RNA–Protein interactions for RNA: ENST00000413442.5

USP54-202, Transcript of ubiquitin specific peptidase 54, humanhuman

TSL 4

Gene USP54, Length 543 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP54-202ENST00000413442 GCNAQ96QF7 691 aa6.84□□□□□ -1.31
USP54-202ENST00000413442 MMS19Q96T76 1030 aa6.84□□□□□ -1.31
USP54-202ENST00000413442 CORO1BQ9BR76 489 aa6.84□□□□□ -1.31
USP54-202ENST00000413442 MTMR12Q9C0I1 747 aa6.84□□□□□ -1.31
USP54-202ENST00000413442 ELOVL4Q9GZR5 314 aa6.84□□□□□ -1.31
USP54-202ENST00000413442 KIF9Q9HAQ2 790 aa6.84□□□□□ -1.31
USP54-202ENST00000413442 TMEM8AQ9HCN3 771 aa6.84□□□□□ -1.31
USP54-202ENST00000413442 THG1LQ9NWX6 298 aaKnown RBP6.84□□□□□ -1.31
USP54-202ENST00000413442 SIX4Q9UIU6 781 aa6.84□□□□□ -1.31
USP54-202ENST00000413442 KIAA1257Q9ULG3 409 aa6.84□□□□□ -1.31
USP54-202ENST00000413442 L1RE1Q9UN81 338 aa6.84□□□□□ -1.31
USP54-202ENST00000413442 TIMM13Q9Y5L4 95 aaPredicted RBP6.84□□□□□ -1.31
USP54-202ENST00000413442 DOCK8Q8NF50 2099 aa6.84□□□□□ -1.31
USP54-202ENST00000413442 NOTCH4Q99466 2003 aa6.84□□□□□ -1.31
USP54-202ENST00000413442 DENND4CQ5VZ89 1909 aa6.84□□□□□ -1.32
USP54-202ENST00000413442 XIRP2A4UGR9 3374 aa6.83□□□□□ -1.32
USP54-202ENST00000413442 GOLGA6L22H0YM25 854 aa6.83□□□□□ -1.32
USP54-202ENST00000413442 RBAK-RBAKDNI3L0D1 243 aa6.83□□□□□ -1.32
USP54-202ENST00000413442 PPEF2O14830 753 aa6.83□□□□□ -1.32
USP54-202ENST00000413442 N4BP1O75113 896 aaKnown RBP6.83□□□□□ -1.32
USP54-202ENST00000413442 RTN3O95197 1032 aaPredicted RBP6.83□□□□□ -1.32
USP54-202ENST00000413442 WEE2P0C1S8 567 aa6.83□□□□□ -1.32
USP54-202ENST00000413442 TCF3P15923 654 aa6.83□□□□□ -1.32
USP54-202ENST00000413442 PSMC3P17980 439 aa6.83□□□□□ -1.32
USP54-202ENST00000413442 PTPN1P18031 435 aaKnown RBP6.83□□□□□ -1.32
USP54-202ENST00000413442 COL9A1P20849 921 aa6.83□□□□□ -1.32
USP54-202ENST00000413442 IGFBP6P24592 240 aaPredicted RBP6.83□□□□□ -1.32
USP54-202ENST00000413442 ANXA13P27216 316 aa6.83□□□□□ -1.32
USP54-202ENST00000413442 CASP1P29466 404 aa6.83□□□□□ -1.32
USP54-202ENST00000413442 AVPR2P30518 371 aa6.83□□□□□ -1.32
USP54-202ENST00000413442 PRCPP42785 496 aa6.83□□□□□ -1.32
USP54-202ENST00000413442 YWHAEP62258 255 aaKnown RBP6.83□□□□□ -1.32
USP54-202ENST00000413442 NOP14P78316 857 aaKnown RBP6.83□□□□□ -1.32
USP54-202ENST00000413442 BIRC3Q13489 604 aa6.83□□□□□ -1.32
USP54-202ENST00000413442 ZNF268Q14587 947 aaPredicted RBP6.83□□□□□ -1.32
USP54-202ENST00000413442 ZNF699Q32M78 642 aa6.83□□□□□ -1.32
USP54-202ENST00000413442 ARHGAP29Q52LW3 1261 aa6.83□□□□□ -1.32
USP54-202ENST00000413442 WDR44Q5JSH3 913 aa6.83□□□□□ -1.32
USP54-202ENST00000413442 ASTLQ6HA08 431 aaPredicted RBP6.83□□□□□ -1.32
USP54-202ENST00000413442 SV2AQ7L0J3 742 aa6.83□□□□□ -1.32
USP54-202ENST00000413442 NPAS3Q8IXF0 933 aa6.83□□□□□ -1.32
USP54-202ENST00000413442 ZC3H3Q8IXZ2 948 aaKnown RBP6.83□□□□□ -1.32
USP54-202ENST00000413442 FAM186BQ8IYM0 893 aa6.83□□□□□ -1.32
USP54-202ENST00000413442 GRAMD1CQ8IYS0 662 aa6.83□□□□□ -1.32
USP54-202ENST00000413442 ADSSL1Q8N142 457 aa6.83□□□□□ -1.32
USP54-202ENST00000413442 ZNF276Q8N554 614 aa6.83□□□□□ -1.32
USP54-202ENST00000413442 CELF5Q8N6W0 485 aaKnown RBP6.83□□□□□ -1.32
USP54-202ENST00000413442 MLKLQ8NB16 471 aa6.83□□□□□ -1.32
USP54-202ENST00000413442 ATAD1Q8NBU5 361 aa6.83□□□□□ -1.32
USP54-202ENST00000413442 GLIS3Q8NEA6 775 aa6.83□□□□□ -1.32
USP54-202ENST00000413442 PDZD8Q8NEN9 1154 aa6.83□□□□□ -1.32
USP54-202ENST00000413442 OR5B17Q8NGF7 314 aa6.83□□□□□ -1.32
USP54-202ENST00000413442 CCDC26Q8TAB7 109 aa6.83□□□□□ -1.32
USP54-202ENST00000413442 FAM200AQ8TCP9 573 aa6.83□□□□□ -1.32
USP54-202ENST00000413442 ZNF516Q92618 1163 aa6.83□□□□□ -1.32
USP54-202ENST00000413442 KHSRPQ92945 711 aaKnown RBP eCLIP6.83□□□□□ -1.32
USP54-202ENST00000413442 C8orf48Q96LL4 319 aa6.83□□□□□ -1.32
USP54-202ENST00000413442 ASB16Q96NS5 453 aa6.83□□□□□ -1.32
USP54-202ENST00000413442 MYADMQ96S97 322 aa6.83□□□□□ -1.32
USP54-202ENST00000413442 PKMYT1Q99640 499 aa6.83□□□□□ -1.32
USP54-202ENST00000413442 TRMT61BQ9BVS5 477 aaKnown RBP6.83□□□□□ -1.32
USP54-202ENST00000413442 LRRC3Q9BY71 257 aa6.83□□□□□ -1.32
USP54-202ENST00000413442 UBXN6Q9BZV1 441 aa6.83□□□□□ -1.32
USP54-202ENST00000413442 XYLT2Q9H1B5 865 aa6.83□□□□□ -1.32
USP54-202ENST00000413442 SEMA4AQ9H3S1 761 aa6.83□□□□□ -1.32
USP54-202ENST00000413442 MFSD1Q9H3U5 465 aa6.83□□□□□ -1.32
USP54-202ENST00000413442 GOLPH3LQ9H4A5 285 aa6.83□□□□□ -1.32
USP54-202ENST00000413442 TASP1Q9H6P5 420 aa6.83□□□□□ -1.32
USP54-202ENST00000413442 PNPLA8Q9NP80 782 aa6.83□□□□□ -1.32
USP54-202ENST00000413442 C11orf16Q9NQ32 467 aa6.83□□□□□ -1.32
USP54-202ENST00000413442 CEP72Q9P209 647 aa6.83□□□□□ -1.32
USP54-202ENST00000413442 KIAA1468Q9P260 1216 aa6.83□□□□□ -1.32
USP54-202ENST00000413442 GTF3C4Q9UKN8 822 aa6.83□□□□□ -1.32
USP54-202ENST00000413442 FBXL21Q9UKT6 434 aa6.83□□□□□ -1.32
USP54-202ENST00000413442 COQ4Q9Y3A0 265 aa6.83□□□□□ -1.32
USP54-202ENST00000413442 YIPF1Q9Y548 306 aa6.83□□□□□ -1.32
USP54-202ENST00000413442 NCANO14594 1321 aa6.82□□□□□ -1.32
USP54-202ENST00000413442 LRRIQ3A6PVS8 624 aaPredicted RBP6.82□□□□□ -1.32
USP54-202ENST00000413442 A8MXQ7 604 aa6.82□□□□□ -1.32
USP54-202ENST00000413442 DPYSL4O14531 572 aa6.82□□□□□ -1.32
USP54-202ENST00000413442 CHADO15335 359 aa6.82□□□□□ -1.32
USP54-202ENST00000413442 AKAP3O75969 853 aa6.82□□□□□ -1.32
USP54-202ENST00000413442 NOL4O94818 638 aa6.82□□□□□ -1.32
USP54-202ENST00000413442 ASS1P00966 412 aaKnown RBP6.82□□□□□ -1.32
USP54-202ENST00000413442 F11P03951 625 aa6.82□□□□□ -1.32
USP54-202ENST00000413442 MYL4P12829 197 aa6.82□□□□□ -1.32
USP54-202ENST00000413442 AOC1P19801 751 aa6.82□□□□□ -1.32
USP54-202ENST00000413442 TBXAS1P24557 533 aaPredicted RBP6.82□□□□□ -1.32
USP54-202ENST00000413442 GUCY2FP51841 1108 aa6.82□□□□□ -1.32
USP54-202ENST00000413442 PTPN5P54829 565 aa6.82□□□□□ -1.32
USP54-202ENST00000413442 MARSP56192 900 aaKnown RBP6.82□□□□□ -1.32
USP54-202ENST00000413442 MYL6P60660 151 aa6.82□□□□□ -1.32
USP54-202ENST00000413442 FCHO2Q0JRZ9 810 aa6.82□□□□□ -1.32
USP54-202ENST00000413442 PNOCQ13519 176 aa6.82□□□□□ -1.32
USP54-202ENST00000413442 GET4Q7L5D6 327 aaPredicted RBP6.82□□□□□ -1.32
USP54-202ENST00000413442 LRRTM3Q86VH5 581 aa6.82□□□□□ -1.32
USP54-202ENST00000413442 MON1AQ86VX9 555 aa6.82□□□□□ -1.32
USP54-202ENST00000413442 FBXL13Q8NEE6 735 aa6.82□□□□□ -1.32
USP54-202ENST00000413442 OR6B3Q8NGW1 331 aa6.82□□□□□ -1.32
USP54-202ENST00000413442 OR10T2Q8NGX3 314 aa6.82□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 112.6 ms