RNA–Protein interactions for RNA: ENST00000415950.4

SCN1B-202, Transcript of sodium voltage-gated channel beta subunit 1, humanhuman

TSL 1 (best) BASIC

Gene SCN1B, Length 4,537 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1B-202ENST00000415950 CNGA2Q16280 664 aa13.47□□□□□ -0.25
SCN1B-202ENST00000415950 DUOXA2Q1HG44 320 aa13.47□□□□□ -0.25
SCN1B-202ENST00000415950 ZC3H12BQ5HYM0 836 aaKnown RBP13.47□□□□□ -0.25
SCN1B-202ENST00000415950 RC3H1Q5TC82 1133 aaKnown RBP13.47□□□□□ -0.25
SCN1B-202ENST00000415950 ACAD10Q6JQN1 1059 aa13.47□□□□□ -0.25
SCN1B-202ENST00000415950 EXOC3L1Q86VI1 746 aa13.47□□□□□ -0.25
SCN1B-202ENST00000415950 CLMNQ96JQ2 1002 aa13.47□□□□□ -0.25
SCN1B-202ENST00000415950 IL1RL2Q9HB29 575 aa13.47□□□□□ -0.25
SCN1B-202ENST00000415950 PCDHA10Q9Y5I2 948 aa13.47□□□□□ -0.25
SCN1B-202ENST00000415950 ASAP2O43150 1006 aa13.46□□□□□ -0.25
SCN1B-202ENST00000415950 LCP1P13796 627 aa13.46□□□□□ -0.25
SCN1B-202ENST00000415950 OSBPP22059 807 aa13.46□□□□□ -0.25
SCN1B-202ENST00000415950 IL10P22301 178 aa13.46□□□□□ -0.25
SCN1B-202ENST00000415950 STXBP2Q15833 593 aa13.46□□□□□ -0.25
SCN1B-202ENST00000415950 UBA3Q8TBC4 463 aa13.46□□□□□ -0.25
SCN1B-202ENST00000415950 GFAPP14136 432 aa13.46□□□□□ -0.25
SCN1B-202ENST00000415950 RFX1P22670 979 aa13.46□□□□□ -0.25
SCN1B-202ENST00000415950 HGSNATQ68CP4 663 aa13.46□□□□□ -0.25
SCN1B-202ENST00000415950 BTNL9Q6UXG8 535 aa13.46□□□□□ -0.25
SCN1B-202ENST00000415950 SV2AQ7L0J3 742 aa13.46□□□□□ -0.25
SCN1B-202ENST00000415950 IRF2BP2Q7Z5L9 587 aa13.46□□□□□ -0.25
SCN1B-202ENST00000415950 C4orf32Q8N8J7 132 aa13.46□□□□□ -0.25
SCN1B-202ENST00000415950 RNF149Q8NC42 400 aa13.46□□□□□ -0.25
SCN1B-202ENST00000415950 LNX1Q8TBB1 728 aaPredicted RBP13.46□□□□□ -0.25
SCN1B-202ENST00000415950 USP33Q8TEY7 942 aa13.46□□□□□ -0.25
SCN1B-202ENST00000415950 MAGEB18Q96M61 343 aa13.46□□□□□ -0.25
SCN1B-202ENST00000415950 RIOX1Q9H6W3 641 aa13.46□□□□□ -0.25
SCN1B-202ENST00000415950 GON4LQ3T8J9 2241 aa13.46□□□□□ -0.25
SCN1B-202ENST00000415950 ECE2O60344 883 aa13.46□□□□□ -0.26
SCN1B-202ENST00000415950 BANF1O75531 89 aa13.46□□□□□ -0.26
SCN1B-202ENST00000415950 CHKAP35790 457 aa13.46□□□□□ -0.26
SCN1B-202ENST00000415950 GNL1P36915 607 aaPredicted RBP13.46□□□□□ -0.26
SCN1B-202ENST00000415950 SLC1A1P43005 524 aa13.46□□□□□ -0.26
SCN1B-202ENST00000415950 MXD4Q14582 209 aaPredicted RBP13.46□□□□□ -0.26
SCN1B-202ENST00000415950 EML3Q32P44 896 aa13.46□□□□□ -0.26
SCN1B-202ENST00000415950 PALB2Q86YC2 1186 aa13.46□□□□□ -0.26
SCN1B-202ENST00000415950 E2F7Q96AV8 911 aa13.46□□□□□ -0.26
SCN1B-202ENST00000415950 IFT43Q96FT9 208 aa13.46□□□□□ -0.26
SCN1B-202ENST00000415950 BCAS3Q9H6U6 928 aa13.46□□□□□ -0.26
SCN1B-202ENST00000415950 PALMDQ9NP74 551 aa13.46□□□□□ -0.26
SCN1B-202ENST00000415950 NINJ2Q9NZG7 142 aa13.46□□□□□ -0.26
SCN1B-202ENST00000415950 STAP1Q9ULZ2 295 aa13.46□□□□□ -0.26
SCN1B-202ENST00000415950 VIRMAQ69YN4 1812 aaKnown RBP13.46□□□□□ -0.26
SCN1B-202ENST00000415950 MYH10P35580 1976 aa13.46□□□□□ -0.26
SCN1B-202ENST00000415950 TCRBV7S2A1N4TA0A589 114 aa13.45□□□□□ -0.26
SCN1B-202ENST00000415950 PECAM1P16284 738 aaPredicted RBP13.45□□□□□ -0.26
SCN1B-202ENST00000415950 ANXA13P27216 316 aa13.45□□□□□ -0.26
SCN1B-202ENST00000415950 ABCD1P33897 745 aa13.45□□□□□ -0.26
SCN1B-202ENST00000415950 SWT1Q5T5J6 900 aaKnown RBP13.45□□□□□ -0.26
SCN1B-202ENST00000415950 IZUMO2Q6UXV1 221 aa13.45□□□□□ -0.26
SCN1B-202ENST00000415950 RCOR2Q8IZ40 523 aa13.45□□□□□ -0.26
SCN1B-202ENST00000415950 NSUN6Q8TEA1 469 aaKnown RBP13.45□□□□□ -0.26
SCN1B-202ENST00000415950 SPOCK2Q92563 424 aa13.45□□□□□ -0.26
SCN1B-202ENST00000415950 TNFRSF25Q93038 417 aa13.45□□□□□ -0.26
SCN1B-202ENST00000415950 SGF29Q96ES7 293 aa13.45□□□□□ -0.26
SCN1B-202ENST00000415950 DCLRE1BQ9H816 532 aa13.45□□□□□ -0.26
SCN1B-202ENST00000415950 ESRRBO95718 433 aa13.45□□□□□ -0.26
SCN1B-202ENST00000415950 MTMR2Q13614 643 aa13.45□□□□□ -0.26
SCN1B-202ENST00000415950 SUPT20HL1Q3ZLR7 823 aa13.45□□□□□ -0.26
SCN1B-202ENST00000415950 DPY19L2Q6NUT2 758 aa13.45□□□□□ -0.26
SCN1B-202ENST00000415950 LRRC6Q86X45 466 aa13.45□□□□□ -0.26
SCN1B-202ENST00000415950 TAGAPQ8N103 731 aa13.45□□□□□ -0.26
SCN1B-202ENST00000415950 RBM46Q8TBY0 533 aaKnown RBP13.45□□□□□ -0.26
SCN1B-202ENST00000415950 TCP10LQ8TDR4 215 aa13.45□□□□□ -0.26
SCN1B-202ENST00000415950 C12orf65Q9H3J6 166 aaKnown RBP13.45□□□□□ -0.26
SCN1B-202ENST00000415950 POLIQ9UNA4 740 aa13.45□□□□□ -0.26
SCN1B-202ENST00000415950 USP32Q8NFA0 1604 aa13.45□□□□□ -0.26
SCN1B-202ENST00000415950 HNRNPCL2B2RXH8 293 aa13.45□□□□□ -0.26
SCN1B-202ENST00000415950 E5RI56 91 aa13.45□□□□□ -0.26
SCN1B-202ENST00000415950 ZBTB24O43167 697 aaPredicted RBP13.45□□□□□ -0.26
SCN1B-202ENST00000415950 HNRNPCL1O60812 293 aaKnown RBP13.45□□□□□ -0.26
SCN1B-202ENST00000415950 ZCCHC23Q6ZST2 131 aa13.45□□□□□ -0.26
SCN1B-202ENST00000415950 FEZF2Q8TBJ5 459 aa13.45□□□□□ -0.26
SCN1B-202ENST00000415950 ACTL9Q8TC94 416 aa13.45□□□□□ -0.26
SCN1B-202ENST00000415950 CYGBQ8WWM9 190 aa13.45□□□□□ -0.26
SCN1B-202ENST00000415950 MTMR9Q96QG7 549 aa13.45□□□□□ -0.26
SCN1B-202ENST00000415950 RTFDC1Q9BY42 306 aaPredicted RBP13.45□□□□□ -0.26
SCN1B-202ENST00000415950 ZNF302Q9NR11 478 aa13.45□□□□□ -0.26
SCN1B-202ENST00000415950 NEK2P51955 445 aa13.45□□□□□ -0.26
SCN1B-202ENST00000415950 CACNA2D1P54289 1103 aa13.45□□□□□ -0.26
SCN1B-202ENST00000415950 GEMIN4P57678 1058 aaKnown RBP13.45□□□□□ -0.26
SCN1B-202ENST00000415950 PPP4CP60510 307 aa13.45□□□□□ -0.26
SCN1B-202ENST00000415950 EFHC2Q5JST6 749 aa13.45□□□□□ -0.26
SCN1B-202ENST00000415950 PPP4R4Q6NUP7 873 aa13.45□□□□□ -0.26
SCN1B-202ENST00000415950 CDKL3Q8IVW4 592 aaPredicted RBP13.45□□□□□ -0.26
SCN1B-202ENST00000415950 SCFD2Q8WU76 684 aa13.45□□□□□ -0.26
SCN1B-202ENST00000415950 PGM2Q96G03 612 aa13.45□□□□□ -0.26
SCN1B-202ENST00000415950 PAFAH2Q99487 392 aa13.45□□□□□ -0.26
SCN1B-202ENST00000415950 KIAA1683Q9H0B3 1180 aa13.45□□□□□ -0.26
SCN1B-202ENST00000415950 CAAP1Q9H8G2 361 aa13.45□□□□□ -0.26
SCN1B-202ENST00000415950 CASS4Q9NQ75 786 aa13.45□□□□□ -0.26
SCN1B-202ENST00000415950 GPATCH2LQ9NWQ4 482 aa13.45□□□□□ -0.26
SCN1B-202ENST00000415950 KIF17Q9P2E2 1029 aa13.45□□□□□ -0.26
SCN1B-202ENST00000415950 DIP2AQ14689 1571 aa13.44□□□□□ -0.26
SCN1B-202ENST00000415950 AQP5P55064 265 aa13.44□□□□□ -0.26
SCN1B-202ENST00000415950 PPP3CAQ08209 521 aa13.44□□□□□ -0.26
SCN1B-202ENST00000415950 ZCWPW2Q504Y3 356 aa13.44□□□□□ -0.26
SCN1B-202ENST00000415950 LRP10Q7Z4F1 713 aa13.44□□□□□ -0.26
SCN1B-202ENST00000415950 C3orf20Q8ND61 904 aa13.44□□□□□ -0.26
SCN1B-202ENST00000415950 NR1H4Q96RI1 486 aaPredicted RBP13.44□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms