RNA–Protein interactions for RNA: ENST00000416649.6

NCKIPSD-204, Transcript of NCK interacting protein with SH3 domain, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NCKIPSD, Length 2,925 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSD-204ENST00000416649 USTQ9Y2C2 406 aa15.45■□□□□ 0.06
NCKIPSD-204ENST00000416649 MTO1Q9Y2Z2 717 aaKnown RBP15.45■□□□□ 0.06
NCKIPSD-204ENST00000416649 GMEB1Q9Y692 573 aa15.45■□□□□ 0.06
NCKIPSD-204ENST00000416649 BMP3P12645 472 aa15.44■□□□□ 0.06
NCKIPSD-204ENST00000416649 EPHB1P54762 984 aa15.44■□□□□ 0.06
NCKIPSD-204ENST00000416649 NCOA4Q13772 614 aa15.44■□□□□ 0.06
NCKIPSD-204ENST00000416649 GRAMD1BQ3KR37 738 aa15.44■□□□□ 0.06
NCKIPSD-204ENST00000416649 EPC2Q52LR7 807 aa15.44■□□□□ 0.06
NCKIPSD-204ENST00000416649 SYDE1Q6ZW31 735 aaPredicted RBP15.44■□□□□ 0.06
NCKIPSD-204ENST00000416649 TREML1Q86YW5 311 aa15.44■□□□□ 0.06
NCKIPSD-204ENST00000416649 TMPRSS6Q8IU80 811 aa15.44■□□□□ 0.06
NCKIPSD-204ENST00000416649 ADGRF4Q8IZF3 695 aa15.44■□□□□ 0.06
NCKIPSD-204ENST00000416649 CYP2W1Q8TAV3 490 aa15.44■□□□□ 0.06
NCKIPSD-204ENST00000416649 FHDC1Q9C0D6 1143 aaPredicted RBP15.44■□□□□ 0.06
NCKIPSD-204ENST00000416649 RANBP17Q9H2T7 1088 aaKnown RBP15.44■□□□□ 0.06
NCKIPSD-204ENST00000416649 ZNF148Q9UQR1 794 aa15.44■□□□□ 0.06
NCKIPSD-204ENST00000416649 PPP1R11O60927 126 aaPredicted RBP15.44■□□□□ 0.06
NCKIPSD-204ENST00000416649 GH2P01242 217 aa15.44■□□□□ 0.06
NCKIPSD-204ENST00000416649 IFNB1P01574 187 aa15.44■□□□□ 0.06
NCKIPSD-204ENST00000416649 MAP3K10Q02779 954 aa15.44■□□□□ 0.06
NCKIPSD-204ENST00000416649 TRMT5Q32P41 509 aaKnown RBP15.44■□□□□ 0.06
NCKIPSD-204ENST00000416649 BBOF1Q8ND07 529 aa15.44■□□□□ 0.06
NCKIPSD-204ENST00000416649 CCDC28BQ9BUN5 200 aa15.44■□□□□ 0.06
NCKIPSD-204ENST00000416649 PIK3CDO00329 1044 aa15.44■□□□□ 0.06
NCKIPSD-204ENST00000416649 RGS2P41220 211 aa15.44■□□□□ 0.06
NCKIPSD-204ENST00000416649 GPS1Q13098 491 aa15.44■□□□□ 0.06
NCKIPSD-204ENST00000416649 PDK3Q15120 406 aa15.44■□□□□ 0.06
NCKIPSD-204ENST00000416649 ZCCHC9Q8N567 271 aaKnown RBP15.44■□□□□ 0.06
NCKIPSD-204ENST00000416649 EPS8L1Q8TE68 723 aa15.44■□□□□ 0.06
NCKIPSD-204ENST00000416649 USP6NLQ92738 828 aa15.44■□□□□ 0.06
NCKIPSD-204ENST00000416649 DGCR14Q96DF8 476 aaKnown RBP15.44■□□□□ 0.06
NCKIPSD-204ENST00000416649 FAM111AQ96PZ2 611 aa15.44■□□□□ 0.06
NCKIPSD-204ENST00000416649 KCNK13Q9HB14 408 aa15.44■□□□□ 0.06
NCKIPSD-204ENST00000416649 SERPINA10Q9UK55 444 aa15.44■□□□□ 0.06
NCKIPSD-204ENST00000416649 RABGAP1Q9Y3P9 1069 aa15.44■□□□□ 0.06
NCKIPSD-204ENST00000416649 KIF13BQ9NQT8 1826 aa15.43■□□□□ 0.06
NCKIPSD-204ENST00000416649 VCLP18206 1134 aa15.43■□□□□ 0.06
NCKIPSD-204ENST00000416649 CD58P19256 250 aa15.43■□□□□ 0.06
NCKIPSD-204ENST00000416649 PEX2P28328 305 aa15.43■□□□□ 0.06
NCKIPSD-204ENST00000416649 SSTR1P30872 391 aa15.43■□□□□ 0.06
NCKIPSD-204ENST00000416649 HOXA13P31271 388 aaPredicted RBP15.43■□□□□ 0.06
NCKIPSD-204ENST00000416649 SERPINB6P35237 376 aa15.43■□□□□ 0.06
NCKIPSD-204ENST00000416649 ALDH18A1P54886 795 aaKnown RBP15.43■□□□□ 0.06
NCKIPSD-204ENST00000416649 TRIP10Q15642 601 aa15.43■□□□□ 0.06
NCKIPSD-204ENST00000416649 TRIM67Q6ZTA4 783 aa15.43■□□□□ 0.06
NCKIPSD-204ENST00000416649 NET1Q7Z628 596 aaPredicted RBP15.43■□□□□ 0.06
NCKIPSD-204ENST00000416649 GRIP2Q9C0E4 1043 aa15.43■□□□□ 0.06
NCKIPSD-204ENST00000416649 SMIM31A0A1B0GVY4 71 aa15.43■□□□□ 0.06
NCKIPSD-204ENST00000416649 SPECC1L-ADORA2AF8WAN1 911 aa15.43■□□□□ 0.06
NCKIPSD-204ENST00000416649 ACTR3P61158 418 aa15.43■□□□□ 0.06
NCKIPSD-204ENST00000416649 BFSP1Q12934 665 aa15.43■□□□□ 0.06
NCKIPSD-204ENST00000416649 CYLC2Q14093 348 aaPredicted RBP15.43■□□□□ 0.06
NCKIPSD-204ENST00000416649 B3GNT6Q6ZMB0 384 aa15.43■□□□□ 0.06
NCKIPSD-204ENST00000416649 RILPQ96NA2 401 aa15.43■□□□□ 0.06
NCKIPSD-204ENST00000416649 GCNAQ96QF7 691 aa15.43■□□□□ 0.06
NCKIPSD-204ENST00000416649 TMEM39BQ9GZU3 492 aa15.43■□□□□ 0.06
NCKIPSD-204ENST00000416649 PI4KBQ9UBF8 816 aa15.43■□□□□ 0.06
NCKIPSD-204ENST00000416649 PAIP2BQ9ULR5 123 aaKnown RBP15.43■□□□□ 0.06
NCKIPSD-204ENST00000416649 F8W8V4 182 aa15.42■□□□□ 0.06
NCKIPSD-204ENST00000416649 ABHD2P08910 425 aa15.42■□□□□ 0.06
NCKIPSD-204ENST00000416649 SPATA31C1P0DKV0 1188 aa15.42■□□□□ 0.06
NCKIPSD-204ENST00000416649 UQCRBP14927 111 aa15.42■□□□□ 0.06
NCKIPSD-204ENST00000416649 HMGB2P26583 209 aaKnown RBP15.42■□□□□ 0.06
NCKIPSD-204ENST00000416649 RAP1GDS1P52306 607 aa15.42■□□□□ 0.06
NCKIPSD-204ENST00000416649 CETN1Q12798 172 aa15.42■□□□□ 0.06
NCKIPSD-204ENST00000416649 TFDP1Q14186 410 aa15.42■□□□□ 0.06
NCKIPSD-204ENST00000416649 TMEM259Q4ZIN3 620 aa15.42■□□□□ 0.06
NCKIPSD-204ENST00000416649 PRPF39Q86UA1 669 aaKnown RBP15.42■□□□□ 0.06
NCKIPSD-204ENST00000416649 HSPBAP1Q96EW2 488 aa15.42■□□□□ 0.06
NCKIPSD-204ENST00000416649 SIKE1Q9BRV8 207 aa15.42■□□□□ 0.06
NCKIPSD-204ENST00000416649 TMEM117Q9H0C3 514 aa15.42■□□□□ 0.06
NCKIPSD-204ENST00000416649 JMJD4Q9H9V9 463 aa15.42■□□□□ 0.06
NCKIPSD-204ENST00000416649 ARHGEF4Q9NR80 690 aa15.42■□□□□ 0.06
NCKIPSD-204ENST00000416649 LTBP1Q14766 1721 aa15.42■□□□□ 0.06
NCKIPSD-204ENST00000416649 PI4K2BG5E9Z4 385 aa15.42■□□□□ 0.06
NCKIPSD-204ENST00000416649 BOLA2-SMG1P6H3BVE0 249 aa15.42■□□□□ 0.06
NCKIPSD-204ENST00000416649 ECE1P42892 770 aa15.42■□□□□ 0.06
NCKIPSD-204ENST00000416649 ARSEP51690 589 aa15.42■□□□□ 0.06
NCKIPSD-204ENST00000416649 PLCB3Q01970 1234 aa15.42■□□□□ 0.06
NCKIPSD-204ENST00000416649 PDSS2Q86YH6 399 aa15.42■□□□□ 0.06
NCKIPSD-204ENST00000416649 OGFOD1Q8N543 542 aa15.42■□□□□ 0.06
NCKIPSD-204ENST00000416649 GDPD5Q8WTR4 605 aa15.42■□□□□ 0.06
NCKIPSD-204ENST00000416649 PTTG2Q9NZH5 202 aa15.42■□□□□ 0.06
NCKIPSD-204ENST00000416649 CCDC195A0A1B0GUA6 201 aa15.41■□□□□ 0.06
NCKIPSD-204ENST00000416649 DCAF8L1A6NGE4 600 aa15.41■□□□□ 0.06
NCKIPSD-204ENST00000416649 TISP43B9A030 160 aa15.41■□□□□ 0.06
NCKIPSD-204ENST00000416649 LPXNO60711 386 aa15.41■□□□□ 0.06
NCKIPSD-204ENST00000416649 TM7SF2O76062 418 aa15.41■□□□□ 0.06
NCKIPSD-204ENST00000416649 CLPTM1O96005 669 aa15.41■□□□□ 0.06
NCKIPSD-204ENST00000416649 DLDP09622 509 aaKnown RBP15.41■□□□□ 0.06
NCKIPSD-204ENST00000416649 KLHDC10Q6PID8 442 aa15.41■□□□□ 0.06
NCKIPSD-204ENST00000416649 C1orf228Q6PIY5 440 aa15.41■□□□□ 0.06
NCKIPSD-204ENST00000416649 DHDDSQ86SQ9 333 aa15.41■□□□□ 0.06
NCKIPSD-204ENST00000416649 ZNF554Q86TJ5 538 aa15.41■□□□□ 0.06
NCKIPSD-204ENST00000416649 TPH2Q8IWU9 490 aa15.41■□□□□ 0.06
NCKIPSD-204ENST00000416649 FAM178BQ8IXR5 827 aa15.41■□□□□ 0.06
NCKIPSD-204ENST00000416649 PIP4K2CQ8TBX8 421 aa15.41■□□□□ 0.06
NCKIPSD-204ENST00000416649 AGPAT3Q9NRZ7 376 aa15.41■□□□□ 0.06
NCKIPSD-204ENST00000416649 BTBD7Q9P203 1132 aa15.41■□□□□ 0.06
NCKIPSD-204ENST00000416649 GTF3C4Q9UKN8 822 aa15.41■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms