RNA–Protein interactions for RNA: ENST00000417300.1

GABRE-202, Transcript of gamma-aminobutyric acid type A receptor epsilon subunit, humanhuman

TSL 2

Gene GABRE, Length 619 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRE-202ENST00000417300 SMYD3Q9H7B4 428 aa12.65□□□□□ -0.38
GABRE-202ENST00000417300 ACP6Q9NPH0 428 aa12.65□□□□□ -0.38
GABRE-202ENST00000417300 GDAP2Q9NXN4 497 aa12.65□□□□□ -0.38
GABRE-202ENST00000417300 TET1Q8NFU7 2136 aa12.64□□□□□ -0.39
GABRE-202ENST00000417300 CILPO75339 1184 aa12.64□□□□□ -0.39
GABRE-202ENST00000417300 ABL1P00519 1130 aa12.64□□□□□ -0.39
GABRE-202ENST00000417300 MMEP08473 750 aa12.64□□□□□ -0.39
GABRE-202ENST00000417300 PAEPP09466 180 aa12.64□□□□□ -0.39
GABRE-202ENST00000417300 H2AFZP0C0S5 128 aa12.64□□□□□ -0.39
GABRE-202ENST00000417300 CD58P19256 250 aa12.64□□□□□ -0.39
GABRE-202ENST00000417300 RAP1GAPP47736 663 aa12.64□□□□□ -0.39
GABRE-202ENST00000417300 SCNN1GP51170 649 aa12.64□□□□□ -0.39
GABRE-202ENST00000417300 DNTTIP2Q5QJE6 756 aaKnown RBP12.64□□□□□ -0.39
GABRE-202ENST00000417300 TAF3Q5VWG9 929 aa12.64□□□□□ -0.39
GABRE-202ENST00000417300 TRIM72Q6ZMU5 477 aa12.64□□□□□ -0.39
GABRE-202ENST00000417300 H2AFVQ71UI9 128 aa12.64□□□□□ -0.39
GABRE-202ENST00000417300 PALB2Q86YC2 1186 aa12.64□□□□□ -0.39
GABRE-202ENST00000417300 DBF4BQ8NFT6 615 aa12.64□□□□□ -0.39
GABRE-202ENST00000417300 WHAMMQ8TF30 809 aa12.64□□□□□ -0.39
GABRE-202ENST00000417300 PCDHB18PQ96TA0 734 aa12.64□□□□□ -0.39
GABRE-202ENST00000417300 WNT8AQ9H1J5 351 aa12.64□□□□□ -0.39
GABRE-202ENST00000417300 ISCUQ9H1K1 167 aa12.64□□□□□ -0.39
GABRE-202ENST00000417300 GOLGA2P5Q9HBQ8 144 aa12.64□□□□□ -0.39
GABRE-202ENST00000417300 RNF19AQ9NV58 838 aa12.64□□□□□ -0.39
GABRE-202ENST00000417300 SEPT11Q9NVA2 429 aaKnown RBP12.64□□□□□ -0.39
GABRE-202ENST00000417300 MIOSQ9NXC5 875 aa12.64□□□□□ -0.39
GABRE-202ENST00000417300 TRIM10Q9UDY6 481 aa12.64□□□□□ -0.39
GABRE-202ENST00000417300 BARX2Q9UMQ3 279 aaPredicted RBP12.64□□□□□ -0.39
GABRE-202ENST00000417300 GUCA1BQ9UMX6 200 aa12.64□□□□□ -0.39
GABRE-202ENST00000417300 TFR2Q9UP52 801 aa12.64□□□□□ -0.39
GABRE-202ENST00000417300 VPS13AQ96RL7 3174 aa12.64□□□□□ -0.39
GABRE-202ENST00000417300 DMXL1Q9Y485 3027 aa12.63□□□□□ -0.39
GABRE-202ENST00000417300 MICAL3Q7RTP6 2002 aa12.63□□□□□ -0.39
GABRE-202ENST00000417300 A0A0A6YYK5 440 aaPredicted RBP12.63□□□□□ -0.39
GABRE-202ENST00000417300 ANKRD62A6NC57 917 aa12.63□□□□□ -0.39
GABRE-202ENST00000417300 KPNA7A9QM74 516 aa12.63□□□□□ -0.39
GABRE-202ENST00000417300 RTN2O75298 545 aa12.63□□□□□ -0.39
GABRE-202ENST00000417300 TACC1O75410 805 aa12.63□□□□□ -0.39
GABRE-202ENST00000417300 CYP1A1P04798 512 aaPredicted RBP12.63□□□□□ -0.39
GABRE-202ENST00000417300 FAM163BP0C2L3 166 aa12.63□□□□□ -0.39
GABRE-202ENST00000417300 TMEM253P0C7T8 217 aa12.63□□□□□ -0.39
GABRE-202ENST00000417300 PAX3P23760 479 aa12.63□□□□□ -0.39
GABRE-202ENST00000417300 AVPR2P30518 371 aa12.63□□□□□ -0.39
GABRE-202ENST00000417300 RPL9P32969 192 aaKnown RBP12.63□□□□□ -0.39
GABRE-202ENST00000417300 AFF1P51825 1210 aaKnown RBP12.63□□□□□ -0.39
GABRE-202ENST00000417300 VCPP55072 806 aaKnown RBP12.63□□□□□ -0.39
GABRE-202ENST00000417300 CDH8P55286 799 aa12.63□□□□□ -0.39
GABRE-202ENST00000417300 GNG11P61952 73 aa12.63□□□□□ -0.39
GABRE-202ENST00000417300 ACAP1Q15027 740 aa12.63□□□□□ -0.39
GABRE-202ENST00000417300 ST3GAL2Q16842 350 aa12.63□□□□□ -0.39
GABRE-202ENST00000417300 CLEC16AQ2KHT3 1053 aa12.63□□□□□ -0.39
GABRE-202ENST00000417300 PPP1R2P3Q6NXS1 205 aa12.63□□□□□ -0.39
GABRE-202ENST00000417300 EP400NLQ6ZTU2 488 aa12.63□□□□□ -0.39
GABRE-202ENST00000417300 DPH6Q7L8W6 267 aa12.63□□□□□ -0.39
GABRE-202ENST00000417300 LIMS2Q7Z4I7 341 aa12.63□□□□□ -0.39
GABRE-202ENST00000417300 SPRED2Q7Z698 418 aa12.63□□□□□ -0.39
GABRE-202ENST00000417300 RNF10Q8N5U6 811 aaKnown RBP12.63□□□□□ -0.39
GABRE-202ENST00000417300 RNF169Q8NCN4 708 aa12.63□□□□□ -0.39
GABRE-202ENST00000417300 KIF18AQ8NI77 898 aa12.63□□□□□ -0.39
GABRE-202ENST00000417300 SECISBP2LQ93073 1101 aaKnown RBP12.63□□□□□ -0.39
GABRE-202ENST00000417300 RMDN1Q96DB5 314 aa12.63□□□□□ -0.39
GABRE-202ENST00000417300 PACSIN1Q9BY11 444 aa12.63□□□□□ -0.39
GABRE-202ENST00000417300 TMEM161AQ9NX61 479 aa12.63□□□□□ -0.39
GABRE-202ENST00000417300 SNX9Q9Y5X1 595 aa12.63□□□□□ -0.39
GABRE-202ENST00000417300 DNAH14Q0VDD8 3507 aa12.63□□□□□ -0.39
GABRE-202ENST00000417300 NCANO14594 1321 aa12.62□□□□□ -0.39
GABRE-202ENST00000417300 TTC3P53804 2025 aa12.62□□□□□ -0.39
GABRE-202ENST00000417300 ZNF292O60281 2723 aa12.62□□□□□ -0.39
GABRE-202ENST00000417300 PODXLO00592 558 aa12.62□□□□□ -0.39
GABRE-202ENST00000417300 ENPP3O14638 875 aa12.62□□□□□ -0.39
GABRE-202ENST00000417300 SPTLC1O15269 473 aa12.62□□□□□ -0.39
GABRE-202ENST00000417300 THAP12O43422 761 aa12.62□□□□□ -0.39
GABRE-202ENST00000417300 PFKMP08237 780 aa12.62□□□□□ -0.39
GABRE-202ENST00000417300 UNGP13051 313 aaPredicted RBP12.62□□□□□ -0.39
GABRE-202ENST00000417300 RFC2P35250 354 aa12.62□□□□□ -0.39
GABRE-202ENST00000417300 NBL1P41271 181 aa12.62□□□□□ -0.39
GABRE-202ENST00000417300 RAD23BP54727 409 aa12.62□□□□□ -0.39
GABRE-202ENST00000417300 GALCP54803 685 aa12.62□□□□□ -0.39
GABRE-202ENST00000417300 CENPCQ03188 943 aa12.62□□□□□ -0.39
GABRE-202ENST00000417300 TUSC3Q13454 348 aa12.62□□□□□ -0.39
GABRE-202ENST00000417300 GLB1LQ6UWU2 654 aa12.62□□□□□ -0.39
GABRE-202ENST00000417300 SYT10Q6XYQ8 523 aa12.62□□□□□ -0.39
GABRE-202ENST00000417300 UNC93AQ86WB7 457 aa12.62□□□□□ -0.39
GABRE-202ENST00000417300 HERC6Q8IVU3 1022 aa12.62□□□□□ -0.39
GABRE-202ENST00000417300 TOP6BLQ8N6T0 577 aa12.62□□□□□ -0.39
GABRE-202ENST00000417300 SLC4A11Q8NBS3 891 aa12.62□□□□□ -0.39
GABRE-202ENST00000417300 ZNF606Q8WXB4 792 aa12.62□□□□□ -0.39
GABRE-202ENST00000417300 RSPH1Q8WYR4 309 aa12.62□□□□□ -0.39
GABRE-202ENST00000417300 NKD2Q969F2 451 aaPredicted RBP12.62□□□□□ -0.39
GABRE-202ENST00000417300 DDX27Q96GQ7 796 aaKnown RBP12.62□□□□□ -0.39
GABRE-202ENST00000417300 SCLYQ96I15 445 aa12.62□□□□□ -0.39
GABRE-202ENST00000417300 UROC1Q96N76 676 aa12.62□□□□□ -0.39
GABRE-202ENST00000417300 MMS19Q96T76 1030 aa12.62□□□□□ -0.39
GABRE-202ENST00000417300 IRX2Q9BZI1 471 aaPredicted RBP12.62□□□□□ -0.39
GABRE-202ENST00000417300 ELOVL4Q9GZR5 314 aa12.62□□□□□ -0.39
GABRE-202ENST00000417300 TAS2R14Q9NYV8 317 aa12.62□□□□□ -0.39
GABRE-202ENST00000417300 PCDHGC3Q9UN70 934 aa12.62□□□□□ -0.39
GABRE-202ENST00000417300 FANCGO15287 622 aa12.61□□□□□ -0.39
GABRE-202ENST00000417300 MED7O43513 233 aa12.61□□□□□ -0.39
GABRE-202ENST00000417300 CALCAP01258 141 aa12.61□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms