RNA–Protein interactions for RNA: ENST00000412507.1

TRIM56-202, Transcript of tripartite motif containing 56, humanhuman

APPRIS ALT2 TSL 1 (best)

Gene TRIM56, Length 1,129 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM56-202ENST00000412507 PSMC1P62191 440 aaKnown RBP20.17■□□□□ 0.82
TRIM56-202ENST00000412507 NCOA4Q13772 614 aa20.17■□□□□ 0.82
TRIM56-202ENST00000412507 ZACNQ401N2 412 aa20.17■□□□□ 0.82
TRIM56-202ENST00000412507 INTS8Q75QN2 995 aaKnown RBP20.17■□□□□ 0.82
TRIM56-202ENST00000412507 ITIH5Q86UX2 942 aa20.17■□□□□ 0.82
TRIM56-202ENST00000412507 SHKBP1Q8TBC3 707 aa20.17■□□□□ 0.82
TRIM56-202ENST00000412507 GIPC2Q8TF65 315 aa20.17■□□□□ 0.82
TRIM56-202ENST00000412507 EEF2KMTQ96G04 330 aa20.17■□□□□ 0.82
TRIM56-202ENST00000412507 KXD1Q9BQD3 176 aa20.17■□□□□ 0.82
TRIM56-202ENST00000412507 SYT15Q9BQS2 421 aa20.17■□□□□ 0.82
TRIM56-202ENST00000412507 ZNF334Q9HCZ1 680 aaPredicted RBP20.17■□□□□ 0.82
TRIM56-202ENST00000412507 MAN1B1Q9UKM7 699 aa20.17■□□□□ 0.82
TRIM56-202ENST00000412507 KIF26AQ9ULI4 1882 aaPredicted RBP20.17■□□□□ 0.82
TRIM56-202ENST00000412507 IKBKBO14920 756 aa20.16■□□□□ 0.82
TRIM56-202ENST00000412507 TACC1O75410 805 aa20.16■□□□□ 0.82
TRIM56-202ENST00000412507 CFHP08603 1231 aa20.16■□□□□ 0.82
TRIM56-202ENST00000412507 TRIM49P0CI25 452 aa20.16■□□□□ 0.82
TRIM56-202ENST00000412507 TRIM49CP0CI26 452 aa20.16■□□□□ 0.82
TRIM56-202ENST00000412507 SRFP11831 508 aa20.16■□□□□ 0.82
TRIM56-202ENST00000412507 KRT13P13646 458 aa20.16■□□□□ 0.82
TRIM56-202ENST00000412507 CYP2F1P24903 491 aa20.16■□□□□ 0.82
TRIM56-202ENST00000412507 GNL1P36915 607 aaPredicted RBP20.16■□□□□ 0.82
TRIM56-202ENST00000412507 GPR15P49685 360 aa20.16■□□□□ 0.82
TRIM56-202ENST00000412507 VEPH1Q14D04 833 aa20.16■□□□□ 0.82
TRIM56-202ENST00000412507 TEAD2Q15562 447 aa20.16■□□□□ 0.82
TRIM56-202ENST00000412507 ZNF699Q32M78 642 aa20.16■□□□□ 0.82
TRIM56-202ENST00000412507 SV2AQ7L0J3 742 aa20.16■□□□□ 0.82
TRIM56-202ENST00000412507 ADSSL1Q8N142 457 aa20.16■□□□□ 0.82
TRIM56-202ENST00000412507 FBXL6Q8N531 539 aa20.16■□□□□ 0.82
TRIM56-202ENST00000412507 OR6B3Q8NGW1 331 aa20.16■□□□□ 0.82
TRIM56-202ENST00000412507 GPR152Q8TDT2 470 aa20.16■□□□□ 0.82
TRIM56-202ENST00000412507 SNX25Q9H3E2 840 aa20.16■□□□□ 0.82
TRIM56-202ENST00000412507 FBXL21Q9UKT6 434 aa20.16■□□□□ 0.82
TRIM56-202ENST00000412507 CDH9Q9ULB4 789 aa20.16■□□□□ 0.82
TRIM56-202ENST00000412507 NME7Q9Y5B8 376 aa20.16■□□□□ 0.82
TRIM56-202ENST00000412507 A0A1W2PRU2 124 aa20.15■□□□□ 0.82
TRIM56-202ENST00000412507 CETN3O15182 167 aa20.15■□□□□ 0.82
TRIM56-202ENST00000412507 UBE2HP62256 183 aa20.15■□□□□ 0.82
TRIM56-202ENST00000412507 ZNF667Q5HYK9 610 aa20.15■□□□□ 0.82
TRIM56-202ENST00000412507 ANKRD40Q6AI12 368 aa20.15■□□□□ 0.82
TRIM56-202ENST00000412507 FAM171BQ6P995 826 aa20.15■□□□□ 0.82
TRIM56-202ENST00000412507 SPATA2LQ8IUW3 424 aaPredicted RBP20.15■□□□□ 0.82
TRIM56-202ENST00000412507 ZSWIM3Q96MP5 696 aa20.15■□□□□ 0.82
TRIM56-202ENST00000412507 TSG101Q99816 390 aa20.15■□□□□ 0.82
TRIM56-202ENST00000412507 GTPBP4Q9BZE4 634 aaKnown RBP20.15■□□□□ 0.82
TRIM56-202ENST00000412507 VRTNQ9H8Y1 702 aa20.15■□□□□ 0.82
TRIM56-202ENST00000412507 CRTAC1Q9NQ79 661 aa20.15■□□□□ 0.82
TRIM56-202ENST00000412507 HELZP42694 1942 aaKnown RBP20.14■□□□□ 0.81
TRIM56-202ENST00000412507 TRIM49BA6NDI0 452 aa20.14■□□□□ 0.81
TRIM56-202ENST00000412507 FAM163BP0C2L3 166 aa20.14■□□□□ 0.81
TRIM56-202ENST00000412507 GABRR2P28476 465 aa20.14■□□□□ 0.81
TRIM56-202ENST00000412507 RAP1GAPP47736 663 aa20.14■□□□□ 0.81
TRIM56-202ENST00000412507 GCLMP48507 274 aa20.14■□□□□ 0.81
TRIM56-202ENST00000412507 PMS1P54277 932 aaKnown RBP20.14■□□□□ 0.81
TRIM56-202ENST00000412507 PPP3CAQ08209 521 aa20.14■□□□□ 0.81
TRIM56-202ENST00000412507 TAF12Q16514 161 aa20.14■□□□□ 0.81
TRIM56-202ENST00000412507 DDR2Q16832 855 aa20.14■□□□□ 0.81
TRIM56-202ENST00000412507 FAM78AQ5JUQ0 283 aa20.14■□□□□ 0.81
TRIM56-202ENST00000412507 SDHAF4Q5VUM1 108 aa20.14■□□□□ 0.81
TRIM56-202ENST00000412507 TANGO2Q6ICL3 276 aa20.14■□□□□ 0.81
TRIM56-202ENST00000412507 SCARA5Q6ZMJ2 495 aa20.14■□□□□ 0.81
TRIM56-202ENST00000412507 GAREM2Q75VX8 874 aa20.14■□□□□ 0.81
TRIM56-202ENST00000412507 SUGP1Q8IWZ8 645 aaKnown RBP20.14■□□□□ 0.81
TRIM56-202ENST00000412507 STKLD1Q8NE28 680 aa20.14■□□□□ 0.81
TRIM56-202ENST00000412507 PLA2G2FQ9BZM2 168 aa20.14■□□□□ 0.81
TRIM56-202ENST00000412507 SLITRK6Q9H5Y7 841 aa20.14■□□□□ 0.81
TRIM56-202ENST00000412507 SMYD3Q9H7B4 428 aa20.14■□□□□ 0.81
TRIM56-202ENST00000412507 MMRN2Q9H8L6 949 aa20.14■□□□□ 0.81
TRIM56-202ENST00000412507 ABCB6Q9NP58 842 aa20.14■□□□□ 0.81
TRIM56-202ENST00000412507 HCN4Q9Y3Q4 1203 aa20.14■□□□□ 0.81
TRIM56-202ENST00000412507 MUC6Q6W4X9 2439 aa20.13■□□□□ 0.81
TRIM56-202ENST00000412507 BIN1O00499 593 aa20.13■□□□□ 0.81
TRIM56-202ENST00000412507 ECI2O75521 394 aa20.13■□□□□ 0.81
TRIM56-202ENST00000412507 HLA-DRAP01903 254 aa20.13■□□□□ 0.81
TRIM56-202ENST00000412507 CD44P16070 742 aaKnown RBP20.13■□□□□ 0.81
TRIM56-202ENST00000412507 PIK3CAP42336 1068 aa20.13■□□□□ 0.81
TRIM56-202ENST00000412507 CDH8P55286 799 aa20.13■□□□□ 0.81
TRIM56-202ENST00000412507 GPC5P78333 572 aa20.13■□□□□ 0.81
TRIM56-202ENST00000412507 STIM1Q13586 685 aa20.13■□□□□ 0.81
TRIM56-202ENST00000412507 SGSM1Q2NKQ1 1148 aa20.13■□□□□ 0.81
TRIM56-202ENST00000412507 CFAP221Q4G0U5 840 aa20.13■□□□□ 0.81
TRIM56-202ENST00000412507 STXBP5Q5T5C0 1151 aa20.13■□□□□ 0.81
TRIM56-202ENST00000412507 C4orf50Q6ZRC1 276 aa20.13■□□□□ 0.81
TRIM56-202ENST00000412507 MYLPFQ96A32 169 aa20.13■□□□□ 0.81
TRIM56-202ENST00000412507 FUBP3Q96I24 572 aaKnown RBP eCLIP20.13■□□□□ 0.81
TRIM56-202ENST00000412507 MKNK1Q9BUB5 465 aa20.13■□□□□ 0.81
TRIM56-202ENST00000412507 ATXN3LQ9H3M9 355 aa20.13■□□□□ 0.81
TRIM56-202ENST00000412507 DPEP3Q9H4B8 488 aa20.13■□□□□ 0.81
TRIM56-202ENST00000412507 MAGEC2Q9UBF1 373 aaPredicted RBP20.13■□□□□ 0.81
TRIM56-202ENST00000412507 WNT16Q9UBV4 365 aa20.13■□□□□ 0.81
TRIM56-202ENST00000412507 CA14Q9ULX7 337 aa20.13■□□□□ 0.81
TRIM56-202ENST00000412507 COL4A3Q01955 1670 aa20.13■□□□□ 0.81
TRIM56-202ENST00000412507 A8MXQ7 604 aa20.12■□□□□ 0.81
TRIM56-202ENST00000412507 FGF19O95750 216 aa20.12■□□□□ 0.81
TRIM56-202ENST00000412507 EPB41P11171 864 aaKnown RBP20.12■□□□□ 0.81
TRIM56-202ENST00000412507 BMP6P22004 513 aa20.12■□□□□ 0.81
TRIM56-202ENST00000412507 FCARP24071 287 aa20.12■□□□□ 0.81
TRIM56-202ENST00000412507 CCNE1P24864 410 aa20.12■□□□□ 0.81
TRIM56-202ENST00000412507 VCPP55072 806 aaKnown RBP20.12■□□□□ 0.81
TRIM56-202ENST00000412507 RPL10AP62906 217 aaKnown RBP20.12■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms