RNA–Protein interactions for RNA: ENST00000416204.1

LINC01238-201, Transcript of long intergenic non-protein coding RNA 1238, humanhuman

TSL 2 BASIC

Gene LINC01238, Length 590 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01238-201ENST00000416204 SYT13Q7L8C5 426 aa10.14□□□□□ -0.79
LINC01238-201ENST00000416204 TMEFF1Q8IYR6 380 aa10.14□□□□□ -0.79
LINC01238-201ENST00000416204 CHCHD4Q8N4Q1 142 aa10.14□□□□□ -0.79
LINC01238-201ENST00000416204 OR2I1PQ8NGU4 316 aa10.14□□□□□ -0.79
LINC01238-201ENST00000416204 CD101Q93033 1021 aa10.14□□□□□ -0.79
LINC01238-201ENST00000416204 ERLEC1Q96DZ1 483 aa10.14□□□□□ -0.79
LINC01238-201ENST00000416204 SLC22A12Q96S37 553 aa10.14□□□□□ -0.79
LINC01238-201ENST00000416204 GTPBP2Q9BX10 602 aaKnown RBP10.14□□□□□ -0.79
LINC01238-201ENST00000416204 ECT2Q9H8V3 914 aa10.14□□□□□ -0.79
LINC01238-201ENST00000416204 TMEM74BQ9NUR3 256 aa10.14□□□□□ -0.79
LINC01238-201ENST00000416204 TDP1Q9NUW8 608 aa10.14□□□□□ -0.79
LINC01238-201ENST00000416204 TMLHEQ9NVH6 421 aa10.14□□□□□ -0.79
LINC01238-201ENST00000416204 DUS2Q9NX74 493 aaKnown RBP10.14□□□□□ -0.79
LINC01238-201ENST00000416204 UBQLN1Q9UMX0 589 aaKnown RBP10.14□□□□□ -0.79
LINC01238-201ENST00000416204 CITO14578 2027 aa10.13□□□□□ -0.79
LINC01238-201ENST00000416204 TTC26A0AVF1 554 aa10.13□□□□□ -0.79
LINC01238-201ENST00000416204 F11P03951 625 aa10.13□□□□□ -0.79
LINC01238-201ENST00000416204 NFICP08651 508 aa10.13□□□□□ -0.79
LINC01238-201ENST00000416204 CLTAP09496 248 aa10.13□□□□□ -0.79
LINC01238-201ENST00000416204 MAPTP10636 758 aaKnown RBP10.13□□□□□ -0.79
LINC01238-201ENST00000416204 HNRNPLP14866 589 aaKnown RBP eCLIP10.13□□□□□ -0.79
LINC01238-201ENST00000416204 HMGA1P17096 107 aaKnown RBP10.13□□□□□ -0.79
LINC01238-201ENST00000416204 TYMPP19971 482 aa10.13□□□□□ -0.79
LINC01238-201ENST00000416204 TUFMP49411 452 aaKnown RBP10.13□□□□□ -0.79
LINC01238-201ENST00000416204 MCL1Q07820 350 aa10.13□□□□□ -0.79
LINC01238-201ENST00000416204 MTF1Q14872 753 aa10.13□□□□□ -0.79
LINC01238-201ENST00000416204 ZBTB6Q15916 424 aa10.13□□□□□ -0.79
LINC01238-201ENST00000416204 CCDC142Q17RM4 750 aa10.13□□□□□ -0.79
LINC01238-201ENST00000416204 ZC2HC1CQ53FD0 456 aaPredicted RBP10.13□□□□□ -0.79
LINC01238-201ENST00000416204 USP39Q53GS9 565 aaKnown RBP10.13□□□□□ -0.79
LINC01238-201ENST00000416204 TTC38Q5R3I4 469 aa10.13□□□□□ -0.79
LINC01238-201ENST00000416204 C1orf186Q6ZWK4 172 aa10.13□□□□□ -0.79
LINC01238-201ENST00000416204 CPA6Q8N4T0 437 aa10.13□□□□□ -0.79
LINC01238-201ENST00000416204 TMEM161BQ8NDZ6 487 aa10.13□□□□□ -0.79
LINC01238-201ENST00000416204 MDGA1Q8NFP4 955 aa10.13□□□□□ -0.79
LINC01238-201ENST00000416204 GTF3C6Q969F1 213 aa10.13□□□□□ -0.79
LINC01238-201ENST00000416204 ACDQ96AP0 544 aa10.13□□□□□ -0.79
LINC01238-201ENST00000416204 DRC1Q96MC2 740 aa10.13□□□□□ -0.79
LINC01238-201ENST00000416204 PYM1Q9BRP8 204 aaKnown RBP10.13□□□□□ -0.79
LINC01238-201ENST00000416204 PI4K2AQ9BTU6 479 aa10.13□□□□□ -0.79
LINC01238-201ENST00000416204 ZCWPW1Q9H0M4 648 aa10.13□□□□□ -0.79
LINC01238-201ENST00000416204 LINC00597Q9H2U6 94 aa10.13□□□□□ -0.79
LINC01238-201ENST00000416204 EBF1Q9UH73 591 aa10.13□□□□□ -0.79
LINC01238-201ENST00000416204 MBD1Q9UIS9 605 aaPredicted RBP10.13□□□□□ -0.79
LINC01238-201ENST00000416204 TBX20Q9UMR3 447 aa10.13□□□□□ -0.79
LINC01238-201ENST00000416204 DNM3Q9UQ16 869 aa10.13□□□□□ -0.79
LINC01238-201ENST00000416204 NEUROG3Q9Y4Z2 214 aa10.13□□□□□ -0.79
LINC01238-201ENST00000416204 CACNA1EQ15878 2313 aa10.13□□□□□ -0.79
LINC01238-201ENST00000416204 IGSF10Q6WRI0 2623 aa10.13□□□□□ -0.79
LINC01238-201ENST00000416204 CYB561D2O14569 222 aa10.12□□□□□ -0.79
LINC01238-201ENST00000416204 MAP3K13O43283 966 aa10.12□□□□□ -0.79
LINC01238-201ENST00000416204 TADA3O75528 432 aa10.12□□□□□ -0.79
LINC01238-201ENST00000416204 CFIP05156 583 aa10.12□□□□□ -0.79
LINC01238-201ENST00000416204 HAPLN1P10915 354 aaPredicted RBP10.12□□□□□ -0.79
LINC01238-201ENST00000416204 ENGP17813 658 aa10.12□□□□□ -0.79
LINC01238-201ENST00000416204 WEE1P30291 646 aa10.12□□□□□ -0.79
LINC01238-201ENST00000416204 IFNAR2P48551 515 aa10.12□□□□□ -0.79
LINC01238-201ENST00000416204 ST3GAL1Q11201 340 aa10.12□□□□□ -0.79
LINC01238-201ENST00000416204 PDGFRLQ15198 375 aa10.12□□□□□ -0.79
LINC01238-201ENST00000416204 DDR2Q16832 855 aa10.12□□□□□ -0.79
LINC01238-201ENST00000416204 SOWAHCQ53LP3 525 aaPredicted RBP10.12□□□□□ -0.79
LINC01238-201ENST00000416204 C9orf57Q5W0N0 161 aa10.12□□□□□ -0.79
LINC01238-201ENST00000416204 WSCD1Q658N2 575 aa10.12□□□□□ -0.79
LINC01238-201ENST00000416204 EFCAB13Q8IY85 973 aa10.12□□□□□ -0.79
LINC01238-201ENST00000416204 C4orf32Q8N8J7 132 aa10.12□□□□□ -0.79
LINC01238-201ENST00000416204 OXCT2Q9BYC2 517 aaPredicted RBP10.12□□□□□ -0.79
LINC01238-201ENST00000416204 SLC32A1Q9H598 525 aa10.12□□□□□ -0.79
LINC01238-201ENST00000416204 MSRB2Q9Y3D2 182 aa10.12□□□□□ -0.79
LINC01238-201ENST00000416204 RBM19Q9Y4C8 960 aaKnown RBP10.12□□□□□ -0.79
LINC01238-201ENST00000416204 K7EQS6 105 aa10.11□□□□□ -0.79
LINC01238-201ENST00000416204 PRPF40AO75400 957 aaKnown RBP10.11□□□□□ -0.79
LINC01238-201ENST00000416204 CKMP06732 381 aa10.11□□□□□ -0.79
LINC01238-201ENST00000416204 PLS3P13797 630 aa10.11□□□□□ -0.79
LINC01238-201ENST00000416204 CYP3A5P20815 502 aa10.11□□□□□ -0.79
LINC01238-201ENST00000416204 ITPKAP23677 461 aa10.11□□□□□ -0.79
LINC01238-201ENST00000416204 ACAT1P24752 427 aaKnown RBP10.11□□□□□ -0.79
LINC01238-201ENST00000416204 FXR2P51116 673 aaKnown RBP eCLIP10.11□□□□□ -0.79
LINC01238-201ENST00000416204 AMPD2Q01433 879 aa10.11□□□□□ -0.79
LINC01238-201ENST00000416204 MESP2Q0VG99 397 aa10.11□□□□□ -0.79
LINC01238-201ENST00000416204 SAFBQ15424 915 aaKnown RBP eCLIP10.11□□□□□ -0.79
LINC01238-201ENST00000416204 IL17AQ16552 155 aa10.11□□□□□ -0.79
LINC01238-201ENST00000416204 COL28A1Q2UY09 1125 aa10.11□□□□□ -0.79
LINC01238-201ENST00000416204 EML3Q32P44 896 aa10.11□□□□□ -0.79
LINC01238-201ENST00000416204 FBXO43Q4G163 708 aa10.11□□□□□ -0.79
LINC01238-201ENST00000416204 SPATA1Q5VX52 437 aa10.11□□□□□ -0.79
LINC01238-201ENST00000416204 TMEM92Q6UXU6 159 aa10.11□□□□□ -0.79
LINC01238-201ENST00000416204 PDZD3Q86UT5 571 aa10.11□□□□□ -0.79
LINC01238-201ENST00000416204 MON1AQ86VX9 555 aa10.11□□□□□ -0.79
LINC01238-201ENST00000416204 ALLCQ8N6M5 410 aa10.11□□□□□ -0.79
LINC01238-201ENST00000416204 PNPLA1Q8N8W4 532 aa10.11□□□□□ -0.79
LINC01238-201ENST00000416204 USP33Q8TEY7 942 aa10.11□□□□□ -0.79
LINC01238-201ENST00000416204 OSCP1Q8WVF1 389 aa10.11□□□□□ -0.79
LINC01238-201ENST00000416204 HMGB4Q8WW32 186 aa10.11□□□□□ -0.79
LINC01238-201ENST00000416204 MRPS31Q92665 395 aaKnown RBP10.11□□□□□ -0.79
LINC01238-201ENST00000416204 FAM84AQ96KN4 292 aa10.11□□□□□ -0.79
LINC01238-201ENST00000416204 CAMK1GQ96NX5 476 aa10.11□□□□□ -0.79
LINC01238-201ENST00000416204 FNBP1Q96RU3 617 aa10.11□□□□□ -0.79
LINC01238-201ENST00000416204 NUSAP1Q9BXS6 441 aaKnown RBP10.11□□□□□ -0.79
LINC01238-201ENST00000416204 RPF1Q9H9Y2 349 aaKnown RBP10.11□□□□□ -0.79
LINC01238-201ENST00000416204 PLEKHA5Q9HAU0 1116 aa10.11□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms