RNA–Protein interactions for RNA: ENST00000416108.5

RBM39-208, Transcript of RNA binding motif protein 39, humanhuman

TSL 4

Gene RBM39, Length 577 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-208ENST00000416108 LIMS2Q7Z4I7 341 aa8.92□□□□□ -0.98
RBM39-208ENST00000416108 PASD1Q8IV76 773 aa8.92□□□□□ -0.98
RBM39-208ENST00000416108 GLYCTKQ8IVS8 523 aa8.92□□□□□ -0.98
RBM39-208ENST00000416108 CRYBG2Q8N1P7 616 aa8.92□□□□□ -0.98
RBM39-208ENST00000416108 LNX1Q8TBB1 728 aaPredicted RBP8.92□□□□□ -0.98
RBM39-208ENST00000416108 IPO4Q8TEX9 1081 aaKnown RBP8.92□□□□□ -0.98
RBM39-208ENST00000416108 CYFIP2Q96F07 1278 aa8.92□□□□□ -0.98
RBM39-208ENST00000416108 PLVAPQ9BX97 442 aa8.92□□□□□ -0.98
RBM39-208ENST00000416108 GPR62Q9BZJ7 368 aa8.92□□□□□ -0.98
RBM39-208ENST00000416108 DPEP3Q9H4B8 488 aa8.92□□□□□ -0.98
RBM39-208ENST00000416108 ACP6Q9NPH0 428 aa8.92□□□□□ -0.98
RBM39-208ENST00000416108 FAM49BQ9NUQ9 324 aa8.92□□□□□ -0.98
RBM39-208ENST00000416108 NOCTQ9UK39 431 aaKnown RBP8.92□□□□□ -0.98
RBM39-208ENST00000416108 WDR3Q9UNX4 943 aaKnown RBP eCLIP8.92□□□□□ -0.98
RBM39-208ENST00000416108 PCDHA11Q9Y5I1 949 aa8.92□□□□□ -0.98
RBM39-208ENST00000416108 PDE4DIPQ5VU43 2346 aa8.92□□□□□ -0.98
RBM39-208ENST00000416108 GREB1Q4ZG55 1949 aa8.92□□□□□ -0.98
RBM39-208ENST00000416108 PLXNA3P51805 1871 aa8.91□□□□□ -0.98
RBM39-208ENST00000416108 MYO9BQ13459 2157 aa8.91□□□□□ -0.98
RBM39-208ENST00000416108 A0A087X0T9 212 aa8.91□□□□□ -0.98
RBM39-208ENST00000416108 HSFX4A0A1B0GTS1 333 aaPredicted RBP8.91□□□□□ -0.98
RBM39-208ENST00000416108 HSFX3A0A1B0GWH4 333 aaPredicted RBP8.91□□□□□ -0.98
RBM39-208ENST00000416108 GOLGA6L9A6NEM1 432 aa8.91□□□□□ -0.98
RBM39-208ENST00000416108 TMCO5BA8MYB1 307 aa8.91□□□□□ -0.98
RBM39-208ENST00000416108 O00370 1275 aa8.91□□□□□ -0.98
RBM39-208ENST00000416108 DDX3XO00571 662 aaKnown RBP eCLIP8.91□□□□□ -0.98
RBM39-208ENST00000416108 HCRTO43612 131 aa8.91□□□□□ -0.98
RBM39-208ENST00000416108 RTN2O75298 545 aa8.91□□□□□ -0.98
RBM39-208ENST00000416108 FGF18O76093 207 aa8.91□□□□□ -0.98
RBM39-208ENST00000416108 MICAL2O94851 1124 aa8.91□□□□□ -0.98
RBM39-208ENST00000416108 OAZ2O95190 189 aa8.91□□□□□ -0.98
RBM39-208ENST00000416108 LSM8O95777 96 aaKnown RBP8.91□□□□□ -0.98
RBM39-208ENST00000416108 CALCAP01258 141 aa8.91□□□□□ -0.98
RBM39-208ENST00000416108 H2AFZP0C0S5 128 aa8.91□□□□□ -0.98
RBM39-208ENST00000416108 FAM228BP0C875 321 aa8.91□□□□□ -0.98
RBM39-208ENST00000416108 SETSIPP0DME0 302 aa8.91□□□□□ -0.98
RBM39-208ENST00000416108 GZMAP12544 262 aa8.91□□□□□ -0.98
RBM39-208ENST00000416108 IGFBP6P24592 240 aaPredicted RBP8.91□□□□□ -0.98
RBM39-208ENST00000416108 SSTR3P32745 418 aaPredicted RBP8.91□□□□□ -0.98
RBM39-208ENST00000416108 BCAT1P54687 386 aa8.91□□□□□ -0.98
RBM39-208ENST00000416108 ARPP19P56211 112 aa8.91□□□□□ -0.98
RBM39-208ENST00000416108 SNX16P57768 344 aa8.91□□□□□ -0.98
RBM39-208ENST00000416108 CNGA2Q16280 664 aa8.91□□□□□ -0.98
RBM39-208ENST00000416108 PSMD5Q16401 504 aa8.91□□□□□ -0.98
RBM39-208ENST00000416108 NFE2Q16621 373 aaPredicted RBP8.91□□□□□ -0.98
RBM39-208ENST00000416108 CLEC16AQ2KHT3 1053 aa8.91□□□□□ -0.98
RBM39-208ENST00000416108 ARHGAP29Q52LW3 1261 aa8.91□□□□□ -0.98
RBM39-208ENST00000416108 PPP1R26Q5T8A7 1209 aaPredicted RBP8.91□□□□□ -0.98
RBM39-208ENST00000416108 NAA35Q5VZE5 725 aa8.91□□□□□ -0.98
RBM39-208ENST00000416108 H2AFVQ71UI9 128 aa8.91□□□□□ -0.98
RBM39-208ENST00000416108 DDX53Q86TM3 631 aaKnown RBP8.91□□□□□ -0.98
RBM39-208ENST00000416108 TMEM173Q86WV6 379 aaPredicted RBP8.91□□□□□ -0.98
RBM39-208ENST00000416108 SPATA2LQ8IUW3 424 aaPredicted RBP8.91□□□□□ -0.98
RBM39-208ENST00000416108 ACRBPQ8NEB7 543 aa8.91□□□□□ -0.98
RBM39-208ENST00000416108 BCL7CQ8WUZ0 217 aaPredicted RBP8.91□□□□□ -0.98
RBM39-208ENST00000416108 RIN2Q8WYP3 895 aaPredicted RBP8.91□□□□□ -0.98
RBM39-208ENST00000416108 CLP1Q92989 425 aaKnown RBP8.91□□□□□ -0.98
RBM39-208ENST00000416108 MYLPFQ96A32 169 aa8.91□□□□□ -0.98
RBM39-208ENST00000416108 TRIM11Q96F44 468 aa8.91□□□□□ -0.98
RBM39-208ENST00000416108 GDF15Q99988 308 aa8.91□□□□□ -0.98
RBM39-208ENST00000416108 DESI2Q9BSY9 194 aa8.91□□□□□ -0.98
RBM39-208ENST00000416108 TSGA10Q9BZW7 698 aa8.91□□□□□ -0.98
RBM39-208ENST00000416108 ZNF518BQ9C0D4 1074 aa8.91□□□□□ -0.98
RBM39-208ENST00000416108 MIS12Q9H081 205 aa8.91□□□□□ -0.98
RBM39-208ENST00000416108 SYNCQ9H7C4 482 aa8.91□□□□□ -0.98
RBM39-208ENST00000416108 NAGPAQ9UK23 515 aa8.91□□□□□ -0.98
RBM39-208ENST00000416108 TSPAN16Q9UKR8 245 aa8.91□□□□□ -0.98
RBM39-208ENST00000416108 PYCARDQ9ULZ3 195 aa8.91□□□□□ -0.98
RBM39-208ENST00000416108 PCDHGC3Q9UN70 934 aa8.91□□□□□ -0.98
RBM39-208ENST00000416108 NME7Q9Y5B8 376 aa8.91□□□□□ -0.98
RBM39-208ENST00000416108 PCDHA13Q9Y5I0 950 aa8.91□□□□□ -0.98
RBM39-208ENST00000416108 ATG2AQ2TAZ0 1938 aa8.91□□□□□ -0.98
RBM39-208ENST00000416108 COL4A4P53420 1690 aaPredicted RBP8.91□□□□□ -0.98
RBM39-208ENST00000416108 CEP290O15078 2479 aa8.9□□□□□ -0.98
RBM39-208ENST00000416108 BRCA2P51587 3418 aa8.9□□□□□ -0.98
RBM39-208ENST00000416108 LCHNA4D1U4 455 aa8.9□□□□□ -0.98
RBM39-208ENST00000416108 LINC01553A4QN01 128 aa8.9□□□□□ -0.98
RBM39-208ENST00000416108 GRXCR1A8MXD5 290 aa8.9□□□□□ -0.98
RBM39-208ENST00000416108 C2CD2LO14523 706 aa8.9□□□□□ -0.98
RBM39-208ENST00000416108 KRT86O43790 486 aa8.9□□□□□ -0.98
RBM39-208ENST00000416108 ATP2C2O75185 946 aa8.9□□□□□ -0.98
RBM39-208ENST00000416108 LCA5LO95447 670 aa8.9□□□□□ -0.98
RBM39-208ENST00000416108 CYP1A1P04798 512 aaPredicted RBP8.9□□□□□ -0.98
RBM39-208ENST00000416108 RB1P06400 928 aa8.9□□□□□ -0.98
RBM39-208ENST00000416108 CA3P07451 260 aa8.9□□□□□ -0.98
RBM39-208ENST00000416108 FAM200BP0CF97 657 aa8.9□□□□□ -0.98
RBM39-208ENST00000416108 CCDC130P13994 396 aa8.9□□□□□ -0.98
RBM39-208ENST00000416108 CHRNB2P17787 502 aa8.9□□□□□ -0.98
RBM39-208ENST00000416108 DNAJB2P25686 324 aa8.9□□□□□ -0.98
RBM39-208ENST00000416108 BMP8BP34820 402 aa8.9□□□□□ -0.98
RBM39-208ENST00000416108 BMPR1AP36894 532 aa8.9□□□□□ -0.98
RBM39-208ENST00000416108 VAV2P52735 878 aa8.9□□□□□ -0.98
RBM39-208ENST00000416108 NOMO3P69849 1222 aa8.9□□□□□ -0.98
RBM39-208ENST00000416108 PLCB3Q01970 1234 aa8.9□□□□□ -0.98
RBM39-208ENST00000416108 UBE3AQ05086 875 aa8.9□□□□□ -0.98
RBM39-208ENST00000416108 BST2Q10589 180 aaKnown RBP8.9□□□□□ -0.98
RBM39-208ENST00000416108 SMARCB1Q12824 385 aa8.9□□□□□ -0.98
RBM39-208ENST00000416108 KIF5AQ12840 1032 aa8.9□□□□□ -0.98
RBM39-208ENST00000416108 ASTE1Q2TB18 679 aaPredicted RBP8.9□□□□□ -0.98
RBM39-208ENST00000416108 SLC39A12Q504Y0 691 aa8.9□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms