RNA–Protein interactions for RNA: ENST00000411956.1

AP001056.1-201, humanhuman

TSL 3 BASIC

Gene AP001056.1, Length 821 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP001056.1-201ENST00000411956 AKR1B15C9JRZ8 316 aaPredicted RBP16.78■□□□□ 0.28
AP001056.1-201ENST00000411956 TEX28O15482 410 aa16.78■□□□□ 0.28
AP001056.1-201ENST00000411956 CNPP09543 421 aaKnown RBP16.78■□□□□ 0.28
AP001056.1-201ENST00000411956 CPB1P15086 417 aa16.78■□□□□ 0.28
AP001056.1-201ENST00000411956 FERP16591 822 aa16.78■□□□□ 0.28
AP001056.1-201ENST00000411956 PTPN1P18031 435 aaKnown RBP16.78■□□□□ 0.28
AP001056.1-201ENST00000411956 NDUFV1P49821 464 aa16.78■□□□□ 0.28
AP001056.1-201ENST00000411956 ADKP55263 362 aaKnown RBP16.78■□□□□ 0.28
AP001056.1-201ENST00000411956 ROR1Q01973 937 aa16.78■□□□□ 0.28
AP001056.1-201ENST00000411956 ARID5BQ14865 1188 aa16.78■□□□□ 0.28
AP001056.1-201ENST00000411956 ASIC2Q16515 512 aa16.78■□□□□ 0.28
AP001056.1-201ENST00000411956 MDH1BQ5I0G3 518 aa16.78■□□□□ 0.28
AP001056.1-201ENST00000411956 ZNF697Q5TEC3 545 aa16.78■□□□□ 0.28
AP001056.1-201ENST00000411956 SFMBT2Q5VUG0 894 aa16.78■□□□□ 0.28
AP001056.1-201ENST00000411956 FAM171BQ6P995 826 aa16.78■□□□□ 0.28
AP001056.1-201ENST00000411956 LRRTM3Q86VH5 581 aa16.78■□□□□ 0.28
AP001056.1-201ENST00000411956 SLC47A2Q86VL8 602 aa16.78■□□□□ 0.28
AP001056.1-201ENST00000411956 CNGA4Q8IV77 575 aa16.78■□□□□ 0.28
AP001056.1-201ENST00000411956 FMNL3Q8IVF7 1028 aa16.78■□□□□ 0.28
AP001056.1-201ENST00000411956 GLYCTKQ8IVS8 523 aa16.78■□□□□ 0.28
AP001056.1-201ENST00000411956 DCP1BQ8IZD4 617 aaKnown RBP16.78■□□□□ 0.28
AP001056.1-201ENST00000411956 MRPL43Q8N983 215 aaKnown RBP16.78■□□□□ 0.28
AP001056.1-201ENST00000411956 ANP32BQ92688 251 aaKnown RBP16.78■□□□□ 0.28
AP001056.1-201ENST00000411956 MYLPFQ96A32 169 aa16.78■□□□□ 0.28
AP001056.1-201ENST00000411956 DNAI2Q9GZS0 605 aa16.78■□□□□ 0.28
AP001056.1-201ENST00000411956 NUCKS1Q9H1E3 243 aaKnown RBP16.78■□□□□ 0.28
AP001056.1-201ENST00000411956 ABHD10Q9NUJ1 306 aa16.78■□□□□ 0.28
AP001056.1-201ENST00000411956 TMLHEQ9NVH6 421 aa16.78■□□□□ 0.28
AP001056.1-201ENST00000411956 IMPACTQ9P2X3 320 aa16.78■□□□□ 0.28
AP001056.1-201ENST00000411956 WDR27A2RRH5 827 aa16.77■□□□□ 0.28
AP001056.1-201ENST00000411956 VDRP11473 427 aa16.77■□□□□ 0.28
AP001056.1-201ENST00000411956 CD19P15391 556 aa16.77■□□□□ 0.28
AP001056.1-201ENST00000411956 BRD2P25440 801 aaKnown RBP16.77■□□□□ 0.28
AP001056.1-201ENST00000411956 GNA15P30679 374 aa16.77■□□□□ 0.28
AP001056.1-201ENST00000411956 OR1D2P34982 312 aa16.77■□□□□ 0.28
AP001056.1-201ENST00000411956 ARPP19P56211 112 aa16.77■□□□□ 0.28
AP001056.1-201ENST00000411956 PTPROQ16827 1216 aa16.77■□□□□ 0.28
AP001056.1-201ENST00000411956 SLC39A12Q504Y0 691 aa16.77■□□□□ 0.28
AP001056.1-201ENST00000411956 C12orf29Q8N999 325 aa16.77■□□□□ 0.28
AP001056.1-201ENST00000411956 TC2NQ8N9U0 490 aa16.77■□□□□ 0.28
AP001056.1-201ENST00000411956 MYCBPAPQ8TBZ2 947 aa16.77■□□□□ 0.28
AP001056.1-201ENST00000411956 MICAL1Q8TDZ2 1067 aa16.77■□□□□ 0.28
AP001056.1-201ENST00000411956 HEXIM2Q96MH2 286 aaKnown RBP16.77■□□□□ 0.28
AP001056.1-201ENST00000411956 KLHL5Q96PQ7 755 aa16.77■□□□□ 0.28
AP001056.1-201ENST00000411956 DNAJC7Q99615 494 aa16.77■□□□□ 0.28
AP001056.1-201ENST00000411956 ZSWIM1Q9BR11 485 aa16.77■□□□□ 0.28
AP001056.1-201ENST00000411956 EMILIN2Q9BXX0 1053 aa16.77■□□□□ 0.28
AP001056.1-201ENST00000411956 FAM49BQ9NUQ9 324 aa16.77■□□□□ 0.28
AP001056.1-201ENST00000411956 AIPL1Q9NZN9 384 aa16.77■□□□□ 0.28
AP001056.1-201ENST00000411956 GTF3C4Q9UKN8 822 aa16.77■□□□□ 0.28
AP001056.1-201ENST00000411956 MTMR11A4FU01 709 aa16.76■□□□□ 0.27
AP001056.1-201ENST00000411956 CCDC130P13994 396 aa16.76■□□□□ 0.27
AP001056.1-201ENST00000411956 CYP11B1P15538 503 aa16.76■□□□□ 0.27
AP001056.1-201ENST00000411956 PDE6CP51160 858 aa16.76■□□□□ 0.27
AP001056.1-201ENST00000411956 ARID5AQ03989 594 aa16.76■□□□□ 0.27
AP001056.1-201ENST00000411956 PTK2Q05397 1052 aa16.76■□□□□ 0.27
AP001056.1-201ENST00000411956 GPR17Q13304 367 aa16.76■□□□□ 0.27
AP001056.1-201ENST00000411956 RAB33AQ14088 237 aa16.76■□□□□ 0.27
AP001056.1-201ENST00000411956 GRIN2CQ14957 1233 aa16.76■□□□□ 0.27
AP001056.1-201ENST00000411956 SGO2Q562F6 1265 aa16.76■□□□□ 0.27
AP001056.1-201ENST00000411956 ARHGAP17Q68EM7 881 aa16.76■□□□□ 0.27
AP001056.1-201ENST00000411956 RNF19BQ6ZMZ0 732 aa16.76■□□□□ 0.27
AP001056.1-201ENST00000411956 IRF2BP2Q7Z5L9 587 aa16.76■□□□□ 0.27
AP001056.1-201ENST00000411956 ADGRD2Q7Z7M1 963 aa16.76■□□□□ 0.27
AP001056.1-201ENST00000411956 EPS8L1Q8TE68 723 aa16.76■□□□□ 0.27
AP001056.1-201ENST00000411956 TFAP2BQ92481 460 aa16.76■□□□□ 0.27
AP001056.1-201ENST00000411956 SYN2Q92777 582 aaPredicted RBP16.76■□□□□ 0.27
AP001056.1-201ENST00000411956 MRPL38Q96DV4 380 aaKnown RBP16.76■□□□□ 0.27
AP001056.1-201ENST00000411956 PCED1BQ96HM7 432 aa16.76■□□□□ 0.27
AP001056.1-201ENST00000411956 PDLIM2Q96JY6 352 aa16.76■□□□□ 0.27
AP001056.1-201ENST00000411956 PRDM12Q9H4Q4 367 aa16.76■□□□□ 0.27
AP001056.1-201ENST00000411956 KIAA1257Q9ULG3 409 aa16.76■□□□□ 0.27
AP001056.1-201ENST00000411956 CHD7Q9P2D1 2997 aa16.75■□□□□ 0.27
AP001056.1-201ENST00000411956 GOLGA6L6A8MZA4 724 aa16.75■□□□□ 0.27
AP001056.1-201ENST00000411956 O00370 1275 aa16.75■□□□□ 0.27
AP001056.1-201ENST00000411956 THAP12O43422 761 aa16.75■□□□□ 0.27
AP001056.1-201ENST00000411956 VNN2O95498 520 aa16.75■□□□□ 0.27
AP001056.1-201ENST00000411956 ADH1AP07327 375 aa16.75■□□□□ 0.27
AP001056.1-201ENST00000411956 CCDC172P0C7W6 258 aa16.75■□□□□ 0.27
AP001056.1-201ENST00000411956 HNRNPH3P31942 346 aaKnown RBP16.75■□□□□ 0.27
AP001056.1-201ENST00000411956 PRKCIP41743 596 aa16.75■□□□□ 0.27
AP001056.1-201ENST00000411956 CDR1P51861 262 aa16.75■□□□□ 0.27
AP001056.1-201ENST00000411956 BPIFB4P59827 614 aa16.75■□□□□ 0.27
AP001056.1-201ENST00000411956 CYP27A1Q02318 531 aa16.75■□□□□ 0.27
AP001056.1-201ENST00000411956 MAPRE1Q15691 268 aaKnown RBP16.75■□□□□ 0.27
AP001056.1-201ENST00000411956 NFE2Q16621 373 aaPredicted RBP16.75■□□□□ 0.27
AP001056.1-201ENST00000411956 HABP4Q5JVS0 413 aaKnown RBP16.75■□□□□ 0.27
AP001056.1-201ENST00000411956 PPP1R26Q5T8A7 1209 aaPredicted RBP16.75■□□□□ 0.27
AP001056.1-201ENST00000411956 C4orf50Q6ZRC1 276 aa16.75■□□□□ 0.27
AP001056.1-201ENST00000411956 NOP9Q86U38 636 aaKnown RBP16.75■□□□□ 0.27
AP001056.1-201ENST00000411956 FAM35AQ86V20 835 aa16.75■□□□□ 0.27
AP001056.1-201ENST00000411956 FUKQ8N0W3 1084 aa16.75■□□□□ 0.27
AP001056.1-201ENST00000411956 OR8K1Q8NGG5 319 aa16.75■□□□□ 0.27
AP001056.1-201ENST00000411956 SLC2A14Q8TDB8 520 aa16.75■□□□□ 0.27
AP001056.1-201ENST00000411956 CYFIP2Q96F07 1278 aa16.75■□□□□ 0.27
AP001056.1-201ENST00000411956 PGLYRP2Q96PD5 576 aa16.75■□□□□ 0.27
AP001056.1-201ENST00000411956 B3GNT5Q9BYG0 378 aa16.75■□□□□ 0.27
AP001056.1-201ENST00000411956 NOCTQ9UK39 431 aaKnown RBP16.75■□□□□ 0.27
AP001056.1-201ENST00000411956 WDR3Q9UNX4 943 aaKnown RBP eCLIP16.75■□□□□ 0.27
AP001056.1-201ENST00000411956 PLXNA3P51805 1871 aa16.75■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms