RNA–Protein interactions for RNA: ENST00000421378.2

LINC00271-201, long intergenic non-protein coding RNA 271, humanhuman

TSL 1 (best) BASIC

Gene LINC00271, Length 1,580 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00271-201ENST00000421378 CRYBG2Q8N1P7 616 aa18.68■□□□□ 0.58
LINC00271-201ENST00000421378 RBBP8NLQ8NC74 664 aaPredicted RBP18.68■□□□□ 0.58
LINC00271-201ENST00000421378 ZNF461Q8TAF7 563 aa18.68■□□□□ 0.58
LINC00271-201ENST00000421378 IQCDQ96DY2 449 aa18.68■□□□□ 0.58
LINC00271-201ENST00000421378 CDX2Q99626 313 aaPredicted RBP18.68■□□□□ 0.58
LINC00271-201ENST00000421378 PKMYT1Q99640 499 aa18.68■□□□□ 0.58
LINC00271-201ENST00000421378 TTYH3Q9C0H2 523 aa18.68■□□□□ 0.58
LINC00271-201ENST00000421378 GPR88Q9GZN0 384 aa18.68■□□□□ 0.58
LINC00271-201ENST00000421378 CRTAC1Q9NQ79 661 aa18.68■□□□□ 0.58
LINC00271-201ENST00000421378 REV3LO60673 3130 aa18.67■□□□□ 0.58
LINC00271-201ENST00000421378 GLUD1P00367 558 aa18.67■□□□□ 0.58
LINC00271-201ENST00000421378 PNMA6AP0CW24 399 aaPredicted RBP18.67■□□□□ 0.58
LINC00271-201ENST00000421378 CLCN4P51793 760 aa18.67■□□□□ 0.58
LINC00271-201ENST00000421378 ZNF132P52740 706 aa18.67■□□□□ 0.58
LINC00271-201ENST00000421378 JAM2P57087 298 aa18.67■□□□□ 0.58
LINC00271-201ENST00000421378 SMARCB1Q12824 385 aa18.67■□□□□ 0.58
LINC00271-201ENST00000421378 NFE2Q16621 373 aaPredicted RBP18.67■□□□□ 0.58
LINC00271-201ENST00000421378 DUSP6Q16828 381 aa18.67■□□□□ 0.58
LINC00271-201ENST00000421378 CCDC142Q17RM4 750 aa18.67■□□□□ 0.58
LINC00271-201ENST00000421378 TCEAL5Q5H9L2 206 aa18.67■□□□□ 0.58
LINC00271-201ENST00000421378 MDH1BQ5I0G3 518 aa18.67■□□□□ 0.58
LINC00271-201ENST00000421378 TPGS2Q68CL5 300 aa18.67■□□□□ 0.58
LINC00271-201ENST00000421378 SMYD5Q6GMV2 418 aa18.67■□□□□ 0.58
LINC00271-201ENST00000421378 FAM171BQ6P995 826 aa18.67■□□□□ 0.58
LINC00271-201ENST00000421378 SLC4A11Q8NBS3 891 aa18.67■□□□□ 0.58
LINC00271-201ENST00000421378 MYCBPAPQ8TBZ2 947 aa18.67■□□□□ 0.58
LINC00271-201ENST00000421378 MYLIPQ8WY64 445 aa18.67■□□□□ 0.58
LINC00271-201ENST00000421378 GUCD1Q96NT3 240 aa18.67■□□□□ 0.58
LINC00271-201ENST00000421378 PGLYRP2Q96PD5 576 aa18.67■□□□□ 0.58
LINC00271-201ENST00000421378 CDCA3Q99618 268 aaPredicted RBP18.67■□□□□ 0.58
LINC00271-201ENST00000421378 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP18.67■□□□□ 0.58
LINC00271-201ENST00000421378 PRRC2BQ5JSZ5 2229 aaKnown RBP18.67■□□□□ 0.58
LINC00271-201ENST00000421378 FOXN3O00409 490 aaPredicted RBP18.66■□□□□ 0.58
LINC00271-201ENST00000421378 TGM5O43548 720 aa18.66■□□□□ 0.58
LINC00271-201ENST00000421378 CLASP2O75122 1294 aaKnown RBP18.66■□□□□ 0.58
LINC00271-201ENST00000421378 ABLIM3O94929 683 aa18.66■□□□□ 0.58
LINC00271-201ENST00000421378 PAEPP09466 180 aa18.66■□□□□ 0.58
LINC00271-201ENST00000421378 RNF19BQ6ZMZ0 732 aa18.66■□□□□ 0.58
LINC00271-201ENST00000421378 FAM71AQ8IYT1 594 aa18.66■□□□□ 0.58
LINC00271-201ENST00000421378 C12orf29Q8N999 325 aa18.66■□□□□ 0.58
LINC00271-201ENST00000421378 PCED1BQ96HM7 432 aa18.66■□□□□ 0.58
LINC00271-201ENST00000421378 HEXIM2Q96MH2 286 aaKnown RBP18.66■□□□□ 0.58
LINC00271-201ENST00000421378 FAM49BQ9NUQ9 324 aa18.66■□□□□ 0.58
LINC00271-201ENST00000421378 TMLHEQ9NVH6 421 aa18.66■□□□□ 0.58
LINC00271-201ENST00000421378 MTMR11A4FU01 709 aa18.65■□□□□ 0.58
LINC00271-201ENST00000421378 RNF225M0QZC1 329 aaPredicted RBP18.65■□□□□ 0.58
LINC00271-201ENST00000421378 GYPCP04921 128 aa18.65■□□□□ 0.58
LINC00271-201ENST00000421378 ATF2P15336 505 aa18.65■□□□□ 0.58
LINC00271-201ENST00000421378 CDR1P51861 262 aa18.65■□□□□ 0.58
LINC00271-201ENST00000421378 CYP27A1Q02318 531 aa18.65■□□□□ 0.58
LINC00271-201ENST00000421378 ADCY1Q08828 1119 aa18.65■□□□□ 0.58
LINC00271-201ENST00000421378 TRIM14Q14142 442 aa18.65■□□□□ 0.58
LINC00271-201ENST00000421378 C4orf50Q6ZRC1 276 aa18.65■□□□□ 0.58
LINC00271-201ENST00000421378 C2orf15Q8WU43 125 aaKnown RBP18.65■□□□□ 0.58
LINC00271-201ENST00000421378 MYLPFQ96A32 169 aa18.65■□□□□ 0.58
LINC00271-201ENST00000421378 LPIN3Q9BQK8 851 aa18.65■□□□□ 0.58
LINC00271-201ENST00000421378 EDEM3Q9BZQ6 932 aa18.65■□□□□ 0.58
LINC00271-201ENST00000421378 MTMR10Q9NXD2 777 aa18.65■□□□□ 0.58
LINC00271-201ENST00000421378 ABI2Q9NYB9 513 aaPredicted RBP18.65■□□□□ 0.58
LINC00271-201ENST00000421378 AFF4Q9UHB7 1163 aaKnown RBP18.65■□□□□ 0.58
LINC00271-201ENST00000421378 HCFC2Q9Y5Z7 792 aa18.65■□□□□ 0.58
LINC00271-201ENST00000421378 PLXNA3P51805 1871 aa18.65■□□□□ 0.58
LINC00271-201ENST00000421378 A0A1W2PQJ5 194 aa18.64■□□□□ 0.58
LINC00271-201ENST00000421378 CYP26A1O43174 497 aa18.64■□□□□ 0.58
LINC00271-201ENST00000421378 ADCY5O95622 1261 aa18.64■□□□□ 0.58
LINC00271-201ENST00000421378 C1RP00736 705 aa18.64■□□□□ 0.58
LINC00271-201ENST00000421378 CD19P15391 556 aa18.64■□□□□ 0.58
LINC00271-201ENST00000421378 FOSL2P15408 326 aa18.64■□□□□ 0.58
LINC00271-201ENST00000421378 SOX5P35711 763 aa18.64■□□□□ 0.58
LINC00271-201ENST00000421378 STAT1P42224 750 aa18.64■□□□□ 0.58
LINC00271-201ENST00000421378 GSE1Q14687 1217 aa18.64■□□□□ 0.58
LINC00271-201ENST00000421378 SPATA2LQ8IUW3 424 aaPredicted RBP18.64■□□□□ 0.58
LINC00271-201ENST00000421378 MICALL1Q8N3F8 863 aa18.64■□□□□ 0.58
LINC00271-201ENST00000421378 ATAD1Q8NBU5 361 aa18.64■□□□□ 0.58
LINC00271-201ENST00000421378 BAP1Q92560 729 aa18.64■□□□□ 0.58
LINC00271-201ENST00000421378 MYO6Q9UM54 1294 aa18.64■□□□□ 0.58
LINC00271-201ENST00000421378 PCDHB5Q9Y5E4 795 aa18.64■□□□□ 0.58
LINC00271-201ENST00000421378 CCDC130P13994 396 aa18.64■□□□□ 0.57
LINC00271-201ENST00000421378 GTF2F1P35269 517 aaKnown RBP eCLIP18.64■□□□□ 0.57
LINC00271-201ENST00000421378 PTK2Q05397 1052 aa18.64■□□□□ 0.57
LINC00271-201ENST00000421378 HYAL1Q12794 435 aa18.64■□□□□ 0.57
LINC00271-201ENST00000421378 CFAP221Q4G0U5 840 aa18.64■□□□□ 0.57
LINC00271-201ENST00000421378 SGO2Q562F6 1265 aa18.64■□□□□ 0.57
LINC00271-201ENST00000421378 LILRA6Q6PI73 481 aa18.64■□□□□ 0.57
LINC00271-201ENST00000421378 TMC6Q7Z403 805 aa18.64■□□□□ 0.57
LINC00271-201ENST00000421378 ZNF397Q8NF99 534 aaPredicted RBP18.64■□□□□ 0.57
LINC00271-201ENST00000421378 SPPL2BQ8TCT7 592 aa18.64■□□□□ 0.57
LINC00271-201ENST00000421378 SLC2A14Q8TDB8 520 aa18.64■□□□□ 0.57
LINC00271-201ENST00000421378 FUBP3Q96I24 572 aaKnown RBP eCLIP18.64■□□□□ 0.57
LINC00271-201ENST00000421378 IGFLR1Q9H665 355 aa18.64■□□□□ 0.57
LINC00271-201ENST00000421378 ABCB6Q9NP58 842 aa18.64■□□□□ 0.57
LINC00271-201ENST00000421378 FBXW11Q9UKB1 542 aa18.64■□□□□ 0.57
LINC00271-201ENST00000421378 KIAA1257Q9ULG3 409 aa18.64■□□□□ 0.57
LINC00271-201ENST00000421378 MAFFQ9ULX9 164 aa18.64■□□□□ 0.57
LINC00271-201ENST00000421378 CAPN11Q9UMQ6 739 aa18.64■□□□□ 0.57
LINC00271-201ENST00000421378 LRRC53A6NM62 1247 aa18.63■□□□□ 0.57
LINC00271-201ENST00000421378 GFPT2O94808 682 aa18.63■□□□□ 0.57
LINC00271-201ENST00000421378 VNN2O95498 520 aa18.63■□□□□ 0.57
LINC00271-201ENST00000421378 TPM1P09493 284 aa18.63■□□□□ 0.57
LINC00271-201ENST00000421378 SPATA31D3P0C874 917 aa18.63■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms