RNA–Protein interactions for RNA: ENST00000418258.5

PTCH1-205, Transcript of patched 1, humanhuman

TSL 5 BASIC

Gene PTCH1, Length 7,815 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-205ENST00000418258 OSGEPL1Q9H4B0 414 aa11.68□□□□□ -0.54
PTCH1-205ENST00000418258 CHST12Q9NRB3 414 aa11.68□□□□□ -0.54
PTCH1-205ENST00000418258 PAK5Q9P286 719 aa11.68□□□□□ -0.54
PTCH1-205ENST00000418258 ENDOD1O94919 500 aa11.68□□□□□ -0.54
PTCH1-205ENST00000418258 PTPN7P35236 360 aa11.68□□□□□ -0.54
PTCH1-205ENST00000418258 NEK2P51955 445 aa11.68□□□□□ -0.54
PTCH1-205ENST00000418258 STX3Q13277 289 aa11.68□□□□□ -0.54
PTCH1-205ENST00000418258 FBXO38Q6PIJ6 1188 aa11.68□□□□□ -0.54
PTCH1-205ENST00000418258 TRAPPC11Q7Z392 1133 aa11.68□□□□□ -0.54
PTCH1-205ENST00000418258 MIB1Q86YT6 1006 aa11.68□□□□□ -0.54
PTCH1-205ENST00000418258 ZNF614Q8N883 585 aa11.68□□□□□ -0.54
PTCH1-205ENST00000418258 DDI1Q8WTU0 396 aa11.68□□□□□ -0.54
PTCH1-205ENST00000418258 GRAMD1AQ96CP6 724 aa11.68□□□□□ -0.54
PTCH1-205ENST00000418258 ATG4CQ96DT6 458 aa11.68□□□□□ -0.54
PTCH1-205ENST00000418258 RBM15Q96T37 977 aaKnown RBP eCLIP11.68□□□□□ -0.54
PTCH1-205ENST00000418258 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP11.68□□□□□ -0.54
PTCH1-205ENST00000418258 HOXA2O43364 376 aa11.67□□□□□ -0.54
PTCH1-205ENST00000418258 PQBP1O60828 265 aaKnown RBP11.67□□□□□ -0.54
PTCH1-205ENST00000418258 GRK3P35626 688 aa11.67□□□□□ -0.54
PTCH1-205ENST00000418258 RPS6P62753 249 aaKnown RBP11.67□□□□□ -0.54
PTCH1-205ENST00000418258 LRRC23Q53EV4 343 aaPredicted RBP11.67□□□□□ -0.54
PTCH1-205ENST00000418258 PLD3Q8IV08 490 aa11.67□□□□□ -0.54
PTCH1-205ENST00000418258 PCSK9Q8NBP7 692 aaKnown RBP11.67□□□□□ -0.54
PTCH1-205ENST00000418258 C1orf131Q8NDD1 294 aaKnown RBP11.67□□□□□ -0.54
PTCH1-205ENST00000418258 RSAD1Q9HA92 442 aa11.67□□□□□ -0.54
PTCH1-205ENST00000418258 RRAGCQ9HB90 399 aa11.67□□□□□ -0.54
PTCH1-205ENST00000418258 A0A1W2PQC6 194 aa11.67□□□□□ -0.54
PTCH1-205ENST00000418258 PCDH8O95206 1070 aa11.67□□□□□ -0.54
PTCH1-205ENST00000418258 APOA1P02647 267 aa11.67□□□□□ -0.54
PTCH1-205ENST00000418258 ERFP50548 548 aa11.67□□□□□ -0.54
PTCH1-205ENST00000418258 AMPD2Q01433 879 aa11.67□□□□□ -0.54
PTCH1-205ENST00000418258 FAM118BQ9BPY3 351 aa11.67□□□□□ -0.54
PTCH1-205ENST00000418258 TARS2Q9BW92 718 aaKnown RBP11.67□□□□□ -0.54
PTCH1-205ENST00000418258 ZNF229Q9UJW7 825 aa11.67□□□□□ -0.54
PTCH1-205ENST00000418258 GAS2O43903 313 aaKnown RBP11.67□□□□□ -0.54
PTCH1-205ENST00000418258 CYTH1Q15438 398 aa11.67□□□□□ -0.54
PTCH1-205ENST00000418258 CIPCQ9C0C6 399 aa11.67□□□□□ -0.54
PTCH1-205ENST00000418258 NYAP2Q9P242 653 aa11.67□□□□□ -0.54
PTCH1-205ENST00000418258 RNF112Q9ULX5 631 aa11.67□□□□□ -0.54
PTCH1-205ENST00000418258 CHMP2BQ9UQN3 213 aa11.67□□□□□ -0.54
PTCH1-205ENST00000418258 VPS9D1Q9Y2B5 631 aa11.67□□□□□ -0.54
PTCH1-205ENST00000418258 PLA2R1Q13018 1463 aa11.67□□□□□ -0.54
PTCH1-205ENST00000418258 ZNF185O15231 689 aa11.67□□□□□ -0.54
PTCH1-205ENST00000418258 FOXN1O15353 648 aa11.67□□□□□ -0.54
PTCH1-205ENST00000418258 MTSS1O43312 755 aa11.67□□□□□ -0.54
PTCH1-205ENST00000418258 PSMA3P25788 255 aa11.67□□□□□ -0.54
PTCH1-205ENST00000418258 SERPINB9P50453 376 aa11.67□□□□□ -0.54
PTCH1-205ENST00000418258 KPNA1P52294 538 aaPredicted RBP11.67□□□□□ -0.54
PTCH1-205ENST00000418258 MTM1Q13496 603 aa11.67□□□□□ -0.54
PTCH1-205ENST00000418258 PWP1Q13610 501 aa11.67□□□□□ -0.54
PTCH1-205ENST00000418258 SLC18A3Q16572 532 aa11.67□□□□□ -0.54
PTCH1-205ENST00000418258 IRAK1BP1Q5VVH5 260 aa11.67□□□□□ -0.54
PTCH1-205ENST00000418258 PRUNE1Q86TP1 453 aa11.67□□□□□ -0.54
PTCH1-205ENST00000418258 C7orf25Q9BPX7 421 aa11.67□□□□□ -0.54
PTCH1-205ENST00000418258 CCDC3Q9BQI4 270 aa11.67□□□□□ -0.54
PTCH1-205ENST00000418258 KRCC1Q9NPI7 259 aaPredicted RBP11.67□□□□□ -0.54
PTCH1-205ENST00000418258 PCDHB2Q9Y5E7 798 aa11.67□□□□□ -0.54
PTCH1-205ENST00000418258 TBX3O15119 743 aa11.67□□□□□ -0.54
PTCH1-205ENST00000418258 STX7O15400 261 aaKnown RBP11.67□□□□□ -0.54
PTCH1-205ENST00000418258 RASSF9O75901 435 aa11.67□□□□□ -0.54
PTCH1-205ENST00000418258 CNTN1Q12860 1018 aa11.67□□□□□ -0.54
PTCH1-205ENST00000418258 PTK7Q13308 1070 aa11.67□□□□□ -0.54
PTCH1-205ENST00000418258 TRIM60Q495X7 471 aa11.67□□□□□ -0.54
PTCH1-205ENST00000418258 WNK4Q96J92 1243 aa11.67□□□□□ -0.54
PTCH1-205ENST00000418258 SPATA31A1Q5TZJ5 1347 aa11.67□□□□□ -0.54
PTCH1-205ENST00000418258 HNRNPRO43390 633 aaKnown RBP11.67□□□□□ -0.54
PTCH1-205ENST00000418258 SLC26A4O43511 780 aa11.67□□□□□ -0.54
PTCH1-205ENST00000418258 UCHL3P15374 230 aa11.67□□□□□ -0.54
PTCH1-205ENST00000418258 PTGER2P43116 358 aa11.67□□□□□ -0.54
PTCH1-205ENST00000418258 PRIM2P49643 509 aa11.67□□□□□ -0.54
PTCH1-205ENST00000418258 TBL3Q12788 808 aaKnown RBP11.67□□□□□ -0.54
PTCH1-205ENST00000418258 CDR2LQ86X02 465 aaPredicted RBP11.67□□□□□ -0.54
PTCH1-205ENST00000418258 TUBE1Q9UJT0 475 aa11.67□□□□□ -0.54
PTCH1-205ENST00000418258 V9GYQ6 96 aa11.67□□□□□ -0.54
PTCH1-205ENST00000418258 CYB561D2O14569 222 aa11.66□□□□□ -0.54
PTCH1-205ENST00000418258 TCN1P20061 433 aaPredicted RBP11.66□□□□□ -0.54
PTCH1-205ENST00000418258 AVPR1AP37288 418 aa11.66□□□□□ -0.54
PTCH1-205ENST00000418258 PDIA6Q15084 440 aa11.66□□□□□ -0.54
PTCH1-205ENST00000418258 HERC6Q8IVU3 1022 aa11.66□□□□□ -0.54
PTCH1-205ENST00000418258 CCSER1Q9C0I3 900 aa11.66□□□□□ -0.54
PTCH1-205ENST00000418258 ADGRB3O60242 1522 aa11.66□□□□□ -0.54
PTCH1-205ENST00000418258 VWA5AO00534 786 aa11.66□□□□□ -0.54
PTCH1-205ENST00000418258 ATMINO43313 823 aaPredicted RBP11.66□□□□□ -0.54
PTCH1-205ENST00000418258 MAPK9P45984 424 aa11.66□□□□□ -0.54
PTCH1-205ENST00000418258 GALCP54803 685 aa11.66□□□□□ -0.54
PTCH1-205ENST00000418258 IYDQ6PHW0 289 aa11.66□□□□□ -0.54
PTCH1-205ENST00000418258 INPP5DQ92835 1189 aa11.66□□□□□ -0.54
PTCH1-205ENST00000418258 NIF3L1Q9GZT8 377 aa11.66□□□□□ -0.54
PTCH1-205ENST00000418258 PSMC3IPQ9P2W1 217 aaPredicted RBP11.66□□□□□ -0.54
PTCH1-205ENST00000418258 TBX20Q9UMR3 447 aa11.66□□□□□ -0.54
PTCH1-205ENST00000418258 RAG1P15918 1043 aa11.66□□□□□ -0.54
PTCH1-205ENST00000418258 LONRF1Q17RB8 773 aa11.66□□□□□ -0.54
PTCH1-205ENST00000418258 C16orf89Q6UX73 402 aa11.66□□□□□ -0.54
PTCH1-205ENST00000418258 KIRREL3Q8IZU9 778 aa11.66□□□□□ -0.54
PTCH1-205ENST00000418258 EMILIN2Q9BXX0 1053 aa11.66□□□□□ -0.54
PTCH1-205ENST00000418258 MYO1CO00159 1063 aa11.66□□□□□ -0.54
PTCH1-205ENST00000418258 ANXA9O76027 345 aa11.66□□□□□ -0.54
PTCH1-205ENST00000418258 THP07101 528 aa11.66□□□□□ -0.54
PTCH1-205ENST00000418258 NAPEPLDQ6IQ20 393 aa11.66□□□□□ -0.54
PTCH1-205ENST00000418258 ADCK1Q86TW2 530 aa11.66□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms