RNA–Protein interactions for RNA: ENST00000409455.5

LIMS2-205, Transcript of LIM zinc finger domain containing 2, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene LIMS2, Length 2,500 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-205ENST00000409455 ADRA1DP25100 572 aa16.24■□□□□ 0.19
LIMS2-205ENST00000409455 MOB2Q70IA6 237 aa16.24■□□□□ 0.19
LIMS2-205ENST00000409455 OTOP1Q7RTM1 612 aa16.24■□□□□ 0.19
LIMS2-205ENST00000409455 REPS2Q8NFH8 660 aa16.24■□□□□ 0.19
LIMS2-205ENST00000409455 WDR60Q8WVS4 1066 aa16.24■□□□□ 0.19
LIMS2-205ENST00000409455 NACC1Q96RE7 527 aa16.24■□□□□ 0.19
LIMS2-205ENST00000409455 MAK16Q9BXY0 300 aaKnown RBP16.24■□□□□ 0.19
LIMS2-205ENST00000409455 OSBPL8Q9BZF1 889 aa16.24■□□□□ 0.19
LIMS2-205ENST00000409455 TMEM117Q9H0C3 514 aa16.24■□□□□ 0.19
LIMS2-205ENST00000409455 TMEM206Q9H813 350 aa16.24■□□□□ 0.19
LIMS2-205ENST00000409455 ADAMTS5Q9UNA0 930 aa16.24■□□□□ 0.19
LIMS2-205ENST00000409455 WDR91A4D1P6 747 aa16.24■□□□□ 0.19
LIMS2-205ENST00000409455 PSMC4P43686 418 aa16.24■□□□□ 0.19
LIMS2-205ENST00000409455 ARFIP2P53365 341 aa16.24■□□□□ 0.19
LIMS2-205ENST00000409455 GHRHRQ02643 423 aa16.24■□□□□ 0.19
LIMS2-205ENST00000409455 THOC5Q13769 683 aaKnown RBP16.24■□□□□ 0.19
LIMS2-205ENST00000409455 RASA2Q15283 850 aa16.24■□□□□ 0.19
LIMS2-205ENST00000409455 HP1BP3Q5SSJ5 553 aaPredicted RBP16.24■□□□□ 0.19
LIMS2-205ENST00000409455 FAM43BQ6ZT52 329 aaPredicted RBP16.24■□□□□ 0.19
LIMS2-205ENST00000409455 CCDC28BQ9BUN5 200 aa16.24■□□□□ 0.19
LIMS2-205ENST00000409455 CSADQ9Y600 493 aa16.24■□□□□ 0.19
LIMS2-205ENST00000409455 UMODL1Q5DID0 1318 aa16.24■□□□□ 0.19
LIMS2-205ENST00000409455 GLTPD2A6NH11 291 aa16.23■□□□□ 0.19
LIMS2-205ENST00000409455 DNALI1O14645 258 aaPredicted RBP16.23■□□□□ 0.19
LIMS2-205ENST00000409455 ATP2A1O14983 1001 aa16.23■□□□□ 0.19
LIMS2-205ENST00000409455 PYGLP06737 847 aa16.23■□□□□ 0.19
LIMS2-205ENST00000409455 LYNP07948 512 aa16.23■□□□□ 0.19
LIMS2-205ENST00000409455 ITGB5P18084 799 aa16.23■□□□□ 0.19
LIMS2-205ENST00000409455 RANBP1P43487 201 aa16.23■□□□□ 0.19
LIMS2-205ENST00000409455 PTP4A2Q12974 167 aa16.23■□□□□ 0.19
LIMS2-205ENST00000409455 FASTKD3Q14CZ7 662 aaKnown RBP16.23■□□□□ 0.19
LIMS2-205ENST00000409455 CLEC16AQ2KHT3 1053 aa16.23■□□□□ 0.19
LIMS2-205ENST00000409455 C1orf220Q5T0J3 134 aa16.23■□□□□ 0.19
LIMS2-205ENST00000409455 ZBED8Q8IZ13 594 aa16.23■□□□□ 0.19
LIMS2-205ENST00000409455 XXYLT1Q8NBI6 393 aa16.23■□□□□ 0.19
LIMS2-205ENST00000409455 IL31RAQ8NI17 732 aa16.23■□□□□ 0.19
LIMS2-205ENST00000409455 TAAR1Q96RJ0 339 aa16.23■□□□□ 0.19
LIMS2-205ENST00000409455 STRA6Q9BX79 667 aa16.23■□□□□ 0.19
LIMS2-205ENST00000409455 KRT82Q9NSB4 513 aa16.23■□□□□ 0.19
LIMS2-205ENST00000409455 KANSL3Q9P2N6 904 aa16.23■□□□□ 0.19
LIMS2-205ENST00000409455 ZNF214Q9UL59 606 aaPredicted RBP16.23■□□□□ 0.19
LIMS2-205ENST00000409455 DNAJC6O75061 913 aa16.23■□□□□ 0.19
LIMS2-205ENST00000409455 PSMD10O75832 226 aa16.23■□□□□ 0.19
LIMS2-205ENST00000409455 SERPINB3P29508 390 aa16.23■□□□□ 0.19
LIMS2-205ENST00000409455 ADSSP30520 456 aa16.23■□□□□ 0.19
LIMS2-205ENST00000409455 PIK3CAP42336 1068 aa16.23■□□□□ 0.19
LIMS2-205ENST00000409455 TMEM132BQ14DG7 1078 aa16.23■□□□□ 0.19
LIMS2-205ENST00000409455 SH3D19Q5HYK7 790 aa16.23■□□□□ 0.19
LIMS2-205ENST00000409455 SNRNP48Q6IEG0 339 aaKnown RBP16.23■□□□□ 0.19
LIMS2-205ENST00000409455 SDCCAG8Q86SQ7 713 aaPredicted RBP16.23■□□□□ 0.19
LIMS2-205ENST00000409455 KBTBD2Q8IY47 623 aa16.23■□□□□ 0.19
LIMS2-205ENST00000409455 AZIN2Q96A70 460 aa16.23■□□□□ 0.19
LIMS2-205ENST00000409455 CBWD1Q9BRT8 395 aa16.23■□□□□ 0.19
LIMS2-205ENST00000409455 ADAM33Q9BZ11 813 aa16.23■□□□□ 0.19
LIMS2-205ENST00000409455 MANSC1Q9H8J5 431 aa16.23■□□□□ 0.19
LIMS2-205ENST00000409455 DDX43Q9NXZ2 648 aaKnown RBP16.23■□□□□ 0.19
LIMS2-205ENST00000409455 TAS2R1Q9NYW7 299 aa16.23■□□□□ 0.19
LIMS2-205ENST00000409455 MTO1Q9Y2Z2 717 aaKnown RBP16.23■□□□□ 0.19
LIMS2-205ENST00000409455 TISP43B9A030 160 aa16.22■□□□□ 0.19
LIMS2-205ENST00000409455 TM9SF1O15321 606 aa16.22■□□□□ 0.19
LIMS2-205ENST00000409455 PSTPIP1O43586 416 aa16.22■□□□□ 0.19
LIMS2-205ENST00000409455 CREB3O43889 395 aa16.22■□□□□ 0.19
LIMS2-205ENST00000409455 MYH11P35749 1972 aa16.22■□□□□ 0.19
LIMS2-205ENST00000409455 GEMIN4P57678 1058 aaKnown RBP16.22■□□□□ 0.19
LIMS2-205ENST00000409455 CDK16Q00536 496 aa16.22■□□□□ 0.19
LIMS2-205ENST00000409455 DSG1Q02413 1049 aa16.22■□□□□ 0.19
LIMS2-205ENST00000409455 PPP2R5CQ13362 524 aa16.22■□□□□ 0.19
LIMS2-205ENST00000409455 KRT72Q14CN4 511 aa16.22■□□□□ 0.19
LIMS2-205ENST00000409455 WDR72Q3MJ13 1102 aa16.22■□□□□ 0.19
LIMS2-205ENST00000409455 EAPPQ56P03 285 aaPredicted RBP16.22■□□□□ 0.19
LIMS2-205ENST00000409455 RINLQ6ZS11 566 aa16.22■□□□□ 0.19
LIMS2-205ENST00000409455 SMC1BQ8NDV3 1235 aa16.22■□□□□ 0.19
LIMS2-205ENST00000409455 ZC3H15Q8WU90 426 aaKnown RBP16.22■□□□□ 0.19
LIMS2-205ENST00000409455 OPTNQ96CV9 577 aa16.22■□□□□ 0.19
LIMS2-205ENST00000409455 CDCA5Q96FF9 252 aa16.22■□□□□ 0.19
LIMS2-205ENST00000409455 IWS1Q96ST2 819 aa16.22■□□□□ 0.19
LIMS2-205ENST00000409455 MXRA8Q9BRK3 442 aa16.22■□□□□ 0.19
LIMS2-205ENST00000409455 CENPKQ9BS16 269 aa16.22■□□□□ 0.19
LIMS2-205ENST00000409455 ZNF577Q9BSK1 485 aa16.22■□□□□ 0.19
LIMS2-205ENST00000409455 TSSK1BQ9BXA7 367 aa16.22■□□□□ 0.19
LIMS2-205ENST00000409455 AVENQ9NQS1 362 aaPredicted RBP16.22■□□□□ 0.19
LIMS2-205ENST00000409455 RNF146Q9NTX7 359 aa16.22■□□□□ 0.19
LIMS2-205ENST00000409455 MAP3K20Q9NYL2 800 aaKnown RBP16.22■□□□□ 0.19
LIMS2-205ENST00000409455 HSPBP1Q9NZL4 362 aa16.22■□□□□ 0.19
LIMS2-205ENST00000409455 WASF2Q9Y6W5 498 aa16.22■□□□□ 0.19
LIMS2-205ENST00000409455 ARHGEF35A5YM69 484 aa16.22■□□□□ 0.19
LIMS2-205ENST00000409455 PDLIM1O00151 329 aa16.22■□□□□ 0.19
LIMS2-205ENST00000409455 PMM2O15305 246 aa16.22■□□□□ 0.19
LIMS2-205ENST00000409455 ZCCHC18P0CG32 403 aa16.22■□□□□ 0.19
LIMS2-205ENST00000409455 PGM1P36871 562 aa16.22■□□□□ 0.19
LIMS2-205ENST00000409455 IREB2P48200 963 aaKnown RBP16.22■□□□□ 0.19
LIMS2-205ENST00000409455 CENPUQ71F23 418 aa16.22■□□□□ 0.19
LIMS2-205ENST00000409455 RHOT1Q8IXI2 618 aa16.22■□□□□ 0.19
LIMS2-205ENST00000409455 DDX1Q92499 740 aaKnown RBP16.22■□□□□ 0.19
LIMS2-205ENST00000409455 SKA1Q96BD8 255 aa16.22■□□□□ 0.19
LIMS2-205ENST00000409455 TRIM11Q96F44 468 aa16.22■□□□□ 0.19
LIMS2-205ENST00000409455 CLMNQ96JQ2 1002 aa16.22■□□□□ 0.19
LIMS2-205ENST00000409455 SPATA16Q9BXB7 569 aa16.22■□□□□ 0.19
LIMS2-205ENST00000409455 ASCC2Q9H1I8 757 aaPredicted RBP16.22■□□□□ 0.19
LIMS2-205ENST00000409455 ELP3Q9H9T3 547 aa16.22■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms