RNA–Protein interactions for RNA: ENST00000413582.6

RFFL-203, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

TSL 5 BASIC

Gene RFFL, Length 1,217 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-203ENST00000413582 CDR1P51861 262 aa10.35□□□□□ -0.75
RFFL-203ENST00000413582 LILRA4P59901 499 aa10.35□□□□□ -0.75
RFFL-203ENST00000413582 BFSP1Q12934 665 aa10.35□□□□□ -0.75
RFFL-203ENST00000413582 BECN1Q14457 450 aa10.35□□□□□ -0.75
RFFL-203ENST00000413582 NBR1Q14596 966 aa10.35□□□□□ -0.75
RFFL-203ENST00000413582 SAFBQ15424 915 aaKnown RBP eCLIP10.35□□□□□ -0.75
RFFL-203ENST00000413582 ENOX2Q16206 610 aaKnown RBP10.35□□□□□ -0.75
RFFL-203ENST00000413582 ARMCX5Q6P1M9 558 aa10.35□□□□□ -0.75
RFFL-203ENST00000413582 MAB21L3Q8N8X9 362 aa10.35□□□□□ -0.75
RFFL-203ENST00000413582 GIPC2Q8TF65 315 aa10.35□□□□□ -0.75
RFFL-203ENST00000413582 P2RY13Q9BPV8 354 aa10.35□□□□□ -0.75
RFFL-203ENST00000413582 NTPCRQ9BSD7 190 aaKnown RBP10.35□□□□□ -0.75
RFFL-203ENST00000413582 ZCWPW1Q9H0M4 648 aa10.35□□□□□ -0.75
RFFL-203ENST00000413582 DNM3Q9UQ16 869 aa10.35□□□□□ -0.75
RFFL-203ENST00000413582 HELZP42694 1942 aaKnown RBP10.35□□□□□ -0.75
RFFL-203ENST00000413582 NBEAQ8NFP9 2946 aa10.34□□□□□ -0.75
RFFL-203ENST00000413582 ITPR1Q14643 2758 aa10.34□□□□□ -0.75
RFFL-203ENST00000413582 KHNYNO15037 678 aaKnown RBP10.34□□□□□ -0.75
RFFL-203ENST00000413582 F11P03951 625 aa10.34□□□□□ -0.75
RFFL-203ENST00000413582 ADRB2P07550 413 aa10.34□□□□□ -0.75
RFFL-203ENST00000413582 PLS3P13797 630 aa10.34□□□□□ -0.75
RFFL-203ENST00000413582 HMGA1P17096 107 aaKnown RBP10.34□□□□□ -0.75
RFFL-203ENST00000413582 BCKDHBP21953 392 aa10.34□□□□□ -0.75
RFFL-203ENST00000413582 DDX6P26196 483 aaKnown RBP eCLIP10.34□□□□□ -0.75
RFFL-203ENST00000413582 MATR3P43243 847 aaKnown RBP eCLIP10.34□□□□□ -0.75
RFFL-203ENST00000413582 NLRP12P59046 1061 aa10.34□□□□□ -0.75
RFFL-203ENST00000413582 AMPD2Q01433 879 aa10.34□□□□□ -0.75
RFFL-203ENST00000413582 RING1Q06587 406 aa10.34□□□□□ -0.75
RFFL-203ENST00000413582 PDIA5Q14554 519 aa10.34□□□□□ -0.75
RFFL-203ENST00000413582 ZNF268Q14587 947 aaPredicted RBP10.34□□□□□ -0.75
RFFL-203ENST00000413582 PDGFRLQ15198 375 aa10.34□□□□□ -0.75
RFFL-203ENST00000413582 SPATA1Q5VX52 437 aa10.34□□□□□ -0.75
RFFL-203ENST00000413582 TXNDC8Q6A555 127 aa10.34□□□□□ -0.75
RFFL-203ENST00000413582 KIAA1211LQ6NV74 962 aa10.34□□□□□ -0.75
RFFL-203ENST00000413582 CYP2U1Q7Z449 544 aa10.34□□□□□ -0.75
RFFL-203ENST00000413582 LRRTM3Q86VH5 581 aa10.34□□□□□ -0.75
RFFL-203ENST00000413582 DEFB124Q8NES8 71 aa10.34□□□□□ -0.75
RFFL-203ENST00000413582 TSTD1Q8NFU3 115 aa10.34□□□□□ -0.75
RFFL-203ENST00000413582 TIPINQ9BVW5 301 aa10.34□□□□□ -0.75
RFFL-203ENST00000413582 FOXP1Q9H334 677 aaPredicted RBP10.34□□□□□ -0.75
RFFL-203ENST00000413582 TDP1Q9NUW8 608 aa10.34□□□□□ -0.75
RFFL-203ENST00000413582 LHX6Q9UPM6 363 aa10.34□□□□□ -0.75
RFFL-203ENST00000413582 INVSQ9Y283 1065 aa10.34□□□□□ -0.75
RFFL-203ENST00000413582 STK24Q9Y6E0 443 aa10.34□□□□□ -0.75
RFFL-203ENST00000413582 APC2O95996 2303 aa10.34□□□□□ -0.75
RFFL-203ENST00000413582 SOBPA7XYQ1 873 aa10.33□□□□□ -0.76
RFFL-203ENST00000413582 HYAL3O43820 417 aaPredicted RBP10.33□□□□□ -0.76
RFFL-203ENST00000413582 TADA3O75528 432 aa10.33□□□□□ -0.76
RFFL-203ENST00000413582 NFICP08651 508 aa10.33□□□□□ -0.76
RFFL-203ENST00000413582 HAPLN1P10915 354 aaPredicted RBP10.33□□□□□ -0.76
RFFL-203ENST00000413582 PAX3P23760 479 aa10.33□□□□□ -0.76
RFFL-203ENST00000413582 CDC25AP30304 524 aa10.33□□□□□ -0.76
RFFL-203ENST00000413582 TRAPPC10P48553 1259 aa10.33□□□□□ -0.76
RFFL-203ENST00000413582 DGKEP52429 567 aa10.33□□□□□ -0.76
RFFL-203ENST00000413582 SMTNP53814 917 aa10.33□□□□□ -0.76
RFFL-203ENST00000413582 RAD51AP2Q09MP3 1159 aa10.33□□□□□ -0.76
RFFL-203ENST00000413582 USP4Q13107 963 aa10.33□□□□□ -0.76
RFFL-203ENST00000413582 MTF1Q14872 753 aa10.33□□□□□ -0.76
RFFL-203ENST00000413582 TAF12Q16514 161 aa10.33□□□□□ -0.76
RFFL-203ENST00000413582 C9orf57Q5W0N0 161 aa10.33□□□□□ -0.76
RFFL-203ENST00000413582 JADE1Q6IE81 842 aa10.33□□□□□ -0.76
RFFL-203ENST00000413582 CC2D1AQ6P1N0 951 aaPredicted RBP10.33□□□□□ -0.76
RFFL-203ENST00000413582 LRSAM1Q6UWE0 723 aa10.33□□□□□ -0.76
RFFL-203ENST00000413582 C11orf74Q86VG3 221 aa10.33□□□□□ -0.76
RFFL-203ENST00000413582 RASSF3Q86WH2 238 aa10.33□□□□□ -0.76
RFFL-203ENST00000413582 CPA6Q8N4T0 437 aa10.33□□□□□ -0.76
RFFL-203ENST00000413582 STKLD1Q8NE28 680 aa10.33□□□□□ -0.76
RFFL-203ENST00000413582 SPPL2BQ8TCT7 592 aa10.33□□□□□ -0.76
RFFL-203ENST00000413582 C2orf15Q8WU43 125 aaKnown RBP10.33□□□□□ -0.76
RFFL-203ENST00000413582 KCNN1Q92952 543 aa10.33□□□□□ -0.76
RFFL-203ENST00000413582 CD101Q93033 1021 aa10.33□□□□□ -0.76
RFFL-203ENST00000413582 BICD1Q96G01 975 aa10.33□□□□□ -0.76
RFFL-203ENST00000413582 TSPAN18Q96SJ8 248 aa10.33□□□□□ -0.76
RFFL-203ENST00000413582 MMTAG2Q9BU76 263 aaKnown RBP10.33□□□□□ -0.76
RFFL-203ENST00000413582 RAB34Q9BZG1 259 aa10.33□□□□□ -0.76
RFFL-203ENST00000413582 TPSD1Q9BZJ3 242 aa10.33□□□□□ -0.76
RFFL-203ENST00000413582 ECT2Q9H8V3 914 aa10.33□□□□□ -0.76
RFFL-203ENST00000413582 ABI2Q9NYB9 513 aaPredicted RBP10.33□□□□□ -0.76
RFFL-203ENST00000413582 NEUROG3Q9Y4Z2 214 aa10.33□□□□□ -0.76
RFFL-203ENST00000413582 MYO18AQ92614 2054 aaKnown RBP10.33□□□□□ -0.76
RFFL-203ENST00000413582 LOC400499M0QZD8 3231 aa10.33□□□□□ -0.76
RFFL-203ENST00000413582 ANO9A1A5B4 782 aa10.32□□□□□ -0.76
RFFL-203ENST00000413582 PIRO00625 290 aa10.32□□□□□ -0.76
RFFL-203ENST00000413582 OGTO15294 1046 aa10.32□□□□□ -0.76
RFFL-203ENST00000413582 GPR15P49685 360 aa10.32□□□□□ -0.76
RFFL-203ENST00000413582 NCKAP1LP55160 1127 aa10.32□□□□□ -0.76
RFFL-203ENST00000413582 IRX4P78413 519 aa10.32□□□□□ -0.76
RFFL-203ENST00000413582 SMARCB1Q12824 385 aa10.32□□□□□ -0.76
RFFL-203ENST00000413582 PSMD2Q13200 908 aa10.32□□□□□ -0.76
RFFL-203ENST00000413582 ZNF77Q15935 545 aa10.32□□□□□ -0.76
RFFL-203ENST00000413582 KYAT1Q16773 422 aa10.32□□□□□ -0.76
RFFL-203ENST00000413582 UAP1L1Q3KQV9 507 aa10.32□□□□□ -0.76
RFFL-203ENST00000413582 USP39Q53GS9 565 aaKnown RBP10.32□□□□□ -0.76
RFFL-203ENST00000413582 KRT79Q5XKE5 535 aa10.32□□□□□ -0.76
RFFL-203ENST00000413582 MON1AQ86VX9 555 aa10.32□□□□□ -0.76
RFFL-203ENST00000413582 MDGA1Q8NFP4 955 aa10.32□□□□□ -0.76
RFFL-203ENST00000413582 USP33Q8TEY7 942 aa10.32□□□□□ -0.76
RFFL-203ENST00000413582 OSCP1Q8WVF1 389 aa10.32□□□□□ -0.76
RFFL-203ENST00000413582 MRPS31Q92665 395 aaKnown RBP10.32□□□□□ -0.76
RFFL-203ENST00000413582 EXOC4Q96A65 974 aa10.32□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms