RNA–Protein interactions for RNA: ENST00000425518.5

SMARCC1-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1, humanhuman

TSL 2

Gene SMARCC1, Length 3,827 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1-202ENST00000425518 OTUD4Q01804 1114 aaKnown RBP7.91□□□□□ -1.14
SMARCC1-202ENST00000425518 ZNF252P-AS1Q0IIN9 211 aa7.91□□□□□ -1.14
SMARCC1-202ENST00000425518 TTC17Q96AE7 1141 aa7.91□□□□□ -1.14
SMARCC1-202ENST00000425518 PAFAH2Q99487 392 aa7.91□□□□□ -1.14
SMARCC1-202ENST00000425518 OSBPL1AQ9BXW6 950 aa7.91□□□□□ -1.14
SMARCC1-202ENST00000425518 RPAP3Q9H6T3 665 aaPredicted RBP7.91□□□□□ -1.14
SMARCC1-202ENST00000425518 DRG1Q9Y295 367 aaKnown RBP7.91□□□□□ -1.14
SMARCC1-202ENST00000425518 TCRBV7S3A2A0A539 114 aa7.91□□□□□ -1.14
SMARCC1-202ENST00000425518 MT-ND3P03897 115 aa7.91□□□□□ -1.14
SMARCC1-202ENST00000425518 PSMA2P25787 234 aa7.91□□□□□ -1.14
SMARCC1-202ENST00000425518 PTPN4P29074 926 aa7.91□□□□□ -1.14
SMARCC1-202ENST00000425518 PHBP35232 272 aa7.91□□□□□ -1.14
SMARCC1-202ENST00000425518 ERFP50548 548 aa7.91□□□□□ -1.14
SMARCC1-202ENST00000425518 BASP1P80723 227 aaKnown RBP7.91□□□□□ -1.14
SMARCC1-202ENST00000425518 EMC2Q15006 297 aa7.91□□□□□ -1.14
SMARCC1-202ENST00000425518 RFWD3Q6PCD5 774 aa7.91□□□□□ -1.14
SMARCC1-202ENST00000425518 RFX8Q6ZV50 586 aa7.91□□□□□ -1.14
SMARCC1-202ENST00000425518 TMEM35BQ8NCS4 154 aa7.91□□□□□ -1.14
SMARCC1-202ENST00000425518 ASAP3Q8TDY4 903 aa7.91□□□□□ -1.14
SMARCC1-202ENST00000425518 INPP5DQ92835 1189 aa7.91□□□□□ -1.14
SMARCC1-202ENST00000425518 MANSC1Q9H8J5 431 aa7.91□□□□□ -1.14
SMARCC1-202ENST00000425518 SLC9A2Q9UBY0 812 aa7.91□□□□□ -1.14
SMARCC1-202ENST00000425518 SLC24A2Q9UI40 661 aa7.91□□□□□ -1.14
SMARCC1-202ENST00000425518 RABGEF1Q9UJ41 708 aa7.91□□□□□ -1.14
SMARCC1-202ENST00000425518 CHMP2BQ9UQN3 213 aa7.91□□□□□ -1.14
SMARCC1-202ENST00000425518 CLUHO75153 1309 aa7.91□□□□□ -1.14
SMARCC1-202ENST00000425518 C2orf71A6NGG8 1288 aa7.91□□□□□ -1.14
SMARCC1-202ENST00000425518 DKC1O60832 514 aaKnown RBP eCLIP7.91□□□□□ -1.141e-11■■□□□ 11.4
SMARCC1-202ENST00000425518 STBD1O95210 358 aa7.91□□□□□ -1.14
SMARCC1-202ENST00000425518 CALB1P05937 261 aa7.91□□□□□ -1.14
SMARCC1-202ENST00000425518 TBXAS1P24557 533 aaPredicted RBP7.91□□□□□ -1.14
SMARCC1-202ENST00000425518 MARK3P27448 753 aa7.91□□□□□ -1.14
SMARCC1-202ENST00000425518 RXRBP28702 533 aa7.91□□□□□ -1.14
SMARCC1-202ENST00000425518 CDKN2BP42772 138 aa7.91□□□□□ -1.14
SMARCC1-202ENST00000425518 PTDSS1P48651 473 aaKnown RBP7.91□□□□□ -1.14
SMARCC1-202ENST00000425518 MYL6P60660 151 aa7.91□□□□□ -1.14
SMARCC1-202ENST00000425518 OASLQ15646 514 aaKnown RBP7.91□□□□□ -1.14
SMARCC1-202ENST00000425518 SCYL3Q8IZE3 742 aa7.91□□□□□ -1.14
SMARCC1-202ENST00000425518 VPS52Q8N1B4 723 aa7.91□□□□□ -1.14
SMARCC1-202ENST00000425518 FAM71DQ8N9W8 422 aa7.91□□□□□ -1.14
SMARCC1-202ENST00000425518 ATP11CQ8NB49 1132 aa7.91□□□□□ -1.14
SMARCC1-202ENST00000425518 PCDH9Q9HC56 1237 aa7.91□□□□□ -1.14
SMARCC1-202ENST00000425518 IKBKGQ9Y6K9 419 aa7.91□□□□□ -1.14
SMARCC1-202ENST00000425518 NUMBLQ9Y6R0 609 aa7.91□□□□□ -1.14
SMARCC1-202ENST00000425518 QSER1Q2KHR3 1735 aa7.91□□□□□ -1.14
SMARCC1-202ENST00000425518 TBC1D12O60347 775 aa7.9□□□□□ -1.14
SMARCC1-202ENST00000425518 SMNDC1O75940 238 aaKnown RBP eCLIP7.9□□□□□ -1.145e-12■■■■□ 23.6
SMARCC1-202ENST00000425518 WFS1O76024 890 aa7.9□□□□□ -1.14
SMARCC1-202ENST00000425518 ZWINTO95229 277 aa7.9□□□□□ -1.14
SMARCC1-202ENST00000425518 LUC7L3O95232 432 aaKnown RBP7.9□□□□□ -1.14
SMARCC1-202ENST00000425518 GNAZP19086 355 aa7.9□□□□□ -1.14
SMARCC1-202ENST00000425518 RFC1P35251 1148 aaPredicted RBP7.9□□□□□ -1.14
SMARCC1-202ENST00000425518 RPL22P35268 128 aaKnown RBP7.9□□□□□ -1.14
SMARCC1-202ENST00000425518 ARFIP2P53365 341 aa7.9□□□□□ -1.14
SMARCC1-202ENST00000425518 BLMHQ13867 455 aa7.9□□□□□ -1.14
SMARCC1-202ENST00000425518 MUM1Q2TAK8 710 aa7.9□□□□□ -1.14
SMARCC1-202ENST00000425518 KHDC1Q4VXA5 237 aaKnown RBP7.9□□□□□ -1.14
SMARCC1-202ENST00000425518 SLC45A4Q5BKX6 768 aa7.9□□□□□ -1.14
SMARCC1-202ENST00000425518 CLNKQ7Z7G1 428 aa7.9□□□□□ -1.14
SMARCC1-202ENST00000425518 EMC1Q8N766 993 aa7.9□□□□□ -1.14
SMARCC1-202ENST00000425518 DTX3LQ8TDB6 740 aa7.9□□□□□ -1.14
SMARCC1-202ENST00000425518 CPT1BQ92523 772 aa7.9□□□□□ -1.14
SMARCC1-202ENST00000425518 PTPRN2Q92932 1015 aa7.9□□□□□ -1.14
SMARCC1-202ENST00000425518 TRIM55Q9BYV6 548 aa7.9□□□□□ -1.14
SMARCC1-202ENST00000425518 SYNCQ9H7C4 482 aa7.9□□□□□ -1.14
SMARCC1-202ENST00000425518 FBXO6Q9NRD1 293 aaPredicted RBP7.9□□□□□ -1.14
SMARCC1-202ENST00000425518 METTL5Q9NRN9 209 aaKnown RBP7.9□□□□□ -1.14
SMARCC1-202ENST00000425518 ARL8BQ9NVJ2 186 aa7.9□□□□□ -1.14
SMARCC1-202ENST00000425518 NXF1Q9UBU9 619 aaKnown RBP7.9□□□□□ -1.14
SMARCC1-202ENST00000425518 SHOC2Q9UQ13 582 aa7.9□□□□□ -1.14
SMARCC1-202ENST00000425518 H0YCG3 227 aa7.9□□□□□ -1.14
SMARCC1-202ENST00000425518 C2CD2LO14523 706 aa7.9□□□□□ -1.14
SMARCC1-202ENST00000425518 STAM2O75886 525 aa7.9□□□□□ -1.14
SMARCC1-202ENST00000425518 KCNA2P16389 499 aa7.9□□□□□ -1.14
SMARCC1-202ENST00000425518 TNFSF9P41273 254 aa7.9□□□□□ -1.14
SMARCC1-202ENST00000425518 MCCD1P59942 119 aaPredicted RBP7.9□□□□□ -1.14
SMARCC1-202ENST00000425518 OSTNP61366 133 aa7.9□□□□□ -1.14
SMARCC1-202ENST00000425518 TFAMQ00059 246 aaKnown RBP7.9□□□□□ -1.14
SMARCC1-202ENST00000425518 MCL1Q07820 350 aa7.9□□□□□ -1.14
SMARCC1-202ENST00000425518 ORC1Q13415 861 aa7.9□□□□□ -1.14
SMARCC1-202ENST00000425518 TRPC3Q13507 836 aa7.9□□□□□ -1.14
SMARCC1-202ENST00000425518 XKR3Q5GH77 459 aa7.9□□□□□ -1.14
SMARCC1-202ENST00000425518 EFHC2Q5JST6 749 aa7.9□□□□□ -1.14
SMARCC1-202ENST00000425518 SNRNP48Q6IEG0 339 aaKnown RBP7.9□□□□□ -1.14
SMARCC1-202ENST00000425518 DSTYKQ6XUX3 929 aa7.9□□□□□ -1.14
SMARCC1-202ENST00000425518 RGS9BPQ6ZS82 235 aa7.9□□□□□ -1.14
SMARCC1-202ENST00000425518 DPH6Q7L8W6 267 aa7.9□□□□□ -1.14
SMARCC1-202ENST00000425518 RFX6Q8HWS3 928 aa7.9□□□□□ -1.14
SMARCC1-202ENST00000425518 LMNTD2Q8IXW0 634 aa7.9□□□□□ -1.14
SMARCC1-202ENST00000425518 PPIL6Q8IXY8 311 aa7.9□□□□□ -1.14
SMARCC1-202ENST00000425518 PDIK1LQ8N165 341 aa7.9□□□□□ -1.14
SMARCC1-202ENST00000425518 LPAR1Q92633 364 aa7.9□□□□□ -1.14
SMARCC1-202ENST00000425518 MCUR1Q96AQ8 359 aa7.9□□□□□ -1.14
SMARCC1-202ENST00000425518 ZNF668Q96K58 619 aaPredicted RBP7.9□□□□□ -1.14
SMARCC1-202ENST00000425518 FAM111AQ96PZ2 611 aa7.9□□□□□ -1.14
SMARCC1-202ENST00000425518 CALN1Q9BXU9 219 aa7.9□□□□□ -1.14
SMARCC1-202ENST00000425518 MTMR12Q9C0I1 747 aa7.9□□□□□ -1.14
SMARCC1-202ENST00000425518 PDLIM7Q9NR12 457 aa7.9□□□□□ -1.14
SMARCC1-202ENST00000425518 TJP2Q9UDY2 1190 aa7.9□□□□□ -1.14
SMARCC1-202ENST00000425518 XPO7Q9UIA9 1087 aaKnown RBP7.9□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms