RNA–Protein interactions for RNA: ENST00000423161.3

SREBF1-206, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 3

Gene SREBF1, Length 1,058 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-206ENST00000423161 PRPF40AO75400 957 aaKnown RBP19.87■□□□□ 0.77
SREBF1-206ENST00000423161 CTHP32929 405 aa19.87■□□□□ 0.77
SREBF1-206ENST00000423161 GPR15P49685 360 aa19.87■□□□□ 0.77
SREBF1-206ENST00000423161 NRLP54845 237 aa19.87■□□□□ 0.77
SREBF1-206ENST00000423161 PLCB2Q00722 1185 aa19.87■□□□□ 0.77
SREBF1-206ENST00000423161 SCARA3Q6AZY7 606 aa19.87■□□□□ 0.77
SREBF1-206ENST00000423161 TXNDC11Q6PKC3 985 aa19.87■□□□□ 0.77
SREBF1-206ENST00000423161 STXBP4Q6ZWJ1 553 aa19.87■□□□□ 0.77
SREBF1-206ENST00000423161 RALGPS2Q86X27 583 aaPredicted RBP19.87■□□□□ 0.77
SREBF1-206ENST00000423161 CMTM8Q8IZV2 173 aa19.87■□□□□ 0.77
SREBF1-206ENST00000423161 TMEM86AQ8N2M4 240 aa19.87■□□□□ 0.77
SREBF1-206ENST00000423161 STKLD1Q8NE28 680 aa19.87■□□□□ 0.77
SREBF1-206ENST00000423161 CXorf38Q8TB03 319 aa19.87■□□□□ 0.77
SREBF1-206ENST00000423161 LEO1Q8WVC0 666 aaPredicted RBP19.87■□□□□ 0.77
SREBF1-206ENST00000423161 ACBD6Q9BR61 282 aa19.87■□□□□ 0.77
SREBF1-206ENST00000423161 SLC46A2Q9BY10 475 aa19.87■□□□□ 0.77
SREBF1-206ENST00000423161 LRRC27Q9C0I9 530 aa19.87■□□□□ 0.77
SREBF1-206ENST00000423161 TNMDQ9H2S6 317 aa19.87■□□□□ 0.77
SREBF1-206ENST00000423161 RBM12Q9NTZ6 932 aaKnown RBP19.87■□□□□ 0.77
SREBF1-206ENST00000423161 ZMYM5Q9UJ78 669 aa19.87■□□□□ 0.77
SREBF1-206ENST00000423161 SNX9Q9Y5X1 595 aa19.87■□□□□ 0.77
SREBF1-206ENST00000423161 KIAA0391O15091 583 aaKnown RBP19.86■□□□□ 0.77
SREBF1-206ENST00000423161 CSH1P0DML2 217 aa19.86■□□□□ 0.77
SREBF1-206ENST00000423161 CSH2P0DML3 217 aa19.86■□□□□ 0.77
SREBF1-206ENST00000423161 HMGA1P17096 107 aaKnown RBP19.86■□□□□ 0.77
SREBF1-206ENST00000423161 ACAT1P24752 427 aaKnown RBP19.86■□□□□ 0.77
SREBF1-206ENST00000423161 NLRP12P59046 1061 aa19.86■□□□□ 0.77
SREBF1-206ENST00000423161 RBP5P82980 135 aa19.86■□□□□ 0.77
SREBF1-206ENST00000423161 MYL7Q01449 175 aa19.86■□□□□ 0.77
SREBF1-206ENST00000423161 SATB1Q01826 763 aa19.86■□□□□ 0.77
SREBF1-206ENST00000423161 GAS6Q14393 721 aa19.86■□□□□ 0.77
SREBF1-206ENST00000423161 E2F4Q16254 413 aa19.86■□□□□ 0.77
SREBF1-206ENST00000423161 INTS6LQ5JSJ4 861 aaKnown RBP19.86■□□□□ 0.77
SREBF1-206ENST00000423161 LMBRD2Q68DH5 695 aaPredicted RBP19.86■□□□□ 0.77
SREBF1-206ENST00000423161 TMEM150AQ86TG1 271 aa19.86■□□□□ 0.77
SREBF1-206ENST00000423161 CELF5Q8N6W0 485 aaKnown RBP19.86■□□□□ 0.77
SREBF1-206ENST00000423161 GLIS3Q8NEA6 775 aa19.86■□□□□ 0.77
SREBF1-206ENST00000423161 SECISBP2LQ93073 1101 aaKnown RBP19.86■□□□□ 0.77
SREBF1-206ENST00000423161 HPS3Q969F9 1004 aa19.86■□□□□ 0.77
SREBF1-206ENST00000423161 ANKRD36BP1Q96IX9 119 aa19.86■□□□□ 0.77
SREBF1-206ENST00000423161 ZNF396Q96N95 335 aaPredicted RBP19.86■□□□□ 0.77
SREBF1-206ENST00000423161 KBTBD4Q9NVX7 518 aa19.86■□□□□ 0.77
SREBF1-206ENST00000423161 THG1LQ9NWX6 298 aaKnown RBP19.86■□□□□ 0.77
SREBF1-206ENST00000423161 GDAP2Q9NXN4 497 aa19.86■□□□□ 0.77
SREBF1-206ENST00000423161 TFIP11Q9UBB9 837 aaKnown RBP19.86■□□□□ 0.77
SREBF1-206ENST00000423161 SIX4Q9UIU6 781 aa19.86■□□□□ 0.77
SREBF1-206ENST00000423161 MAGED2Q9UNF1 606 aaPredicted RBP19.86■□□□□ 0.77
SREBF1-206ENST00000423161 HELZP42694 1942 aaKnown RBP19.86■□□□□ 0.77
SREBF1-206ENST00000423161 PPP6R2O75170 966 aa19.85■□□□□ 0.77
SREBF1-206ENST00000423161 F11P03951 625 aa19.85■□□□□ 0.77
SREBF1-206ENST00000423161 AVPR1AP37288 418 aa19.85■□□□□ 0.77
SREBF1-206ENST00000423161 CXCL12P48061 93 aa19.85■□□□□ 0.77
SREBF1-206ENST00000423161 ASIC1P78348 528 aa19.85■□□□□ 0.77
SREBF1-206ENST00000423161 TNK2Q07912 1038 aa19.85■□□□□ 0.77
SREBF1-206ENST00000423161 PON2Q15165 354 aa19.85■□□□□ 0.77
SREBF1-206ENST00000423161 WDR44Q5JSH3 913 aa19.85■□□□□ 0.77
SREBF1-206ENST00000423161 SDHAF4Q5VUM1 108 aa19.85■□□□□ 0.77
SREBF1-206ENST00000423161 OSTM1Q86WC4 334 aa19.85■□□□□ 0.77
SREBF1-206ENST00000423161 ADGRF2Q8IZF7 708 aa19.85■□□□□ 0.77
SREBF1-206ENST00000423161 SPEM1Q8N4L4 309 aa19.85■□□□□ 0.77
SREBF1-206ENST00000423161 MAB21L3Q8N8X9 362 aa19.85■□□□□ 0.77
SREBF1-206ENST00000423161 SPATA18Q8TC71 538 aa19.85■□□□□ 0.77
SREBF1-206ENST00000423161 TRIM9Q9C026 710 aa19.85■□□□□ 0.77
SREBF1-206ENST00000423161 CUEDC2Q9H467 287 aa19.85■□□□□ 0.77
SREBF1-206ENST00000423161 ABCB6Q9NP58 842 aa19.85■□□□□ 0.77
SREBF1-206ENST00000423161 INTS13Q9NVM9 706 aa19.85■□□□□ 0.77
SREBF1-206ENST00000423161 R3HCC1Q9Y3T6 440 aaKnown RBP19.85■□□□□ 0.77
SREBF1-206ENST00000423161 PTPRJQ12913 1337 aa19.84■□□□□ 0.77
SREBF1-206ENST00000423161 ZNF233A6NK53 670 aa19.84■□□□□ 0.77
SREBF1-206ENST00000423161 CYP2F1P24903 491 aa19.84■□□□□ 0.77
SREBF1-206ENST00000423161 DDX6P26196 483 aaKnown RBP eCLIP19.84■□□□□ 0.77
SREBF1-206ENST00000423161 RPL10AP62906 217 aaKnown RBP19.84■□□□□ 0.77
SREBF1-206ENST00000423161 MYO1EQ12965 1108 aa19.84■□□□□ 0.77
SREBF1-206ENST00000423161 DDR2Q16832 855 aa19.84■□□□□ 0.77
SREBF1-206ENST00000423161 CCDC142Q17RM4 750 aa19.84■□□□□ 0.77
SREBF1-206ENST00000423161 ITPRIPL2Q3MIP1 535 aa19.84■□□□□ 0.77
SREBF1-206ENST00000423161 DGKKQ5KSL6 1271 aa19.84■□□□□ 0.77
SREBF1-206ENST00000423161 Q6ZS52 159 aa19.84■□□□□ 0.77
SREBF1-206ENST00000423161 TOP6BLQ8N6T0 577 aa19.84■□□□□ 0.77
SREBF1-206ENST00000423161 OR5B17Q8NGF7 314 aa19.84■□□□□ 0.77
SREBF1-206ENST00000423161 MRPS31Q92665 395 aaKnown RBP19.84■□□□□ 0.77
SREBF1-206ENST00000423161 DHX58Q96C10 678 aa19.84■□□□□ 0.77
SREBF1-206ENST00000423161 PKMYT1Q99640 499 aa19.84■□□□□ 0.77
SREBF1-206ENST00000423161 GTF3C4Q9UKN8 822 aa19.84■□□□□ 0.77
SREBF1-206ENST00000423161 CCL26Q9Y258 94 aa19.84■□□□□ 0.77
SREBF1-206ENST00000423161 EIF3DO15371 548 aaKnown RBP eCLIP19.83■□□□□ 0.77
SREBF1-206ENST00000423161 CUTAO60888 179 aa19.83■□□□□ 0.77
SREBF1-206ENST00000423161 YEATS4O95619 227 aa19.83■□□□□ 0.77
SREBF1-206ENST00000423161 TNNC2P02585 160 aa19.83■□□□□ 0.77
SREBF1-206ENST00000423161 PCSK1P29120 753 aa19.83■□□□□ 0.77
SREBF1-206ENST00000423161 LHX1P48742 406 aa19.83■□□□□ 0.77
SREBF1-206ENST00000423161 AMPD3Q01432 767 aa19.83■□□□□ 0.77
SREBF1-206ENST00000423161 SURF1Q15526 300 aa19.83■□□□□ 0.77
SREBF1-206ENST00000423161 TXNDC8Q6A555 127 aa19.83■□□□□ 0.77
SREBF1-206ENST00000423161 CBWD2Q8IUF1 395 aa19.83■□□□□ 0.77
SREBF1-206ENST00000423161 SPATA2LQ8IUW3 424 aaPredicted RBP19.83■□□□□ 0.77
SREBF1-206ENST00000423161 USP13Q92995 863 aaPredicted RBP19.83■□□□□ 0.77
SREBF1-206ENST00000423161 KIF9Q9HAQ2 790 aa19.83■□□□□ 0.77
SREBF1-206ENST00000423161 GKN1Q9NS71 199 aa19.83■□□□□ 0.77
SREBF1-206ENST00000423161 HSPBP1Q9NZL4 362 aa19.83■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms