RNA–Protein interactions for RNA: ENST00000417496.6

HDAC9-208, Transcript of histone deacetylase 9, humanhuman

TSL 2 BASIC

Gene HDAC9, Length 2,524 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-208ENST00000417496 CALB1P05937 261 aa15.24■□□□□ 0.03
HDAC9-208ENST00000417496 CDC25CP30307 473 aa15.24■□□□□ 0.03
HDAC9-208ENST00000417496 CTCFP49711 727 aaPredicted RBP15.24■□□□□ 0.03
HDAC9-208ENST00000417496 CDH8P55286 799 aa15.24■□□□□ 0.03
HDAC9-208ENST00000417496 OTUD4Q01804 1114 aaKnown RBP15.24■□□□□ 0.03
HDAC9-208ENST00000417496 VSIG1Q86XK7 387 aa15.24■□□□□ 0.03
HDAC9-208ENST00000417496 TRIM50Q86XT4 487 aa15.24■□□□□ 0.03
HDAC9-208ENST00000417496 THNSL1Q8IYQ7 743 aa15.24■□□□□ 0.03
HDAC9-208ENST00000417496 UBR7Q8N806 425 aa15.24■□□□□ 0.03
HDAC9-208ENST00000417496 CEP120Q8N960 986 aa15.24■□□□□ 0.03
HDAC9-208ENST00000417496 TMEM35BQ8NCS4 154 aa15.24■□□□□ 0.03
HDAC9-208ENST00000417496 WDR83Q9BRX9 315 aaKnown RBP15.24■□□□□ 0.03
HDAC9-208ENST00000417496 ADAMTS5Q9UNA0 930 aa15.24■□□□□ 0.03
HDAC9-208ENST00000417496 POLIQ9UNA4 740 aa15.24■□□□□ 0.03
HDAC9-208ENST00000417496 CLUHO75153 1309 aa15.24■□□□□ 0.03
HDAC9-208ENST00000417496 C3orf70A6NLC5 250 aaPredicted RBP15.24■□□□□ 0.03
HDAC9-208ENST00000417496 CST8O60676 142 aa15.24■□□□□ 0.03
HDAC9-208ENST00000417496 CD19P15391 556 aa15.24■□□□□ 0.03
HDAC9-208ENST00000417496 PSMA2P25787 234 aa15.24■□□□□ 0.03
HDAC9-208ENST00000417496 GBP2P32456 591 aaPredicted RBP15.24■□□□□ 0.03
HDAC9-208ENST00000417496 GMPSP49915 693 aaPredicted RBP15.24■□□□□ 0.03
HDAC9-208ENST00000417496 SPARCL1Q14515 664 aa15.24■□□□□ 0.03
HDAC9-208ENST00000417496 MORF4L2Q15014 288 aa15.24■□□□□ 0.03
HDAC9-208ENST00000417496 PTPN20Q4JDL3 420 aa15.24■□□□□ 0.03
HDAC9-208ENST00000417496 PPP1R15BQ5SWA1 713 aa15.24■□□□□ 0.03
HDAC9-208ENST00000417496 TLDC1Q6P9B6 456 aa15.24■□□□□ 0.03
HDAC9-208ENST00000417496 ZNF449Q6P9G9 518 aa15.24■□□□□ 0.03
HDAC9-208ENST00000417496 CENPUQ71F23 418 aa15.24■□□□□ 0.03
HDAC9-208ENST00000417496 L3MBTL3Q96JM7 780 aaPredicted RBP15.24■□□□□ 0.03
HDAC9-208ENST00000417496 MSCO60682 206 aa15.23■□□□□ 0.03
HDAC9-208ENST00000417496 DIAPH2O60879 1101 aa15.23■□□□□ 0.03
HDAC9-208ENST00000417496 ATG7O95352 703 aa15.23■□□□□ 0.03
HDAC9-208ENST00000417496 UBA1P22314 1058 aaKnown RBP15.23■□□□□ 0.03
HDAC9-208ENST00000417496 HIF1AQ16665 826 aa15.23■□□□□ 0.03
HDAC9-208ENST00000417496 CCDC142Q17RM4 750 aa15.23■□□□□ 0.03
HDAC9-208ENST00000417496 DRICH1Q6PGQ1 229 aaPredicted RBP15.23■□□□□ 0.03
HDAC9-208ENST00000417496 LVRNQ6Q4G3 990 aa15.23■□□□□ 0.03
HDAC9-208ENST00000417496 C3orf62Q6ZUJ4 267 aa15.23■□□□□ 0.03
HDAC9-208ENST00000417496 RHPN2Q8IUC4 686 aa15.23■□□□□ 0.03
HDAC9-208ENST00000417496 DRG1Q9Y295 367 aaKnown RBP15.23■□□□□ 0.03
HDAC9-208ENST00000417496 AFG3L2Q9Y4W6 797 aa15.23■□□□□ 0.03
HDAC9-208ENST00000417496 MYH9P35579 1960 aaKnown RBP15.23■□□□□ 0.03
HDAC9-208ENST00000417496 SPDYE16A6NNV3 312 aaPredicted RBP15.23■□□□□ 0.03
HDAC9-208ENST00000417496 TYROBPO43914 113 aa15.23■□□□□ 0.03
HDAC9-208ENST00000417496 LRCH4O75427 683 aa15.23■□□□□ 0.03
HDAC9-208ENST00000417496 CBX6O95503 412 aa15.23■□□□□ 0.03
HDAC9-208ENST00000417496 ALADP13716 330 aa15.23■□□□□ 0.03
HDAC9-208ENST00000417496 ADRA1DP25100 572 aa15.23■□□□□ 0.03
HDAC9-208ENST00000417496 TRPC3Q13507 836 aa15.23■□□□□ 0.03
HDAC9-208ENST00000417496 MOGSQ13724 837 aa15.23■□□□□ 0.03
HDAC9-208ENST00000417496 DLK2Q6UY11 383 aa15.23■□□□□ 0.03
HDAC9-208ENST00000417496 CATSPERGQ6ZRH7 1159 aa15.23■□□□□ 0.03
HDAC9-208ENST00000417496 BRSK2Q8IWQ3 736 aa15.23■□□□□ 0.03
HDAC9-208ENST00000417496 RIBC1Q8N443 379 aaPredicted RBP15.23■□□□□ 0.03
HDAC9-208ENST00000417496 SLC35B2Q8TB61 432 aa15.23■□□□□ 0.03
HDAC9-208ENST00000417496 CCHCR1Q8TD31 782 aa15.23■□□□□ 0.03
HDAC9-208ENST00000417496 CPT1BQ92523 772 aa15.23■□□□□ 0.03
HDAC9-208ENST00000417496 LRRC37BQ96QE4 947 aa15.23■□□□□ 0.03
HDAC9-208ENST00000417496 NIF3L1Q9GZT8 377 aa15.23■□□□□ 0.03
HDAC9-208ENST00000417496 R3HDMLQ9H3Y0 253 aa15.23■□□□□ 0.03
HDAC9-208ENST00000417496 EBF2Q9HAK2 575 aa15.23■□□□□ 0.03
HDAC9-208ENST00000417496 RABGEF1Q9UJ41 708 aa15.23■□□□□ 0.03
HDAC9-208ENST00000417496 STARD13Q9Y3M8 1113 aa15.23■□□□□ 0.03
HDAC9-208ENST00000417496 NUMBLQ9Y6R0 609 aa15.23■□□□□ 0.03
HDAC9-208ENST00000417496 ARID2Q68CP9 1835 aa15.23■□□□□ 0.03
HDAC9-208ENST00000417496 COL11A1P12107 1806 aaPredicted RBP15.23■□□□□ 0.03
HDAC9-208ENST00000417496 ITGAVP06756 1048 aa15.22■□□□□ 0.03
HDAC9-208ENST00000417496 KRT19P08727 400 aa15.22■□□□□ 0.03
HDAC9-208ENST00000417496 KRT3P12035 628 aa15.22■□□□□ 0.03
HDAC9-208ENST00000417496 CCNB1P14635 433 aa15.22■□□□□ 0.03
HDAC9-208ENST00000417496 STAT5BP51692 787 aa15.22■□□□□ 0.03
HDAC9-208ENST00000417496 ZNF280AP59817 542 aaPredicted RBP15.22■□□□□ 0.03
HDAC9-208ENST00000417496 MCL1Q07820 350 aa15.22■□□□□ 0.03
HDAC9-208ENST00000417496 OVGP1Q12889 678 aa15.22■□□□□ 0.03
HDAC9-208ENST00000417496 PIGHQ14442 188 aaPredicted RBP15.22■□□□□ 0.03
HDAC9-208ENST00000417496 LY6KQ17RY6 165 aa15.22■□□□□ 0.03
HDAC9-208ENST00000417496 LRRC38Q5VT99 294 aa15.22■□□□□ 0.03
HDAC9-208ENST00000417496 UNC45BQ8IWX7 931 aa15.22■□□□□ 0.03
HDAC9-208ENST00000417496 RNF149Q8NC42 400 aa15.22■□□□□ 0.03
HDAC9-208ENST00000417496 LRRC8CQ8TDW0 803 aa15.22■□□□□ 0.03
HDAC9-208ENST00000417496 PYROXD1Q8WU10 500 aa15.22■□□□□ 0.03
HDAC9-208ENST00000417496 NKD2Q969F2 451 aaPredicted RBP15.22■□□□□ 0.03
HDAC9-208ENST00000417496 TTC25Q96NG3 672 aa15.22■□□□□ 0.03
HDAC9-208ENST00000417496 PLCD4Q9BRC7 762 aa15.22■□□□□ 0.03
HDAC9-208ENST00000417496 FOXP3Q9BZS1 431 aa15.22■□□□□ 0.03
HDAC9-208ENST00000417496 PIK3R2O00459 728 aa15.22■□□□□ 0.03
HDAC9-208ENST00000417496 PRPF4O43172 522 aaKnown RBP eCLIP15.22■□□□□ 0.03
HDAC9-208ENST00000417496 B4GALT5O43286 388 aa15.22■□□□□ 0.03
HDAC9-208ENST00000417496 EDF1O60869 148 aaKnown RBP15.22■□□□□ 0.03
HDAC9-208ENST00000417496 RPL22P35268 128 aaKnown RBP15.22■□□□□ 0.03
HDAC9-208ENST00000417496 ASPAP45381 313 aa15.22■□□□□ 0.03
HDAC9-208ENST00000417496 ACVR2BQ13705 512 aa15.22■□□□□ 0.03
HDAC9-208ENST00000417496 PDK4Q16654 411 aa15.22■□□□□ 0.03
HDAC9-208ENST00000417496 MAPK6Q16659 721 aa15.22■□□□□ 0.03
HDAC9-208ENST00000417496 DUOXA2Q1HG44 320 aa15.22■□□□□ 0.03
HDAC9-208ENST00000417496 PLEKHG4Q58EX7 1191 aa15.22■□□□□ 0.03
HDAC9-208ENST00000417496 HHATQ5VTY9 493 aa15.22■□□□□ 0.03
HDAC9-208ENST00000417496 OTOAQ7RTW8 1153 aa15.22■□□□□ 0.03
HDAC9-208ENST00000417496 TDRPQ86YL5 185 aa15.22■□□□□ 0.03
HDAC9-208ENST00000417496 WDR49Q8IV35 697 aa15.22■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 68.2 ms