RNA–Protein interactions for RNA: ENST00000411482.1

LMO2-203, Transcript of LIM domain only 2, humanhuman

TSL 1 (best)

Gene LMO2, Length 1,519 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO2-203ENST00000411482 SBDSQ9Y3A5 250 aaKnown RBP eCLIP20.43■□□□□ 0.86
LMO2-203ENST00000411482 TLR3O15455 904 aaKnown RBP20.42■□□□□ 0.86
LMO2-203ENST00000411482 NPTXRO95502 500 aa20.42■□□□□ 0.86
LMO2-203ENST00000411482 CD4P01730 458 aa20.42■□□□□ 0.86
LMO2-203ENST00000411482 FGFR4P22455 802 aa20.42■□□□□ 0.86
LMO2-203ENST00000411482 C2CD6Q53TS8 623 aa20.42■□□□□ 0.86
LMO2-203ENST00000411482 XKR4Q5GH76 650 aa20.42■□□□□ 0.86
LMO2-203ENST00000411482 RHOT1Q8IXI2 618 aa20.42■□□□□ 0.86
LMO2-203ENST00000411482 FAM126BQ8IXS8 530 aa20.42■□□□□ 0.86
LMO2-203ENST00000411482 KATNAL2Q8IYT4 538 aa20.42■□□□□ 0.86
LMO2-203ENST00000411482 NIPA2Q8N8Q9 360 aa20.42■□□□□ 0.86
LMO2-203ENST00000411482 TSEN2Q8NCE0 465 aaKnown RBP20.42■□□□□ 0.86
LMO2-203ENST00000411482 C3orf20Q8ND61 904 aa20.42■□□□□ 0.86
LMO2-203ENST00000411482 DPF3Q92784 378 aa20.42■□□□□ 0.86
LMO2-203ENST00000411482 TMEM176AQ96HP8 235 aa20.42■□□□□ 0.86
LMO2-203ENST00000411482 GDAP1L1Q96MZ0 367 aa20.42■□□□□ 0.86
LMO2-203ENST00000411482 SH3GL2Q99962 352 aa20.42■□□□□ 0.86
LMO2-203ENST00000411482 ERP44Q9BS26 406 aa20.42■□□□□ 0.86
LMO2-203ENST00000411482 ELOVL4Q9GZR5 314 aa20.42■□□□□ 0.86
LMO2-203ENST00000411482 SMYD3Q9H7B4 428 aa20.42■□□□□ 0.86
LMO2-203ENST00000411482 CNTN3Q9P232 1028 aa20.42■□□□□ 0.86
LMO2-203ENST00000411482 STRIP2Q9ULQ0 834 aa20.42■□□□□ 0.86
LMO2-203ENST00000411482 BARX2Q9UMQ3 279 aaPredicted RBP20.42■□□□□ 0.86
LMO2-203ENST00000411482 ATP11BQ9Y2G3 1177 aa20.42■□□□□ 0.86
LMO2-203ENST00000411482 UTP11Q9Y3A2 253 aaKnown RBP20.42■□□□□ 0.86
LMO2-203ENST00000411482 CEP83Q9Y592 693 aa20.42■□□□□ 0.86
LMO2-203ENST00000411482 RARAP10276 462 aa20.41■□□□□ 0.86
LMO2-203ENST00000411482 VDRP11473 427 aa20.41■□□□□ 0.86
LMO2-203ENST00000411482 GNAT1P11488 350 aa20.41■□□□□ 0.86
LMO2-203ENST00000411482 FNTAP49354 379 aa20.41■□□□□ 0.86
LMO2-203ENST00000411482 CRYBB1P53674 252 aaPredicted RBP20.41■□□□□ 0.86
LMO2-203ENST00000411482 CDH8P55286 799 aa20.41■□□□□ 0.86
LMO2-203ENST00000411482 DR1Q01658 176 aa20.41■□□□□ 0.86
LMO2-203ENST00000411482 PTPN11Q06124 597 aaPredicted RBP20.41■□□□□ 0.86
LMO2-203ENST00000411482 FAAP100Q0VG06 881 aa20.41■□□□□ 0.86
LMO2-203ENST00000411482 CNGA2Q16280 664 aa20.41■□□□□ 0.86
LMO2-203ENST00000411482 ZNF394Q53GI3 561 aa20.41■□□□□ 0.86
LMO2-203ENST00000411482 HSP90B2PQ58FF3 399 aa20.41■□□□□ 0.86
LMO2-203ENST00000411482 DENND1BQ6P3S1 775 aa20.41■□□□□ 0.86
LMO2-203ENST00000411482 SESTD1Q86VW0 696 aa20.41■□□□□ 0.86
LMO2-203ENST00000411482 ERICH1Q86X53 443 aa20.41■□□□□ 0.86
LMO2-203ENST00000411482 KIF12Q96FN5 646 aa20.41■□□□□ 0.86
LMO2-203ENST00000411482 OSMRQ99650 979 aa20.41■□□□□ 0.86
LMO2-203ENST00000411482 SEZ6LQ9BYH1 1024 aa20.41■□□□□ 0.86
LMO2-203ENST00000411482 C17orf102A2RUQ5 167 aa20.4■□□□□ 0.86
LMO2-203ENST00000411482 PODXLO00592 558 aa20.4■□□□□ 0.86
LMO2-203ENST00000411482 TREHO43280 583 aa20.4■□□□□ 0.86
LMO2-203ENST00000411482 RAP1GAPP47736 663 aa20.4■□□□□ 0.86
LMO2-203ENST00000411482 LRRC52Q8N7C0 313 aa20.4■□□□□ 0.86
LMO2-203ENST00000411482 DNAJB3Q8WWF6 145 aa20.4■□□□□ 0.86
LMO2-203ENST00000411482 TWNKQ96RR1 684 aa20.4■□□□□ 0.86
LMO2-203ENST00000411482 EIF2AQ9BY44 585 aaKnown RBP20.4■□□□□ 0.86
LMO2-203ENST00000411482 CELF4Q9BZC1 486 aaKnown RBP20.4■□□□□ 0.86
LMO2-203ENST00000411482 PCDH10Q9P2E7 1040 aa20.4■□□□□ 0.86
LMO2-203ENST00000411482 GOLGA6BA6NDN3 693 aa20.39■□□□□ 0.85
LMO2-203ENST00000411482 PQBP1O60828 265 aaKnown RBP20.39■□□□□ 0.85
LMO2-203ENST00000411482 SSTR3P32745 418 aaPredicted RBP20.39■□□□□ 0.85
LMO2-203ENST00000411482 COILP38432 576 aaPredicted RBP20.39■□□□□ 0.85
LMO2-203ENST00000411482 GABRB2P47870 512 aa20.39■□□□□ 0.85
LMO2-203ENST00000411482 TMEM62Q0P6H9 643 aa20.39■□□□□ 0.85
LMO2-203ENST00000411482 TTC27Q6P3X3 843 aa20.39■□□□□ 0.85
LMO2-203ENST00000411482 PHLDB2Q86SQ0 1253 aa20.39■□□□□ 0.85
LMO2-203ENST00000411482 JAMLQ86YT9 394 aa20.39■□□□□ 0.85
LMO2-203ENST00000411482 TMEM130Q8N3G9 435 aa20.39■□□□□ 0.85
LMO2-203ENST00000411482 EXD1Q8NHP7 514 aa20.39■□□□□ 0.85
LMO2-203ENST00000411482 FNIP1Q8TF40 1166 aa20.39■□□□□ 0.85
LMO2-203ENST00000411482 MAGOHBQ96A72 148 aaKnown RBP20.39■□□□□ 0.85
LMO2-203ENST00000411482 ZMAT2Q96NC0 199 aaKnown RBP20.39■□□□□ 0.85
LMO2-203ENST00000411482 TRPV6Q9H1D0 765 aa20.39■□□□□ 0.85
LMO2-203ENST00000411482 SNTG2Q9NY99 539 aa20.39■□□□□ 0.85
LMO2-203ENST00000411482 WDR35Q9P2L0 1181 aa20.39■□□□□ 0.85
LMO2-203ENST00000411482 WDR3Q9UNX4 943 aaKnown RBP eCLIP20.39■□□□□ 0.85
LMO2-203ENST00000411482 TCRBV7S2A1N4TA0A589 114 aa20.38■□□□□ 0.85
LMO2-203ENST00000411482 SIGLEC16A6NMB1 481 aa20.38■□□□□ 0.85
LMO2-203ENST00000411482 O00370 1275 aa20.38■□□□□ 0.85
LMO2-203ENST00000411482 DAPK3O43293 454 aa20.38■□□□□ 0.85
LMO2-203ENST00000411482 GBP1P32455 592 aa20.38■□□□□ 0.85
LMO2-203ENST00000411482 GGCXP38435 758 aa20.38■□□□□ 0.85
LMO2-203ENST00000411482 GUCY2FP51841 1108 aa20.38■□□□□ 0.85
LMO2-203ENST00000411482 YARSP54577 528 aaKnown RBP20.38■□□□□ 0.85
LMO2-203ENST00000411482 TAS2R40P59535 323 aa20.38■□□□□ 0.85
LMO2-203ENST00000411482 RPL7AP62424 266 aaKnown RBP20.38■□□□□ 0.85
LMO2-203ENST00000411482 ZNF252P-AS1Q0IIN9 211 aa20.38■□□□□ 0.85
LMO2-203ENST00000411482 MYO1EQ12965 1108 aa20.38■□□□□ 0.85
LMO2-203ENST00000411482 PIGHQ14442 188 aaPredicted RBP20.38■□□□□ 0.85
LMO2-203ENST00000411482 ZNF268Q14587 947 aaPredicted RBP20.38■□□□□ 0.85
LMO2-203ENST00000411482 PTPN20Q4JDL3 420 aa20.38■□□□□ 0.85
LMO2-203ENST00000411482 UBXN11Q5T124 520 aa20.38■□□□□ 0.85
LMO2-203ENST00000411482 GDF6Q6KF10 455 aaPredicted RBP20.38■□□□□ 0.85
LMO2-203ENST00000411482 TAF2Q6P1X5 1199 aa20.38■□□□□ 0.85
LMO2-203ENST00000411482 DNAJC24Q6P3W2 148 aa20.38■□□□□ 0.85
LMO2-203ENST00000411482 C7orf61Q8IZ16 206 aa20.38■□□□□ 0.85
LMO2-203ENST00000411482 TMEM40Q8WWA1 233 aa20.38■□□□□ 0.85
LMO2-203ENST00000411482 PLEKHA4Q9H4M7 779 aa20.38■□□□□ 0.85
LMO2-203ENST00000411482 TRMT13Q9NUP7 481 aaKnown RBP20.38■□□□□ 0.85
LMO2-203ENST00000411482 CYTH4Q9UIA0 394 aa20.38■□□□□ 0.85
LMO2-203ENST00000411482 TRIM43BA6NCK2 446 aa20.37■□□□□ 0.85
LMO2-203ENST00000411482 KCNE1P15382 129 aa20.37■□□□□ 0.85
LMO2-203ENST00000411482 CD19P15391 556 aa20.37■□□□□ 0.85
LMO2-203ENST00000411482 KLF1Q13351 362 aaPredicted RBP20.37■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms