RNA–Protein interactions for RNA: ENST00000410080.5

PRPF40A-202, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PRPF40A, Length 8,048 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-202ENST00000410080 SENP7Q9BQF6 1050 aa11.7□□□□□ -0.54
PRPF40A-202ENST00000410080 TRMT6Q9UJA5 497 aaKnown RBP11.7□□□□□ -0.54
PRPF40A-202ENST00000410080 PFASO15067 1338 aa11.7□□□□□ -0.54
PRPF40A-202ENST00000410080 ZBTB39O15060 712 aa11.7□□□□□ -0.54
PRPF40A-202ENST00000410080 CEP55Q53EZ4 464 aa11.7□□□□□ -0.54
PRPF40A-202ENST00000410080 VSTM4Q8IW00 320 aa11.7□□□□□ -0.54
PRPF40A-202ENST00000410080 RSPH9Q9H1X1 276 aaPredicted RBP11.7□□□□□ -0.54
PRPF40A-202ENST00000410080 PCMTD2Q9NV79 361 aa11.7□□□□□ -0.54
PRPF40A-202ENST00000410080 F5H5T6 163 aa11.69□□□□□ -0.54
PRPF40A-202ENST00000410080 RGS5O15539 181 aa11.69□□□□□ -0.54
PRPF40A-202ENST00000410080 ATF7IP2Q5U623 682 aa11.69□□□□□ -0.54
PRPF40A-202ENST00000410080 PLA2G4FQ68DD2 849 aa11.69□□□□□ -0.54
PRPF40A-202ENST00000410080 ERAP1Q9NZ08 941 aa11.69□□□□□ -0.54
PRPF40A-202ENST00000410080 HERC5Q9UII4 1024 aaKnown RBP11.69□□□□□ -0.54
PRPF40A-202ENST00000410080 LNPEPQ9UIQ6 1025 aa11.69□□□□□ -0.54
PRPF40A-202ENST00000410080 COQ6Q9Y2Z9 468 aa11.69□□□□□ -0.54
PRPF40A-202ENST00000410080 KLHL18O94889 574 aa11.69□□□□□ -0.54
PRPF40A-202ENST00000410080 NOS3P29474 1203 aa11.69□□□□□ -0.54
PRPF40A-202ENST00000410080 ARFIP2P53365 341 aa11.69□□□□□ -0.54
PRPF40A-202ENST00000410080 PRKAA1Q13131 559 aa11.69□□□□□ -0.54
PRPF40A-202ENST00000410080 TAF13Q15543 124 aa11.69□□□□□ -0.54
PRPF40A-202ENST00000410080 TRAF7Q6Q0C0 670 aa11.69□□□□□ -0.54
PRPF40A-202ENST00000410080 DCP1BQ8IZD4 617 aaKnown RBP11.69□□□□□ -0.54
PRPF40A-202ENST00000410080 ATP6V1HQ9UI12 483 aa11.69□□□□□ -0.54
PRPF40A-202ENST00000410080 ABCC3O15438 1527 aa11.69□□□□□ -0.54
PRPF40A-202ENST00000410080 LRRC14BA6NHZ5 514 aa11.69□□□□□ -0.54
PRPF40A-202ENST00000410080 NCK2O43639 380 aa11.69□□□□□ -0.54
PRPF40A-202ENST00000410080 PLOD1Q02809 727 aaPredicted RBP11.69□□□□□ -0.54
PRPF40A-202ENST00000410080 VPS37AQ8NEZ2 397 aa11.69□□□□□ -0.54
PRPF40A-202ENST00000410080 MRPS31Q92665 395 aaKnown RBP11.69□□□□□ -0.54
PRPF40A-202ENST00000410080 KIF2CQ99661 725 aa11.69□□□□□ -0.54
PRPF40A-202ENST00000410080 ECSITQ9BQ95 431 aa11.69□□□□□ -0.54
PRPF40A-202ENST00000410080 MIR1-1HGQ9H1L0 117 aa11.69□□□□□ -0.54
PRPF40A-202ENST00000410080 NMRK1Q9NWW6 199 aa11.69□□□□□ -0.54
PRPF40A-202ENST00000410080 RNF14Q9UBS8 474 aa11.69□□□□□ -0.54
PRPF40A-202ENST00000410080 IFRD1O00458 451 aaPredicted RBP11.69□□□□□ -0.54
PRPF40A-202ENST00000410080 SERPINB3P29508 390 aa11.69□□□□□ -0.54
PRPF40A-202ENST00000410080 MARSP56192 900 aaKnown RBP11.69□□□□□ -0.54
PRPF40A-202ENST00000410080 AMPD2Q01433 879 aa11.69□□□□□ -0.54
PRPF40A-202ENST00000410080 P3H1Q32P28 736 aa11.69□□□□□ -0.54
PRPF40A-202ENST00000410080 ZSCAN2Q7Z7L9 614 aaPredicted RBP11.69□□□□□ -0.54
PRPF40A-202ENST00000410080 ZNRF3Q9ULT6 936 aa11.69□□□□□ -0.54
PRPF40A-202ENST00000410080 WEE2P0C1S8 567 aa11.69□□□□□ -0.54
PRPF40A-202ENST00000410080 LIFRP42702 1097 aa11.69□□□□□ -0.54
PRPF40A-202ENST00000410080 VSNL1P62760 191 aa11.69□□□□□ -0.54
PRPF40A-202ENST00000410080 SLC44A4Q53GD3 710 aa11.69□□□□□ -0.54
PRPF40A-202ENST00000410080 ARL6IP4Q66PJ3 421 aaKnown RBP11.69□□□□□ -0.54
PRPF40A-202ENST00000410080 UXS1Q8NBZ7 420 aa11.69□□□□□ -0.54
PRPF40A-202ENST00000410080 E9PBE3 544 aa11.69□□□□□ -0.54
PRPF40A-202ENST00000410080 B3GAT3O94766 335 aa11.69□□□□□ -0.54
PRPF40A-202ENST00000410080 ITGAXP20702 1163 aa11.69□□□□□ -0.54
PRPF40A-202ENST00000410080 SCP2P22307 547 aa11.69□□□□□ -0.54
PRPF40A-202ENST00000410080 BAATQ14032 418 aaPredicted RBP11.69□□□□□ -0.54
PRPF40A-202ENST00000410080 HDDC2Q7Z4H3 204 aa11.69□□□□□ -0.54
PRPF40A-202ENST00000410080 CLEC10AQ8IUN9 316 aa11.69□□□□□ -0.54
PRPF40A-202ENST00000410080 GALNT4Q8N4A0 578 aa11.69□□□□□ -0.54
PRPF40A-202ENST00000410080 CALR3Q96L12 384 aaKnown RBP11.69□□□□□ -0.54
PRPF40A-202ENST00000410080 MYOZ2Q9NPC6 264 aa11.69□□□□□ -0.54
PRPF40A-202ENST00000410080 A0A1B0GW55 424 aa11.68□□□□□ -0.54
PRPF40A-202ENST00000410080 GNG14A0A1W2PPG7 69 aa11.68□□□□□ -0.54
PRPF40A-202ENST00000410080 ABCB1P08183 1280 aaPredicted RBP11.68□□□□□ -0.54
PRPF40A-202ENST00000410080 DUX4L2P0CJ85 424 aa11.68□□□□□ -0.54
PRPF40A-202ENST00000410080 DUX4L3P0CJ86 424 aa11.68□□□□□ -0.54
PRPF40A-202ENST00000410080 DUX4L4P0CJ87 422 aa11.68□□□□□ -0.54
PRPF40A-202ENST00000410080 DUX4L5P0CJ88 424 aa11.68□□□□□ -0.54
PRPF40A-202ENST00000410080 DUX4L6P0CJ89 424 aa11.68□□□□□ -0.54
PRPF40A-202ENST00000410080 DUX4L7P0CJ90 424 aa11.68□□□□□ -0.54
PRPF40A-202ENST00000410080 RUNX1T1Q06455 604 aa11.68□□□□□ -0.54
PRPF40A-202ENST00000410080 CYP51A1Q16850 503 aa11.68□□□□□ -0.54
PRPF40A-202ENST00000410080 PREPLQ4J6C6 727 aaPredicted RBP11.68□□□□□ -0.54
PRPF40A-202ENST00000410080 CDR2LQ86X02 465 aaPredicted RBP11.68□□□□□ -0.54
PRPF40A-202ENST00000410080 CCDC33Q8N5R6 958 aa11.68□□□□□ -0.54
PRPF40A-202ENST00000410080 HPDLQ96IR7 371 aa11.68□□□□□ -0.54
PRPF40A-202ENST00000410080 NT5C1AQ9BXI3 368 aa11.68□□□□□ -0.54
PRPF40A-202ENST00000410080 OSBPL3Q9H4L5 887 aa11.68□□□□□ -0.54
PRPF40A-202ENST00000410080 ABHD10Q9NUJ1 306 aa11.68□□□□□ -0.54
PRPF40A-202ENST00000410080 TRPC4Q9UBN4 977 aa11.68□□□□□ -0.54
PRPF40A-202ENST00000410080 DUX4Q9UBX2 424 aa11.68□□□□□ -0.54
PRPF40A-202ENST00000410080 RRP15Q9Y3B9 282 aaKnown RBP11.68□□□□□ -0.54
PRPF40A-202ENST00000410080 CTSEP14091 401 aa11.68□□□□□ -0.54
PRPF40A-202ENST00000410080 NPEPPSP55786 919 aa11.68□□□□□ -0.54
PRPF40A-202ENST00000410080 NECTIN1Q15223 517 aa11.68□□□□□ -0.54
PRPF40A-202ENST00000410080 ATP6V0D2Q8N8Y2 350 aa11.68□□□□□ -0.54
PRPF40A-202ENST00000410080 PRDM15P57071 1507 aaPredicted RBP11.68□□□□□ -0.54
PRPF40A-202ENST00000410080 DSG3P32926 999 aa11.68□□□□□ -0.54
PRPF40A-202ENST00000410080 NFRKBQ6P4R8 1299 aa11.68□□□□□ -0.54
PRPF40A-202ENST00000410080 LAYNQ6UX15 382 aa11.68□□□□□ -0.54
PRPF40A-202ENST00000410080 KCTD10Q9H3F6 313 aa11.68□□□□□ -0.54
PRPF40A-202ENST00000410080 ALKQ9UM73 1620 aa11.68□□□□□ -0.54
PRPF40A-202ENST00000410080 NFIBO00712 420 aa11.68□□□□□ -0.54
PRPF40A-202ENST00000410080 EGFRP00533 1210 aa11.68□□□□□ -0.54
PRPF40A-202ENST00000410080 ARID5BQ14865 1188 aa11.68□□□□□ -0.54
PRPF40A-202ENST00000410080 IQCMA0A1B0GVH7 501 aa11.68□□□□□ -0.54
PRPF40A-202ENST00000410080 HIC1Q14526 733 aa11.68□□□□□ -0.54
PRPF40A-202ENST00000410080 FNDC3BQ53EP0 1204 aaKnown RBP11.68□□□□□ -0.54
PRPF40A-202ENST00000410080 ARRDC4Q8NCT1 418 aa11.68□□□□□ -0.54
PRPF40A-202ENST00000410080 NLNQ9BYT8 704 aa11.68□□□□□ -0.54
PRPF40A-202ENST00000410080 SOX13Q9UN79 622 aa11.68□□□□□ -0.54
PRPF40A-202ENST00000410080 VWA5AO00534 786 aa11.68□□□□□ -0.54
PRPF40A-202ENST00000410080 AIM2O14862 343 aa11.68□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms