RNA–Protein interactions for RNA: ENST00000409854.5

EPHA4-202, Transcript of EPH receptor A4, humanhuman

TSL 1 (best) BASIC

Gene EPHA4, Length 3,454 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA4-202ENST00000409854 CTU1Q7Z7A3 348 aaKnown RBP5.85□□□□□ -1.47
EPHA4-202ENST00000409854 APPL2Q8NEU8 664 aa5.85□□□□□ -1.47
EPHA4-202ENST00000409854 SPATA18Q8TC71 538 aa5.85□□□□□ -1.47
EPHA4-202ENST00000409854 ACTRT1Q8TDG2 376 aa5.85□□□□□ -1.47
EPHA4-202ENST00000409854 RABGGTAQ92696 567 aa5.85□□□□□ -1.47
EPHA4-202ENST00000409854 UROC1Q96N76 676 aa5.85□□□□□ -1.47
EPHA4-202ENST00000409854 TOX2Q96NM4 488 aa5.85□□□□□ -1.47
EPHA4-202ENST00000409854 ELAC1Q9H777 363 aaKnown RBP5.85□□□□□ -1.47
EPHA4-202ENST00000409854 PARVAQ9NVD7 372 aa5.85□□□□□ -1.47
EPHA4-202ENST00000409854 LCMT1Q9UIC8 334 aa5.85□□□□□ -1.47
EPHA4-202ENST00000409854 STRIP2Q9ULQ0 834 aa5.85□□□□□ -1.47
EPHA4-202ENST00000409854 PODXLO00592 558 aa5.84□□□□□ -1.47
EPHA4-202ENST00000409854 SETSIPP0DME0 302 aa5.84□□□□□ -1.47
EPHA4-202ENST00000409854 HSPA8P11142 646 aaKnown RBP5.84□□□□□ -1.47
EPHA4-202ENST00000409854 CALRP27797 417 aaKnown RBP5.84□□□□□ -1.47
EPHA4-202ENST00000409854 CTNNA1P35221 906 aaKnown RBP5.84□□□□□ -1.47
EPHA4-202ENST00000409854 RPL34P49207 117 aaKnown RBP5.84□□□□□ -1.47
EPHA4-202ENST00000409854 CLCNKBP51801 687 aa5.84□□□□□ -1.47
EPHA4-202ENST00000409854 C1QTNF8P60827 252 aa5.84□□□□□ -1.47
EPHA4-202ENST00000409854 SATB1Q01826 763 aa5.84□□□□□ -1.47
EPHA4-202ENST00000409854 TAP1Q03518 808 aa5.84□□□□□ -1.47
EPHA4-202ENST00000409854 TUSC3Q13454 348 aa5.84□□□□□ -1.47
EPHA4-202ENST00000409854 SETDB1Q15047 1291 aa5.84□□□□□ -1.47
EPHA4-202ENST00000409854 ERCC6LQ2NKX8 1250 aa5.84□□□□□ -1.47
EPHA4-202ENST00000409854 DCAF12L1Q5VU92 463 aa5.84□□□□□ -1.47
EPHA4-202ENST00000409854 LLGL2Q6P1M3 1020 aa5.84□□□□□ -1.47
EPHA4-202ENST00000409854 CD300LGQ6UXG3 332 aa5.84□□□□□ -1.47
EPHA4-202ENST00000409854 PDCL2Q8N4E4 241 aa5.84□□□□□ -1.47
EPHA4-202ENST00000409854 C3orf20Q8ND61 904 aa5.84□□□□□ -1.47
EPHA4-202ENST00000409854 C3orf58Q8NDZ4 430 aa5.84□□□□□ -1.47
EPHA4-202ENST00000409854 APBB2Q92870 758 aa5.84□□□□□ -1.47
EPHA4-202ENST00000409854 CAPZA3Q96KX2 299 aa5.84□□□□□ -1.47
EPHA4-202ENST00000409854 WNT8AQ9H1J5 351 aa5.84□□□□□ -1.47
EPHA4-202ENST00000409854 CARD9Q9H257 536 aa5.84□□□□□ -1.47
EPHA4-202ENST00000409854 TMEM59LQ9UK28 342 aa5.84□□□□□ -1.47
EPHA4-202ENST00000409854 FAM170AA1A519 330 aa5.84□□□□□ -1.47
EPHA4-202ENST00000409854 TMEM191CA6NGB0 347 aa5.84□□□□□ -1.47
EPHA4-202ENST00000409854 PARNO95453 639 aaKnown RBP5.84□□□□□ -1.47
EPHA4-202ENST00000409854 CXCL10P02778 98 aa5.84□□□□□ -1.47
EPHA4-202ENST00000409854 COMTP21964 271 aa5.84□□□□□ -1.47
EPHA4-202ENST00000409854 CXCR5P32302 372 aa5.84□□□□□ -1.47
EPHA4-202ENST00000409854 SLC1A1P43005 524 aa5.84□□□□□ -1.47
EPHA4-202ENST00000409854 PEX5P50542 639 aa5.84□□□□□ -1.47
EPHA4-202ENST00000409854 PDCLQ13371 301 aa5.84□□□□□ -1.47
EPHA4-202ENST00000409854 ELF2Q15723 593 aa5.84□□□□□ -1.47
EPHA4-202ENST00000409854 ZKSCAN8Q15776 578 aaPredicted RBP5.84□□□□□ -1.47
EPHA4-202ENST00000409854 CFAP221Q4G0U5 840 aa5.84□□□□□ -1.47
EPHA4-202ENST00000409854 PPP1R26Q5T8A7 1209 aaPredicted RBP5.84□□□□□ -1.47
EPHA4-202ENST00000409854 OSTM1Q86WC4 334 aa5.84□□□□□ -1.47
EPHA4-202ENST00000409854 ERICH1Q86X53 443 aa5.84□□□□□ -1.47
EPHA4-202ENST00000409854 ADGRF2Q8IZF7 708 aa5.84□□□□□ -1.47
EPHA4-202ENST00000409854 CRIPAKQ8N1N5 446 aa5.84□□□□□ -1.47
EPHA4-202ENST00000409854 TMEM86AQ8N2M4 240 aa5.84□□□□□ -1.47
EPHA4-202ENST00000409854 MMGT1Q8N4V1 131 aa5.84□□□□□ -1.47
EPHA4-202ENST00000409854 OTUD6BQ8N6M0 293 aa5.84□□□□□ -1.47
EPHA4-202ENST00000409854 ANKLE1Q8NAG6 615 aa5.84□□□□□ -1.47
EPHA4-202ENST00000409854 MSANTD4Q8NCY6 345 aa5.84□□□□□ -1.47
EPHA4-202ENST00000409854 TSC1Q92574 1164 aa5.84□□□□□ -1.47
EPHA4-202ENST00000409854 UBXN4Q92575 508 aa5.84□□□□□ -1.47
EPHA4-202ENST00000409854 DDX27Q96GQ7 796 aaKnown RBP5.84□□□□□ -1.47
EPHA4-202ENST00000409854 HEXIM2Q96MH2 286 aaKnown RBP5.84□□□□□ -1.47
EPHA4-202ENST00000409854 DPEP3Q9H4B8 488 aa5.84□□□□□ -1.47
EPHA4-202ENST00000409854 WDR35Q9P2L0 1181 aa5.84□□□□□ -1.47
EPHA4-202ENST00000409854 CHORDC1Q9UHD1 332 aaPredicted RBP5.84□□□□□ -1.47
EPHA4-202ENST00000409854 ANAPC7Q9UJX3 599 aa5.84□□□□□ -1.47
EPHA4-202ENST00000409854 TSPAN16Q9UKR8 245 aa5.84□□□□□ -1.47
EPHA4-202ENST00000409854 PLXNA3P51805 1871 aa5.84□□□□□ -1.47
EPHA4-202ENST00000409854 MYO16Q9Y6X6 1858 aa5.84□□□□□ -1.47
EPHA4-202ENST00000409854 CCDC66A2RUB6 948 aa5.84□□□□□ -1.47
EPHA4-202ENST00000409854 M0QYV0 167 aa5.84□□□□□ -1.47
EPHA4-202ENST00000409854 KCNK3O14649 394 aa5.84□□□□□ -1.47
EPHA4-202ENST00000409854 HUS1O60921 280 aa5.84□□□□□ -1.47
EPHA4-202ENST00000409854 PROSCO94903 275 aa5.84□□□□□ -1.47
EPHA4-202ENST00000409854 CYP11A1P05108 521 aa5.84□□□□□ -1.47
EPHA4-202ENST00000409854 DSC1Q08554 894 aa5.84□□□□□ -1.47
EPHA4-202ENST00000409854 ZNF252P-AS1Q0IIN9 211 aa5.84□□□□□ -1.47
EPHA4-202ENST00000409854 ZNF268Q14587 947 aaPredicted RBP5.84□□□□□ -1.47
EPHA4-202ENST00000409854 MESDQ14696 234 aa5.84□□□□□ -1.47
EPHA4-202ENST00000409854 GOLGA7BQ2TAP0 167 aa5.84□□□□□ -1.47
EPHA4-202ENST00000409854 C2CD6Q53TS8 623 aa5.84□□□□□ -1.47
EPHA4-202ENST00000409854 CLLU1OSQ5K130 101 aa5.84□□□□□ -1.47
EPHA4-202ENST00000409854 ACOT1Q86TX2 421 aa5.84□□□□□ -1.47
EPHA4-202ENST00000409854 TTC30AQ86WT1 665 aa5.84□□□□□ -1.47
EPHA4-202ENST00000409854 XYLT1Q86Y38 959 aa5.84□□□□□ -1.47
EPHA4-202ENST00000409854 GPR161Q8N6U8 529 aaKnown RBP5.84□□□□□ -1.47
EPHA4-202ENST00000409854 NIPA2Q8N8Q9 360 aa5.84□□□□□ -1.47
EPHA4-202ENST00000409854 OR6B3Q8NGW1 331 aa5.84□□□□□ -1.47
EPHA4-202ENST00000409854 FEZF2Q8TBJ5 459 aa5.84□□□□□ -1.47
EPHA4-202ENST00000409854 STK32AQ8WU08 396 aa5.84□□□□□ -1.47
EPHA4-202ENST00000409854 ALG3Q92685 438 aa5.84□□□□□ -1.47
EPHA4-202ENST00000409854 MCRS1Q96EZ8 462 aa5.84□□□□□ -1.47
EPHA4-202ENST00000409854 BTBD6Q96KE9 485 aa5.84□□□□□ -1.47
EPHA4-202ENST00000409854 CPXM1Q96SM3 734 aa5.84□□□□□ -1.47
EPHA4-202ENST00000409854 PSMB7Q99436 277 aa5.84□□□□□ -1.47
EPHA4-202ENST00000409854 CYLDQ9NQC7 956 aa5.84□□□□□ -1.47
EPHA4-202ENST00000409854 TMEM161AQ9NX61 479 aa5.84□□□□□ -1.47
EPHA4-202ENST00000409854 NOL12Q9UGY1 213 aaKnown RBP eCLIP5.84□□□□□ -1.47
EPHA4-202ENST00000409854 PCDHA3Q9Y5H8 950 aa5.84□□□□□ -1.47
EPHA4-202ENST00000409854 V9GYY5 206 aaPredicted RBP5.84□□□□□ -1.47
EPHA4-202ENST00000409854 A8MXQ7 604 aa5.83□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms