□ -0.01
PTPN13-203ENST00000427191 SGMS1Q86VZ5 419 aa15□□□□□ -0.01
PTPN13-203ENST00000427191 SLC22A9Q8IVM8 553 aa15□□□□□ -0.01
PTPN13-203ENST00000427191 SEPT1Q8WYJ6 367 aa15□□□□□ -0.01
PTPN13-203ENST00000427191 LY9Q9HBG7 655 aa15□□□□□ -0.01
PTPN13-203ENST00000427191 MKL2Q9ULH7 1088 aa15□□□□□ -0.01
PTPN13-203ENST00000427191 DOLKQ9UPQ8 538 aa15□□□□□ -0.01
PTPN13-203ENST00000427191 KCNH4Q9UQ05 1017 aa15□□□□□ -0.01
PTPN13-203ENST00000427191 IGSF1Q8N6C5 1336 aa15□□□□□ -0.01
PTPN13-203ENST00000427191 IGF2BP3O00425 579 aaKnown RBP eCLIP15□□□□□ -0.01
PTPN13-203ENST00000427191 CSPG5O95196 566 aa15□□□□□ -0.01
PTPN13-203ENST00000427191 STAT5AP42229 794 aa15□□□□□ -0.01
PTPN13-203ENST00000427191 IL12RB1P42701 662 aa15□□□□□ -0.01
PTPN13-203ENST00000427191 FMO5P49326 533 aa15□□□□□ -0.01
PTPN13-203ENST00000427191 STAT5BP51692 787 aa15□□□□□ -0.01
PTPN13-203ENST00000427191 INAQ16352 499 aa15□□□□□ -0.01
PTPN13-203ENST00000427191 LRRC36Q1X8D7 754 aa15□□□□□ -0.01
PTPN13-203ENST00000427191 SETD9Q8NE22 299 aa15□□□□□ -0.01
PTPN13-203ENST00000427191 FLCNQ8NFG4 579 aa15□□□□□ -0.01
PTPN13-203ENST00000427191 FAM192AQ9GZU8 254 aa15□□□□□ -0.01
PTPN13-203ENST00000427191 CYP39A1Q9NYL5 469 aa15□□□□□ -0.01
PTPN13-203ENST00000427191 ZKSCAN7Q9P0L1 754 aaPredicted RBP15□□□□□ -0.01
PTPN13-203ENST00000427191 WHRNQ9P202 907 aa15□□□□□ -0.01
PTPN13-203ENST00000427191 NCK2O43639 380 aa14.99□□□□□ -0.01
PTPN13-203ENST00000427191 GARTP22102 1010 aa14.99□□□□□ -0.01
PTPN13-203ENST00000427191 TGFBR2P37173 567 aa14.99□□□□□ -0.01
PTPN13-203ENST00000427191 PRKAA2P54646 552 aa14.99□□□□□ -0.01
PTPN13-203ENST00000427191 EEPD1Q7L9B9 569 aa14.99□□□□□ -0.01
PTPN13-203ENST00000427191 DDX53Q86TM3 631 aaKnown RBP14.99□□□□□ -0.01
PTPN13-203ENST00000427191 AVENQ9NQS1 362 aaPredicted RBP14.99□□□□□ -0.01
PTPN13-203ENST00000427191 IARS2Q9NSE4 1012 aaKnown RBP14.99□□□□□ -0.01
PTPN13-203ENST00000427191 UBAP1Q9NZ09 502 aa14.99□□□□□ -0.01
PTPN13-203ENST00000427191 AAR2Q9Y312 384 aaKnown RBP14.99□□□□□ -0.01
PTPN13-203ENST00000427191 POLR1AO95602 1720 aaPredicted RBP14.99□□□□□ -0.01
PTPN13-203ENST00000427191 SFI1A8K8P3 1242 aa14.99□□□□□ -0.01
PTPN13-203ENST00000427191 DNALI1O14645 258 aaPredicted RBP14.99□□□□□ -0.01
PTPN13-203ENST00000427191 RPLP2P05387 115 aaKnown RBP14.99□□□□□ -0.01
PTPN13-203ENST00000427191 WEE2P0C1S8 567 aa14.99□□□□□ -0.01
PTPN13-203ENST00000427191 CCNI2Q6ZMN8 369 aaPredicted RBP14.99□□□□□ -0.01
PTPN13-203ENST00000427191 KDM7AQ6ZMT4 941 aa14.99□□□□□ -0.01
PTPN13-203ENST00000427191 CCDC81Q6ZN84 652 aa14.99□□□□□ -0.01
PTPN13-203ENST00000427191 ANKMY2Q8IV38 441 aa14.99□□□□□ -0.01
PTPN13-203ENST00000427191 TRMT2AQ8IZ69 625 aaKnown RBP14.99□□□□□ -0.01
PTPN13-203ENST00000427191 DNAJC7Q99615 494 aa14.99□□□□□ -0.01
PTPN13-203ENST00000427191 TRMT6Q9UJA5 497 aaKnown RBP14.99□□□□□ -0.01
PTPN13-203ENST00000427191 STX11O75558 287 aa14.99□□□□□ -0.01
PTPN13-203ENST00000427191 SRGNP10124 158 aa14.99□□□□□ -0.01
PTPN13-203ENST00000427191 CHI3L1P36222 383 aaPredicted RBP14.99□□□□□ -0.01
PTPN13-203ENST00000427191 NUDT2P50583 147 aa14.99□□□□□ -0.01
PTPN13-203ENST00000427191 PHACTR1Q9C0D0 580 aa14.99□□□□□ -0.01
PTPN13-203ENST00000427191 FLT1P17948 1338 aa14.99□□□□□ -0.01
PTPN13-203ENST00000427191 GAS2O43903 313 aaKnown RBP14.99□□□□□ -0.01
PTPN13-203ENST00000427191 CLPTM1O96005 669 aa14.99□□□□□ -0.01
PTPN13-203ENST00000427191 GH2P01242 217 aa14.99□□□□□ -0.01
PTPN13-203ENST00000427191 POTEIP0CG38 1075 aa14.99□□□□□ -0.01
PTPN13-203ENST00000427191 GRK3P35626 688 aa14.99□□□□□ -0.01
PTPN13-203ENST00000427191 MAD2L1Q13257 205 aaPredicted RBP14.99□□□□□ -0.01
PTPN13-203ENST00000427191 POTEGQ6S5H5 508 aa14.99□□□□□ -0.01
PTPN13-203ENST00000427191 TFB1MQ8WVM0 346 aaKnown RBP14.99□□□□□ -0.01
PTPN13-203ENST00000427191 LRRC1Q9BTT6 524 aa14.99□□□□□ -0.01
PTPN13-203ENST00000427191 MYLK2Q9H1R3 596 aa14.99□□□□□ -0.01
PTPN13-203ENST00000427191 ZFYVE1Q9HBF4 777 aa14.99□□□□□ -0.01
PTPN13-203ENST00000427191 EIF4ENIF1Q9NRA8 985 aaKnown RBP14.99□□□□□ -0.01
PTPN13-203ENST00000427191 NLRP1Q9C000 1473 aa14.99□□□□□ -0.01
PTPN13-203ENST00000427191 ASMTLO95671 621 aa14.99□□□□□ -0.01
PTPN13-203ENST00000427191 CTCFP49711 727 aaPredicted RBP14.99□□□□□ -0.01
PTPN13-203ENST00000427191 RCN1Q15293 331 aa14.99□□□□□ -0.01
PTPN13-203ENST00000427191 FAM180AQ6UWF9 173 aa14.99□□□□□ -0.01
PTPN13-203ENST00000427191 RINLQ6ZS11 566 aa14.99□□□□□ -0.01
PTPN13-203ENST00000427191 MASTLQ96GX5 879 aa14.99□□□□□ -0.01
PTPN13-203ENST00000427191 L3MBTL3Q96JM7 780 aaPredicted RBP14.99□□□□□ -0.01
PTPN13-203ENST00000427191 BDH2Q9BUT1 245 aa14.99□□□□□ -0.01
PTPN13-203ENST00000427191 OSBPL6Q9BZF3 934 aa14.99□□□□□ -0.01
PTPN13-203ENST00000427191 FHDC1Q9C0D6 1143 aaPredicted RBP14.99□□□□□ -0.01
PTPN13-203ENST00000427191 MMADHCQ9H3L0 296 aaPredicted RBP14.99□□□□□ -0.01
PTPN13-203ENST00000427191 USP17L10C9JJH3 530 aa14.99□□□□□ -0.01
PTPN13-203ENST00000427191 DDR2Q16832 855 aa14.99□□□□□ -0.01
PTPN13-203ENST00000427191 TMEM47Q9BQJ4 181 aa14.99□□□□□ -0.01
PTPN13-203ENST00000427191 ABCA8O94911 1581 aa14.99□□□□□ -0.01
PTPN13-203ENST00000427191 S100A9P06702 114 aaKnown RBP14.99□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms