RNA–Protein interactions for RNA: ENST00000418107.2

HLA-DMB-258, Transcript of major histocompatibility complex, class II, DM beta, humanhuman

APPRIS P1 BASIC

Gene HLA-DMB, Length 1,397 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DMB-258ENST00000418107 MTHFRP42898 656 aa14.07□□□□□ -0.16
HLA-DMB-258ENST00000418107 VAV2P52735 878 aa14.07□□□□□ -0.16
HLA-DMB-258ENST00000418107 BCAR1P56945 870 aa14.07□□□□□ -0.16
HLA-DMB-258ENST00000418107 MYL6P60660 151 aa14.07□□□□□ -0.16
HLA-DMB-258ENST00000418107 GNG11P61952 73 aa14.07□□□□□ -0.16
HLA-DMB-258ENST00000418107 NOP14P78316 857 aaKnown RBP14.07□□□□□ -0.16
HLA-DMB-258ENST00000418107 GCNT1Q02742 428 aa14.07□□□□□ -0.16
HLA-DMB-258ENST00000418107 GFPT1Q06210 699 aaPredicted RBP14.07□□□□□ -0.16
HLA-DMB-258ENST00000418107 KIF5AQ12840 1032 aa14.07□□□□□ -0.16
HLA-DMB-258ENST00000418107 SGSM1Q2NKQ1 1148 aa14.07□□□□□ -0.16
HLA-DMB-258ENST00000418107 ZNF699Q32M78 642 aa14.07□□□□□ -0.16
HLA-DMB-258ENST00000418107 CCDC122Q5T0U0 273 aa14.07□□□□□ -0.16
HLA-DMB-258ENST00000418107 SPOPLQ6IQ16 392 aa14.07□□□□□ -0.16
HLA-DMB-258ENST00000418107 NYAP1Q6ZVC0 841 aa14.07□□□□□ -0.16
HLA-DMB-258ENST00000418107 ZNF571Q7Z3V5 609 aaPredicted RBP14.07□□□□□ -0.16
HLA-DMB-258ENST00000418107 ZNF598Q86UK7 904 aaKnown RBP14.07□□□□□ -0.16
HLA-DMB-258ENST00000418107 EFCAB13Q8IY85 973 aa14.07□□□□□ -0.16
HLA-DMB-258ENST00000418107 HACE1Q8IYU2 909 aa14.07□□□□□ -0.16
HLA-DMB-258ENST00000418107 AUTS2Q8WXX7 1259 aa14.07□□□□□ -0.16
HLA-DMB-258ENST00000418107 TSGA10Q9BZW7 698 aa14.07□□□□□ -0.16
HLA-DMB-258ENST00000418107 ADAMTS1Q9UHI8 967 aa14.07□□□□□ -0.16
HLA-DMB-258ENST00000418107 GUCA1BQ9UMX6 200 aa14.07□□□□□ -0.16
HLA-DMB-258ENST00000418107 VPS13AQ96RL7 3174 aa14.06□□□□□ -0.16
HLA-DMB-258ENST00000418107 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP14.06□□□□□ -0.16
HLA-DMB-258ENST00000418107 CYP26A1O43174 497 aa14.06□□□□□ -0.16
HLA-DMB-258ENST00000418107 EOMESO95936 686 aa14.06□□□□□ -0.16
HLA-DMB-258ENST00000418107 EPCAMP16422 314 aa14.06□□□□□ -0.16
HLA-DMB-258ENST00000418107 ALDH7A1P49419 539 aaKnown RBP14.06□□□□□ -0.16
HLA-DMB-258ENST00000418107 CUL2Q13617 745 aa14.06□□□□□ -0.16
HLA-DMB-258ENST00000418107 SLC18A3Q16572 532 aa14.06□□□□□ -0.16
HLA-DMB-258ENST00000418107 SYT10Q6XYQ8 523 aa14.06□□□□□ -0.16
HLA-DMB-258ENST00000418107 TMEM173Q86WV6 379 aaPredicted RBP14.06□□□□□ -0.16
HLA-DMB-258ENST00000418107 NT5DC4Q86YG4 428 aa14.06□□□□□ -0.16
HLA-DMB-258ENST00000418107 FAM71AQ8IYT1 594 aa14.06□□□□□ -0.16
HLA-DMB-258ENST00000418107 VPS52Q8N1B4 723 aa14.06□□□□□ -0.16
HLA-DMB-258ENST00000418107 TDRD5Q8NAT2 981 aaKnown RBP14.06□□□□□ -0.16
HLA-DMB-258ENST00000418107 KIF18AQ8NI77 898 aa14.06□□□□□ -0.16
HLA-DMB-258ENST00000418107 FEZF2Q8TBJ5 459 aa14.06□□□□□ -0.16
HLA-DMB-258ENST00000418107 SHC3Q92529 594 aa14.06□□□□□ -0.16
HLA-DMB-258ENST00000418107 TMEM169Q96HH4 297 aa14.06□□□□□ -0.16
HLA-DMB-258ENST00000418107 MRPL9Q9BYD2 267 aaKnown RBP14.06□□□□□ -0.16
HLA-DMB-258ENST00000418107 GPR88Q9GZN0 384 aa14.06□□□□□ -0.16
HLA-DMB-258ENST00000418107 ZBP1Q9H171 429 aa14.06□□□□□ -0.16
HLA-DMB-258ENST00000418107 NXF3Q9H4D5 531 aaKnown RBP14.06□□□□□ -0.16
HLA-DMB-258ENST00000418107 PLEKHA5Q9HAU0 1116 aa14.06□□□□□ -0.16
HLA-DMB-258ENST00000418107 LIMD1Q9UGP4 676 aa14.06□□□□□ -0.16
HLA-DMB-258ENST00000418107 REXO2Q9Y3B8 237 aaKnown RBP14.06□□□□□ -0.16
HLA-DMB-258ENST00000418107 PCDHB4Q9Y5E5 795 aa14.06□□□□□ -0.16
HLA-DMB-258ENST00000418107 PDCD11Q14690 1871 aaKnown RBP14.05□□□□□ -0.16
HLA-DMB-258ENST00000418107 PRR23AA6NEV1 266 aa14.05□□□□□ -0.16
HLA-DMB-258ENST00000418107 RECQL4O94761 1208 aa14.05□□□□□ -0.16
HLA-DMB-258ENST00000418107 LCA5LO95447 670 aa14.05□□□□□ -0.16
HLA-DMB-258ENST00000418107 CST3P01034 146 aaPredicted RBP14.05□□□□□ -0.16
HLA-DMB-258ENST00000418107 ITGB3P05106 788 aa14.05□□□□□ -0.16
HLA-DMB-258ENST00000418107 CASQ1P31415 396 aa14.05□□□□□ -0.16
HLA-DMB-258ENST00000418107 NBL1P41271 181 aa14.05□□□□□ -0.16
HLA-DMB-258ENST00000418107 BPIFB4P59827 614 aa14.05□□□□□ -0.16
HLA-DMB-258ENST00000418107 YWHAEP62258 255 aaKnown RBP14.05□□□□□ -0.16
HLA-DMB-258ENST00000418107 ETF1P62495 437 aaKnown RBP14.05□□□□□ -0.16
HLA-DMB-258ENST00000418107 BMS1Q14692 1282 aaKnown RBP14.05□□□□□ -0.16
HLA-DMB-258ENST00000418107 ASTE1Q2TB18 679 aaPredicted RBP14.05□□□□□ -0.16
HLA-DMB-258ENST00000418107 ZNF667Q5HYK9 610 aa14.05□□□□□ -0.16
HLA-DMB-258ENST00000418107 C10orf76Q5T2E6 689 aa14.05□□□□□ -0.16
HLA-DMB-258ENST00000418107 ASTLQ6HA08 431 aaPredicted RBP14.05□□□□□ -0.16
HLA-DMB-258ENST00000418107 KIAA1841Q6NSI8 718 aa14.05□□□□□ -0.16
HLA-DMB-258ENST00000418107 ZDHHC14Q8IZN3 488 aa14.05□□□□□ -0.16
HLA-DMB-258ENST00000418107 BEST2Q8NFU1 509 aa14.05□□□□□ -0.16
HLA-DMB-258ENST00000418107 TAF4BQ92750 862 aa14.05□□□□□ -0.16
HLA-DMB-258ENST00000418107 AGPAT1Q99943 283 aa14.05□□□□□ -0.16
HLA-DMB-258ENST00000418107 MFSD1Q9H3U5 465 aa14.05□□□□□ -0.16
HLA-DMB-258ENST00000418107 CHST12Q9NRB3 414 aa14.05□□□□□ -0.16
HLA-DMB-258ENST00000418107 DZANK1Q9NVP4 752 aa14.05□□□□□ -0.16
HLA-DMB-258ENST00000418107 DPP3Q9NY33 737 aa14.05□□□□□ -0.16
HLA-DMB-258ENST00000418107 DNAI1Q9UI46 699 aa14.05□□□□□ -0.16
HLA-DMB-258ENST00000418107 C2CD2Q9Y426 696 aa14.05□□□□□ -0.16
HLA-DMB-258ENST00000418107 HES2Q9Y543 173 aa14.05□□□□□ -0.16
HLA-DMB-258ENST00000418107 NUB1Q9Y5A7 615 aa14.05□□□□□ -0.16
HLA-DMB-258ENST00000418107 FAM186AA6NE01 2351 aa14.05□□□□□ -0.16
HLA-DMB-258ENST00000418107 A0A087X0T9 212 aa14.04□□□□□ -0.16
HLA-DMB-258ENST00000418107 A0A0U1RQJ8 604 aa14.04□□□□□ -0.16
HLA-DMB-258ENST00000418107 ZNF263O14978 683 aa14.04□□□□□ -0.16
HLA-DMB-258ENST00000418107 XPOTO43592 962 aaKnown RBP14.04□□□□□ -0.16
HLA-DMB-258ENST00000418107 ASS1P00966 412 aaKnown RBP14.04□□□□□ -0.16
HLA-DMB-258ENST00000418107 FAM228BP0C875 321 aa14.04□□□□□ -0.16
HLA-DMB-258ENST00000418107 P4HA1P13674 534 aa14.04□□□□□ -0.16
HLA-DMB-258ENST00000418107 AKAP5P24588 427 aa14.04□□□□□ -0.16
HLA-DMB-258ENST00000418107 PDE6CP51160 858 aa14.04□□□□□ -0.16
HLA-DMB-258ENST00000418107 NAP1L1P55209 391 aaKnown RBP14.04□□□□□ -0.16
HLA-DMB-258ENST00000418107 RBP5P82980 135 aa14.04□□□□□ -0.16
HLA-DMB-258ENST00000418107 ZNF569Q5MCW4 686 aa14.04□□□□□ -0.16
HLA-DMB-258ENST00000418107 ATAT1Q5SQI0 421 aa14.04□□□□□ -0.16
HLA-DMB-258ENST00000418107 TAF3Q5VWG9 929 aa14.04□□□□□ -0.16
HLA-DMB-258ENST00000418107 ALKBH5Q6P6C2 394 aaKnown RBP14.04□□□□□ -0.16
HLA-DMB-258ENST00000418107 BCL7CQ8WUZ0 217 aaPredicted RBP14.04□□□□□ -0.16
HLA-DMB-258ENST00000418107 ATRIPQ8WXE1 791 aa14.04□□□□□ -0.16
HLA-DMB-258ENST00000418107 LPPQ93052 612 aa14.04□□□□□ -0.16
HLA-DMB-258ENST00000418107 NIF3L1Q9GZT8 377 aa14.04□□□□□ -0.16
HLA-DMB-258ENST00000418107 PDCL3Q9H2J4 239 aa14.04□□□□□ -0.16
HLA-DMB-258ENST00000418107 APOBEC3GQ9HC16 384 aaKnown RBP14.04□□□□□ -0.16
HLA-DMB-258ENST00000418107 KLK14Q9P0G3 267 aa14.04□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms