RNA–Protein interactions for RNA: ENST00000424964.6

TMEM248-204, Transcript of transmembrane protein 248, humanhuman

TSL 4

Gene TMEM248, Length 536 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM248-204ENST00000424964 FUCA2Q9BTY2 467 aa15.82■□□□□ 0.12
TMEM248-204ENST00000424964 BCO2Q9BYV7 579 aa15.82■□□□□ 0.12
TMEM248-204ENST00000424964 CRISPLD1Q9H336 500 aa15.82■□□□□ 0.12
TMEM248-204ENST00000424964 NME7Q9Y5B8 376 aa15.82■□□□□ 0.12
TMEM248-204ENST00000424964 INSL5Q9Y5Q6 135 aa15.82■□□□□ 0.12
TMEM248-204ENST00000424964 SMTNL1A8MU46 457 aa15.81■□□□□ 0.12
TMEM248-204ENST00000424964 BMP1P13497 986 aa15.81■□□□□ 0.12
TMEM248-204ENST00000424964 PTPN1P18031 435 aaKnown RBP15.81■□□□□ 0.12
TMEM248-204ENST00000424964 CDK11BP21127 795 aaKnown RBP15.81■□□□□ 0.12
TMEM248-204ENST00000424964 TUFMP49411 452 aaKnown RBP15.81■□□□□ 0.12
TMEM248-204ENST00000424964 ZNF165P49910 485 aa15.81■□□□□ 0.12
TMEM248-204ENST00000424964 NDST1P52848 882 aa15.81■□□□□ 0.12
TMEM248-204ENST00000424964 CYP27A1Q02318 531 aa15.81■□□□□ 0.12
TMEM248-204ENST00000424964 TWF1Q12792 350 aa15.81■□□□□ 0.12
TMEM248-204ENST00000424964 MAPRE1Q15691 268 aaKnown RBP15.81■□□□□ 0.12
TMEM248-204ENST00000424964 SMAD2Q15796 467 aaKnown RBP15.81■□□□□ 0.12
TMEM248-204ENST00000424964 CCDC142Q17RM4 750 aa15.81■□□□□ 0.12
TMEM248-204ENST00000424964 VWA3BQ502W6 1294 aa15.81■□□□□ 0.12
TMEM248-204ENST00000424964 MDH1BQ5I0G3 518 aa15.81■□□□□ 0.12
TMEM248-204ENST00000424964 C2orf16Q68DN1 1984 aa15.81■□□□□ 0.12
TMEM248-204ENST00000424964 FAM171BQ6P995 826 aa15.81■□□□□ 0.12
TMEM248-204ENST00000424964 C4orf50Q6ZRC1 276 aa15.81■□□□□ 0.12
TMEM248-204ENST00000424964 ELMOD1Q8N336 334 aa15.81■□□□□ 0.12
TMEM248-204ENST00000424964 TTC9BQ8N6N2 239 aa15.81■□□□□ 0.12
TMEM248-204ENST00000424964 B3GALNT2Q8NCR0 500 aa15.81■□□□□ 0.12
TMEM248-204ENST00000424964 DOCK6Q96HP0 2047 aa15.81■□□□□ 0.12
TMEM248-204ENST00000424964 TNIP3Q96KP6 325 aa15.81■□□□□ 0.12
TMEM248-204ENST00000424964 NECTIN4Q96NY8 510 aa15.81■□□□□ 0.12
TMEM248-204ENST00000424964 PKMYT1Q99640 499 aa15.81■□□□□ 0.12
TMEM248-204ENST00000424964 SEPT5Q99719 369 aaPredicted RBP15.81■□□□□ 0.12
TMEM248-204ENST00000424964 CRACR2AQ9BSW2 395 aa15.81■□□□□ 0.12
TMEM248-204ENST00000424964 INTS2Q9H0H0 1204 aaKnown RBP15.81■□□□□ 0.12
TMEM248-204ENST00000424964 DPEP3Q9H4B8 488 aa15.81■□□□□ 0.12
TMEM248-204ENST00000424964 CRTAC1Q9NQ79 661 aa15.81■□□□□ 0.12
TMEM248-204ENST00000424964 YIPF1Q9Y548 306 aa15.81■□□□□ 0.12
TMEM248-204ENST00000424964 SOAT2O75908 522 aa15.8■□□□□ 0.12
TMEM248-204ENST00000424964 TPM2P07951 284 aa15.8■□□□□ 0.12
TMEM248-204ENST00000424964 TRIM21P19474 475 aaKnown RBP15.8■□□□□ 0.12
TMEM248-204ENST00000424964 EPHB3P54753 998 aa15.8■□□□□ 0.12
TMEM248-204ENST00000424964 PLD1Q13393 1074 aa15.8■□□□□ 0.12
TMEM248-204ENST00000424964 ORC1Q13415 861 aa15.8■□□□□ 0.12
TMEM248-204ENST00000424964 CUL2Q13617 745 aa15.8■□□□□ 0.12
TMEM248-204ENST00000424964 CDKAL1Q5VV42 579 aa15.8■□□□□ 0.12
TMEM248-204ENST00000424964 GBP6Q6ZN66 633 aa15.8■□□□□ 0.12
TMEM248-204ENST00000424964 GRASPQ7Z6J2 395 aaPredicted RBP15.8■□□□□ 0.12
TMEM248-204ENST00000424964 ACOT1Q86TX2 421 aa15.8■□□□□ 0.12
TMEM248-204ENST00000424964 UNC93AQ86WB7 457 aa15.8■□□□□ 0.12
TMEM248-204ENST00000424964 PPM1KQ8N3J5 372 aa15.8■□□□□ 0.12
TMEM248-204ENST00000424964 ANKRD20A12PQ8NF67 263 aa15.8■□□□□ 0.12
TMEM248-204ENST00000424964 LMO3Q8TAP4 145 aa15.8■□□□□ 0.12
TMEM248-204ENST00000424964 MYCBPAPQ8TBZ2 947 aa15.8■□□□□ 0.12
TMEM248-204ENST00000424964 FAM200AQ8TCP9 573 aa15.8■□□□□ 0.12
TMEM248-204ENST00000424964 MYLPFQ96A32 169 aa15.8■□□□□ 0.12
TMEM248-204ENST00000424964 ZNF512Q96ME7 567 aaPredicted RBP15.8■□□□□ 0.12
TMEM248-204ENST00000424964 LPIN3Q9BQK8 851 aa15.8■□□□□ 0.12
TMEM248-204ENST00000424964 BPIFA3Q9BQP9 254 aa15.8■□□□□ 0.12
TMEM248-204ENST00000424964 RHOBTB2Q9BYZ6 727 aa15.8■□□□□ 0.12
TMEM248-204ENST00000424964 DNAI2Q9GZS0 605 aa15.8■□□□□ 0.12
TMEM248-204ENST00000424964 NDST4Q9H3R1 872 aa15.8■□□□□ 0.12
TMEM248-204ENST00000424964 POMKQ9H5K3 350 aa15.8■□□□□ 0.12
TMEM248-204ENST00000424964 TAB2Q9NYJ8 693 aa15.8■□□□□ 0.12
TMEM248-204ENST00000424964 GCNT4Q9P109 453 aa15.8■□□□□ 0.12
TMEM248-204ENST00000424964 HSFX1Q9UBD0 423 aa15.8■□□□□ 0.12
TMEM248-204ENST00000424964 BECN2A8MW95 431 aa15.79■□□□□ 0.12
TMEM248-204ENST00000424964 PAPLNO95428 1278 aa15.79■□□□□ 0.12
TMEM248-204ENST00000424964 HAPLN1P10915 354 aaPredicted RBP15.79■□□□□ 0.12
TMEM248-204ENST00000424964 TBXAS1P24557 533 aaPredicted RBP15.79■□□□□ 0.12
TMEM248-204ENST00000424964 CYP2F1P24903 491 aa15.79■□□□□ 0.12
TMEM248-204ENST00000424964 YWHAEP62258 255 aaKnown RBP15.79■□□□□ 0.12
TMEM248-204ENST00000424964 INCA1Q0VD86 236 aa15.79■□□□□ 0.12
TMEM248-204ENST00000424964 NCAPHQ15003 741 aa15.79■□□□□ 0.12
TMEM248-204ENST00000424964 KRT31Q15323 416 aa15.79■□□□□ 0.12
TMEM248-204ENST00000424964 EXOC3L4Q17RC7 722 aa15.79■□□□□ 0.12
TMEM248-204ENST00000424964 MIIPQ5JXC2 388 aa15.79■□□□□ 0.12
TMEM248-204ENST00000424964 IQCEQ6IPM2 695 aa15.79■□□□□ 0.12
TMEM248-204ENST00000424964 TTC39CQ8N584 583 aa15.79■□□□□ 0.12
TMEM248-204ENST00000424964 PCED1BQ96HM7 432 aa15.79■□□□□ 0.12
TMEM248-204ENST00000424964 ARID3AQ99856 593 aa15.79■□□□□ 0.12
TMEM248-204ENST00000424964 NT5C1AQ9BXI3 368 aa15.79■□□□□ 0.12
TMEM248-204ENST00000424964 VPS16Q9H269 839 aa15.79■□□□□ 0.12
TMEM248-204ENST00000424964 ABCB6Q9NP58 842 aa15.79■□□□□ 0.12
TMEM248-204ENST00000424964 CISHQ9NSE2 258 aa15.79■□□□□ 0.12
TMEM248-204ENST00000424964 HCFC1R1Q9NWW0 138 aa15.79■□□□□ 0.12
TMEM248-204ENST00000424964 HMGXB4Q9UGU5 601 aa15.79■□□□□ 0.12
TMEM248-204ENST00000424964 XIRP2A4UGR9 3374 aa15.78■□□□□ 0.12
TMEM248-204ENST00000424964 GTPBP10A4D1E9 387 aaKnown RBP15.78■□□□□ 0.12
TMEM248-204ENST00000424964 CILPO75339 1184 aa15.78■□□□□ 0.12
TMEM248-204ENST00000424964 POU2F2P09086 479 aa15.78■□□□□ 0.12
TMEM248-204ENST00000424964 PTPN2P17706 415 aa15.78■□□□□ 0.12
TMEM248-204ENST00000424964 BDNFP23560 247 aa15.78■□□□□ 0.12
TMEM248-204ENST00000424964 NTHL1P78549 312 aa15.78■□□□□ 0.12
TMEM248-204ENST00000424964 VEPH1Q14D04 833 aa15.78■□□□□ 0.12
TMEM248-204ENST00000424964 TAF12Q16514 161 aa15.78■□□□□ 0.12
TMEM248-204ENST00000424964 ZNF394Q53GI3 561 aa15.78■□□□□ 0.12
TMEM248-204ENST00000424964 RRAGAQ7L523 313 aa15.78■□□□□ 0.12
TMEM248-204ENST00000424964 SCN4BQ8IWT1 228 aa15.78■□□□□ 0.12
TMEM248-204ENST00000424964 DHX40Q8IX18 779 aaKnown RBP15.78■□□□□ 0.12
TMEM248-204ENST00000424964 CRYBG2Q8N1P7 616 aa15.78■□□□□ 0.12
TMEM248-204ENST00000424964 GIPC2Q8TF65 315 aa15.78■□□□□ 0.12
TMEM248-204ENST00000424964 FUBP3Q96I24 572 aaKnown RBP eCLIP15.78■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms