RNA–Protein interactions for RNA: ENST00000417540.5

HDLBP-206, Transcript of high density lipoprotein binding protein, humanhuman

TSL 4

Gene HDLBP, Length 525 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-206ENST00000417540 ZNF518BQ9C0D4 1074 aa10.96□□□□□ -0.65
HDLBP-206ENST00000417540 NXF1Q9UBU9 619 aaKnown RBP10.96□□□□□ -0.65
HDLBP-206ENST00000417540 GTF3C4Q9UKN8 822 aa10.96□□□□□ -0.65
HDLBP-206ENST00000417540 DSEQ9UL01 958 aa10.96□□□□□ -0.65
HDLBP-206ENST00000417540 TRAF3IP3Q9Y228 551 aa10.96□□□□□ -0.65
HDLBP-206ENST00000417540 PCDHA5Q9Y5H7 936 aa10.96□□□□□ -0.65
HDLBP-206ENST00000417540 DCHS1Q96JQ0 3298 aa10.95□□□□□ -0.66
HDLBP-206ENST00000417540 SHISA7A6NL88 538 aa10.95□□□□□ -0.66
HDLBP-206ENST00000417540 PDXKO00764 312 aa10.95□□□□□ -0.66
HDLBP-206ENST00000417540 PI15O43692 258 aa10.95□□□□□ -0.66
HDLBP-206ENST00000417540 HUS1O60921 280 aa10.95□□□□□ -0.66
HDLBP-206ENST00000417540 HLA-DRAP01903 254 aa10.95□□□□□ -0.66
HDLBP-206ENST00000417540 C4BPAP04003 597 aaKnown RBP10.95□□□□□ -0.66
HDLBP-206ENST00000417540 MYL1P05976 194 aa10.95□□□□□ -0.66
HDLBP-206ENST00000417540 PDGFRBP09619 1106 aa10.95□□□□□ -0.66
HDLBP-206ENST00000417540 SRFP11831 508 aa10.95□□□□□ -0.66
HDLBP-206ENST00000417540 WARSP23381 471 aaKnown RBP10.95□□□□□ -0.66
HDLBP-206ENST00000417540 GABRR2P28476 465 aa10.95□□□□□ -0.66
HDLBP-206ENST00000417540 ASPAP45381 313 aa10.95□□□□□ -0.66
HDLBP-206ENST00000417540 GCLMP48507 274 aa10.95□□□□□ -0.66
HDLBP-206ENST00000417540 USP46P62068 366 aa10.95□□□□□ -0.66
HDLBP-206ENST00000417540 TSPY1Q01534 308 aa10.95□□□□□ -0.66
HDLBP-206ENST00000417540 NCOA4Q13772 614 aa10.95□□□□□ -0.66
HDLBP-206ENST00000417540 DDR2Q16832 855 aa10.95□□□□□ -0.66
HDLBP-206ENST00000417540 DUOXA2Q1HG44 320 aa10.95□□□□□ -0.66
HDLBP-206ENST00000417540 FAM186BQ8IYM0 893 aa10.95□□□□□ -0.66
HDLBP-206ENST00000417540 PLCD3Q8N3E9 789 aa10.95□□□□□ -0.66
HDLBP-206ENST00000417540 SLC44A3Q8N4M1 653 aa10.95□□□□□ -0.66
HDLBP-206ENST00000417540 FBXL6Q8N531 539 aa10.95□□□□□ -0.66
HDLBP-206ENST00000417540 FLCNQ8NFG4 579 aa10.95□□□□□ -0.66
HDLBP-206ENST00000417540 SPATA20Q8TB22 786 aa10.95□□□□□ -0.66
HDLBP-206ENST00000417540 CACTINQ8WUQ7 758 aaKnown RBP10.95□□□□□ -0.66
HDLBP-206ENST00000417540 SEMA4DQ92854 862 aa10.95□□□□□ -0.66
HDLBP-206ENST00000417540 LRRC3BQ96PB8 259 aa10.95□□□□□ -0.66
HDLBP-206ENST00000417540 MMS19Q96T76 1030 aa10.95□□□□□ -0.66
HDLBP-206ENST00000417540 ARID3AQ99856 593 aa10.95□□□□□ -0.66
HDLBP-206ENST00000417540 SLITRK6Q9H5Y7 841 aa10.95□□□□□ -0.66
HDLBP-206ENST00000417540 AVENQ9NQS1 362 aaPredicted RBP10.95□□□□□ -0.66
HDLBP-206ENST00000417540 ARHGEF3Q9NR81 526 aa10.95□□□□□ -0.66
HDLBP-206ENST00000417540 CIZ1Q9ULV3 898 aaPredicted RBP10.95□□□□□ -0.66
HDLBP-206ENST00000417540 GTF3C5Q9Y5Q8 519 aaPredicted RBP10.95□□□□□ -0.66
HDLBP-206ENST00000417540 DNAH14Q0VDD8 3507 aa10.95□□□□□ -0.66
HDLBP-206ENST00000417540 FANCMQ8IYD8 2048 aa10.94□□□□□ -0.66
HDLBP-206ENST00000417540 CALUO43852 315 aaPredicted RBP10.94□□□□□ -0.66
HDLBP-206ENST00000417540 PRPF40AO75400 957 aaKnown RBP10.94□□□□□ -0.66
HDLBP-206ENST00000417540 CCDC130P13994 396 aa10.94□□□□□ -0.66
HDLBP-206ENST00000417540 HMGA1P17096 107 aaKnown RBP10.94□□□□□ -0.66
HDLBP-206ENST00000417540 PTPN2P17706 415 aa10.94□□□□□ -0.66
HDLBP-206ENST00000417540 TNNC1P63316 161 aa10.94□□□□□ -0.66
HDLBP-206ENST00000417540 GPC5P78333 572 aa10.94□□□□□ -0.66
HDLBP-206ENST00000417540 MYL7Q01449 175 aa10.94□□□□□ -0.66
HDLBP-206ENST00000417540 TCF15Q12870 199 aa10.94□□□□□ -0.66
HDLBP-206ENST00000417540 PSMD2Q13200 908 aa10.94□□□□□ -0.66
HDLBP-206ENST00000417540 SURF1Q15526 300 aa10.94□□□□□ -0.66
HDLBP-206ENST00000417540 ZACNQ401N2 412 aa10.94□□□□□ -0.66
HDLBP-206ENST00000417540 CBWD6Q4V339 395 aa10.94□□□□□ -0.66
HDLBP-206ENST00000417540 DCAF17Q5H9S7 520 aaPredicted RBP10.94□□□□□ -0.66
HDLBP-206ENST00000417540 WDR44Q5JSH3 913 aa10.94□□□□□ -0.66
HDLBP-206ENST00000417540 CBWD3Q5JTY5 395 aa10.94□□□□□ -0.66
HDLBP-206ENST00000417540 CBWD5Q5RIA9 395 aa10.94□□□□□ -0.66
HDLBP-206ENST00000417540 KLHL10Q6JEL2 608 aa10.94□□□□□ -0.66
HDLBP-206ENST00000417540 SV2AQ7L0J3 742 aa10.94□□□□□ -0.66
HDLBP-206ENST00000417540 ZC3H3Q8IXZ2 948 aaKnown RBP10.94□□□□□ -0.66
HDLBP-206ENST00000417540 UBALD2Q8IYN6 164 aa10.94□□□□□ -0.66
HDLBP-206ENST00000417540 GOLGA5Q8TBA6 731 aa10.94□□□□□ -0.66
HDLBP-206ENST00000417540 ZSCAN18Q8TBC5 510 aaPredicted RBP10.94□□□□□ -0.66
HDLBP-206ENST00000417540 FAM200AQ8TCP9 573 aa10.94□□□□□ -0.66
HDLBP-206ENST00000417540 SMARCE1Q969G3 411 aa10.94□□□□□ -0.66
HDLBP-206ENST00000417540 PCED1BQ96HM7 432 aa10.94□□□□□ -0.66
HDLBP-206ENST00000417540 ZFYVE19Q96K21 471 aa10.94□□□□□ -0.66
HDLBP-206ENST00000417540 TBC1D17Q9HA65 648 aa10.94□□□□□ -0.66
HDLBP-206ENST00000417540 KIAA1586Q9HCI6 787 aa10.94□□□□□ -0.66
HDLBP-206ENST00000417540 FBXL21Q9UKT6 434 aa10.94□□□□□ -0.66
HDLBP-206ENST00000417540 MAGED2Q9UNF1 606 aaPredicted RBP10.94□□□□□ -0.66
HDLBP-206ENST00000417540 CCL26Q9Y258 94 aa10.94□□□□□ -0.66
HDLBP-206ENST00000417540 PCDHB5Q9Y5E4 795 aa10.94□□□□□ -0.66
HDLBP-206ENST00000417540 GOLGA6L4A6NEF3 574 aa10.93□□□□□ -0.66
HDLBP-206ENST00000417540 GLULP15104 373 aa10.93□□□□□ -0.66
HDLBP-206ENST00000417540 CD72P21854 359 aa10.93□□□□□ -0.66
HDLBP-206ENST00000417540 BDNFP23560 247 aa10.93□□□□□ -0.66
HDLBP-206ENST00000417540 ALDH1A3P47895 512 aa10.93□□□□□ -0.66
HDLBP-206ENST00000417540 SOX9P48436 509 aa10.93□□□□□ -0.66
HDLBP-206ENST00000417540 VAMP7P51809 220 aa10.93□□□□□ -0.66
HDLBP-206ENST00000417540 EPHB3P54753 998 aa10.93□□□□□ -0.66
HDLBP-206ENST00000417540 STX17P56962 302 aa10.93□□□□□ -0.66
HDLBP-206ENST00000417540 SNRPFP62306 86 aaKnown RBP10.93□□□□□ -0.66
HDLBP-206ENST00000417540 NOP14P78316 857 aaKnown RBP10.93□□□□□ -0.66
HDLBP-206ENST00000417540 CLDN10P78369 228 aa10.93□□□□□ -0.66
HDLBP-206ENST00000417540 CYP27A1Q02318 531 aa10.93□□□□□ -0.66
HDLBP-206ENST00000417540 IFRD2Q12894 506 aaPredicted RBP10.93□□□□□ -0.66
HDLBP-206ENST00000417540 MYO1EQ12965 1108 aa10.93□□□□□ -0.66
HDLBP-206ENST00000417540 NFIL3Q16649 462 aa10.93□□□□□ -0.66
HDLBP-206ENST00000417540 WDR72Q3MJ13 1102 aa10.93□□□□□ -0.66
HDLBP-206ENST00000417540 GPR158Q5T848 1215 aa10.93□□□□□ -0.66
HDLBP-206ENST00000417540 ZNF658Q5TYW1 1059 aaPredicted RBP10.93□□□□□ -0.66
HDLBP-206ENST00000417540 NAIF1Q69YI7 327 aaPredicted RBP10.93□□□□□ -0.66
HDLBP-206ENST00000417540 IQCEQ6IPM2 695 aa10.93□□□□□ -0.66
HDLBP-206ENST00000417540 DNAJB7Q7Z6W7 309 aaPredicted RBP10.93□□□□□ -0.66
HDLBP-206ENST00000417540 FAM35AQ86V20 835 aa10.93□□□□□ -0.66
HDLBP-206ENST00000417540 SCN4BQ8IWT1 228 aa10.93□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms