RNA–Protein interactions for RNA: ENST00000425319.1

HLA-DQB3-203, Transcript of major histocompatibility complex, class II, DQ beta 3, humanhuman

BASIC

Gene HLA-DQB3, Length 356 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB3-203ENST00000425319 CREB5Q02930 508 aa13.2□□□□□ -0.3
HLA-DQB3-203ENST00000425319 FAM160A1Q05DH4 1040 aa13.2□□□□□ -0.3
HLA-DQB3-203ENST00000425319 MYO1EQ12965 1108 aa13.2□□□□□ -0.3
HLA-DQB3-203ENST00000425319 BYSLQ13895 437 aaKnown RBP13.2□□□□□ -0.3
HLA-DQB3-203ENST00000425319 KCNB1Q14721 858 aa13.2□□□□□ -0.3
HLA-DQB3-203ENST00000425319 TMEM119Q4V9L6 283 aa13.2□□□□□ -0.3
HLA-DQB3-203ENST00000425319 ARSHQ5FYA8 562 aa13.2□□□□□ -0.3
HLA-DQB3-203ENST00000425319 N4BP2L1Q5TBK1 243 aaPredicted RBP13.2□□□□□ -0.3
HLA-DQB3-203ENST00000425319 C4orf50Q6ZRC1 276 aa13.2□□□□□ -0.3
HLA-DQB3-203ENST00000425319 NUDT18Q6ZVK8 323 aa13.2□□□□□ -0.3
HLA-DQB3-203ENST00000425319 SYT13Q7L8C5 426 aa13.2□□□□□ -0.3
HLA-DQB3-203ENST00000425319 KBTBD6Q86V97 674 aa13.2□□□□□ -0.3
HLA-DQB3-203ENST00000425319 OR10T2Q8NGX3 314 aa13.2□□□□□ -0.3
HLA-DQB3-203ENST00000425319 SPATA18Q8TC71 538 aa13.2□□□□□ -0.3
HLA-DQB3-203ENST00000425319 LARP4BQ92615 738 aaKnown RBP13.2□□□□□ -0.3
HLA-DQB3-203ENST00000425319 PI4K2AQ9BTU6 479 aa13.2□□□□□ -0.3
HLA-DQB3-203ENST00000425319 MKNK1Q9BUB5 465 aa13.2□□□□□ -0.3
HLA-DQB3-203ENST00000425319 HAPLN2Q9GZV7 340 aa13.2□□□□□ -0.3
HLA-DQB3-203ENST00000425319 TRPC7Q9HCX4 862 aa13.2□□□□□ -0.3
HLA-DQB3-203ENST00000425319 ABCB6Q9NP58 842 aa13.2□□□□□ -0.3
HLA-DQB3-203ENST00000425319 SEL1LQ9UBV2 794 aa13.2□□□□□ -0.3
HLA-DQB3-203ENST00000425319 ZSCAN21Q9Y5A6 473 aaPredicted RBP13.2□□□□□ -0.3
HLA-DQB3-203ENST00000425319 PCDHB13Q9Y5F0 798 aa13.2□□□□□ -0.3
HLA-DQB3-203ENST00000425319 VWA8A3KMH1 1905 aa13.19□□□□□ -0.3
HLA-DQB3-203ENST00000425319 MYMKA6NI61 221 aa13.19□□□□□ -0.3
HLA-DQB3-203ENST00000425319 MAP3K13O43283 966 aa13.19□□□□□ -0.3
HLA-DQB3-203ENST00000425319 NFATC1O95644 943 aa13.19□□□□□ -0.3
HLA-DQB3-203ENST00000425319 NFICP08651 508 aa13.19□□□□□ -0.3
HLA-DQB3-203ENST00000425319 ATF6P18850 670 aa13.19□□□□□ -0.3
HLA-DQB3-203ENST00000425319 DPP6P42658 865 aa13.19□□□□□ -0.3
HLA-DQB3-203ENST00000425319 ZNF131P52739 623 aa13.19□□□□□ -0.3
HLA-DQB3-203ENST00000425319 RBP5P82980 135 aa13.19□□□□□ -0.3
HLA-DQB3-203ENST00000425319 TFAMQ00059 246 aaKnown RBP13.19□□□□□ -0.3
HLA-DQB3-203ENST00000425319 MCM6Q14566 821 aa13.19□□□□□ -0.3
HLA-DQB3-203ENST00000425319 MTF1Q14872 753 aa13.19□□□□□ -0.3
HLA-DQB3-203ENST00000425319 MAPRE1Q15691 268 aaKnown RBP13.19□□□□□ -0.3
HLA-DQB3-203ENST00000425319 LARP1BQ659C4 914 aaKnown RBP13.19□□□□□ -0.3
HLA-DQB3-203ENST00000425319 LMBRD2Q68DH5 695 aaPredicted RBP13.19□□□□□ -0.3
HLA-DQB3-203ENST00000425319 TXNDC8Q6A555 127 aa13.19□□□□□ -0.3
HLA-DQB3-203ENST00000425319 FSTL4Q6MZW2 842 aa13.19□□□□□ -0.3
HLA-DQB3-203ENST00000425319 STXBP4Q6ZWJ1 553 aa13.19□□□□□ -0.3
HLA-DQB3-203ENST00000425319 TTC9BQ8N6N2 239 aa13.19□□□□□ -0.3
HLA-DQB3-203ENST00000425319 TSTD1Q8NFU3 115 aa13.19□□□□□ -0.3
HLA-DQB3-203ENST00000425319 RPLP0P6Q8NHW5 317 aa13.19□□□□□ -0.3
HLA-DQB3-203ENST00000425319 RAD54LQ92698 747 aa13.19□□□□□ -0.3
HLA-DQB3-203ENST00000425319 USP13Q92995 863 aaPredicted RBP13.19□□□□□ -0.3
HLA-DQB3-203ENST00000425319 LRRC3BQ96PB8 259 aa13.19□□□□□ -0.3
HLA-DQB3-203ENST00000425319 ACCSQ96QU6 501 aa13.19□□□□□ -0.3
HLA-DQB3-203ENST00000425319 LSM14BQ9BX40 385 aaKnown RBP13.19□□□□□ -0.3
HLA-DQB3-203ENST00000425319 SMG9Q9H0W8 520 aaKnown RBP13.19□□□□□ -0.3
HLA-DQB3-203ENST00000425319 ST6GALNAC4Q9H4F1 302 aa13.19□□□□□ -0.3
HLA-DQB3-203ENST00000425319 ECT2Q9H8V3 914 aa13.19□□□□□ -0.3
HLA-DQB3-203ENST00000425319 MRPL44Q9H9J2 332 aaKnown RBP13.19□□□□□ -0.3
HLA-DQB3-203ENST00000425319 IL21Q9HBE4 155 aa13.19□□□□□ -0.3
HLA-DQB3-203ENST00000425319 DDX43Q9NXZ2 648 aaKnown RBP13.19□□□□□ -0.3
HLA-DQB3-203ENST00000425319 AGAP1Q9UPQ3 857 aa13.19□□□□□ -0.3
HLA-DQB3-203ENST00000425319 SMC3Q9UQE7 1217 aa13.19□□□□□ -0.3
HLA-DQB3-203ENST00000425319 OTOGLQ3ZCN5 2332 aa13.19□□□□□ -0.3
HLA-DQB3-203ENST00000425319 PPEF2O14830 753 aa13.18□□□□□ -0.3
HLA-DQB3-203ENST00000425319 KCNK5O95279 499 aa13.18□□□□□ -0.3
HLA-DQB3-203ENST00000425319 KRT19P08727 400 aa13.18□□□□□ -0.3
HLA-DQB3-203ENST00000425319 GAP43P17677 238 aa13.18□□□□□ -0.3
HLA-DQB3-203ENST00000425319 PFKLP17858 780 aa13.18□□□□□ -0.3
HLA-DQB3-203ENST00000425319 HDCP19113 662 aa13.18□□□□□ -0.3
HLA-DQB3-203ENST00000425319 ANXA13P27216 316 aa13.18□□□□□ -0.3
HLA-DQB3-203ENST00000425319 NMT1P30419 496 aaKnown RBP13.18□□□□□ -0.3
HLA-DQB3-203ENST00000425319 SHC2P98077 582 aa13.18□□□□□ -0.3
HLA-DQB3-203ENST00000425319 ALCAMQ13740 583 aa13.18□□□□□ -0.3
HLA-DQB3-203ENST00000425319 DMC1Q14565 340 aa13.18□□□□□ -0.3
HLA-DQB3-203ENST00000425319 RABEP1Q15276 862 aa13.18□□□□□ -0.3
HLA-DQB3-203ENST00000425319 SURF1Q15526 300 aa13.18□□□□□ -0.3
HLA-DQB3-203ENST00000425319 CCDC6Q16204 474 aa13.18□□□□□ -0.3
HLA-DQB3-203ENST00000425319 PLK5Q496M5 336 aa13.18□□□□□ -0.3
HLA-DQB3-203ENST00000425319 PREPLQ4J6C6 727 aaPredicted RBP13.18□□□□□ -0.3
HLA-DQB3-203ENST00000425319 SV2BQ7L1I2 683 aa13.18□□□□□ -0.3
HLA-DQB3-203ENST00000425319 DPH6Q7L8W6 267 aa13.18□□□□□ -0.3
HLA-DQB3-203ENST00000425319 SCN4BQ8IWT1 228 aa13.18□□□□□ -0.3
HLA-DQB3-203ENST00000425319 CSGALNACT2Q8N6G5 542 aa13.18□□□□□ -0.3
HLA-DQB3-203ENST00000425319 NOC3LQ8WTT2 800 aaKnown RBP13.18□□□□□ -0.3
HLA-DQB3-203ENST00000425319 LEO1Q8WVC0 666 aaPredicted RBP13.18□□□□□ -0.3
HLA-DQB3-203ENST00000425319 OSCP1Q8WVF1 389 aa13.18□□□□□ -0.3
HLA-DQB3-203ENST00000425319 TRMT2BQ96GJ1 504 aaKnown RBP13.18□□□□□ -0.3
HLA-DQB3-203ENST00000425319 FUBP3Q96I24 572 aaKnown RBP eCLIP13.18□□□□□ -0.3
HLA-DQB3-203ENST00000425319 CEP295NLQ96MC4 621 aa13.18□□□□□ -0.3
HLA-DQB3-203ENST00000425319 MAGEC2Q9UBF1 373 aaPredicted RBP13.18□□□□□ -0.3
HLA-DQB3-203ENST00000425319 EBF1Q9UH73 591 aa13.18□□□□□ -0.3
HLA-DQB3-203ENST00000425319 DOCK6Q96HP0 2047 aa13.18□□□□□ -0.3
HLA-DQB3-203ENST00000425319 PATJQ8NI35 1801 aa13.18□□□□□ -0.3
HLA-DQB3-203ENST00000425319 ANKRD63C9JTQ0 380 aa13.17□□□□□ -0.3
HLA-DQB3-203ENST00000425319 SLC9A3R1O14745 358 aaPredicted RBP13.17□□□□□ -0.3
HLA-DQB3-203ENST00000425319 KIAA0391O15091 583 aaKnown RBP13.17□□□□□ -0.3
HLA-DQB3-203ENST00000425319 EGFP01133 1207 aa13.17□□□□□ -0.3
HLA-DQB3-203ENST00000425319 TMEM191BP0C7N4 346 aa13.17□□□□□ -0.3
HLA-DQB3-203ENST00000425319 GJB2P29033 226 aa13.17□□□□□ -0.3
HLA-DQB3-203ENST00000425319 GJA4P35212 333 aa13.17□□□□□ -0.3
HLA-DQB3-203ENST00000425319 PPP3CCP48454 512 aa13.17□□□□□ -0.3
HLA-DQB3-203ENST00000425319 NOVA1P51513 510 aaKnown RBP13.17□□□□□ -0.3
HLA-DQB3-203ENST00000425319 DDR2Q16832 855 aa13.17□□□□□ -0.3
HLA-DQB3-203ENST00000425319 PLA2G2CQ5R387 149 aa13.17□□□□□ -0.3
HLA-DQB3-203ENST00000425319 TRIM68Q6AZZ1 485 aa13.17□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms