RNA–Protein interactions for RNA: ENST00000409435.5

SCN9A-202, Transcript of sodium voltage-gated channel alpha subunit 9, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SCN9A, Length 5,967 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN9A-202ENST00000409435 NR5A1Q13285 461 aa7.65□□□□□ -1.19
SCN9A-202ENST00000409435 CCINQ13939 588 aa7.65□□□□□ -1.19
SCN9A-202ENST00000409435 MMEL1Q495T6 779 aa7.65□□□□□ -1.19
SCN9A-202ENST00000409435 GPR158Q5T848 1215 aa7.65□□□□□ -1.19
SCN9A-202ENST00000409435 DAB2IPQ5VWQ8 1189 aa7.65□□□□□ -1.19
SCN9A-202ENST00000409435 MTHFD1LQ6UB35 978 aa7.65□□□□□ -1.19
SCN9A-202ENST00000409435 TAS2R42Q7RTR8 314 aa7.65□□□□□ -1.19
SCN9A-202ENST00000409435 DBF4BQ8NFT6 615 aa7.65□□□□□ -1.19
SCN9A-202ENST00000409435 INTS4Q96HW7 963 aaKnown RBP7.65□□□□□ -1.19
SCN9A-202ENST00000409435 GPR88Q9GZN0 384 aa7.65□□□□□ -1.19
SCN9A-202ENST00000409435 UNC45AQ9H3U1 944 aa7.65□□□□□ -1.19
SCN9A-202ENST00000409435 KLHL31Q9H511 634 aa7.65□□□□□ -1.19
SCN9A-202ENST00000409435 FAM207AQ9NSI2 230 aaPredicted RBP7.65□□□□□ -1.19
SCN9A-202ENST00000409435 FGFR1OP2Q9NVK5 253 aa7.65□□□□□ -1.19
SCN9A-202ENST00000409435 COL1A1P02452 1464 aaPredicted RBP7.64□□□□□ -1.19
SCN9A-202ENST00000409435 SLC12A8A0AV02 714 aa7.64□□□□□ -1.19
SCN9A-202ENST00000409435 GNGT2O14610 69 aa7.64□□□□□ -1.19
SCN9A-202ENST00000409435 ARHGAP6O43182 974 aa7.64□□□□□ -1.19
SCN9A-202ENST00000409435 CSF2RAP15509 400 aa7.64□□□□□ -1.19
SCN9A-202ENST00000409435 ERVK-21P61565 698 aa7.64□□□□□ -1.19
SCN9A-202ENST00000409435 CYLC2Q14093 348 aaPredicted RBP7.64□□□□□ -1.19
SCN9A-202ENST00000409435 TMEM164Q5U3C3 297 aa7.64□□□□□ -1.19
SCN9A-202ENST00000409435 ADCK2Q7Z695 626 aa7.64□□□□□ -1.19
SCN9A-202ENST00000409435 BBOF1Q8ND07 529 aa7.64□□□□□ -1.19
SCN9A-202ENST00000409435 ST13P5Q8NFI4 369 aaPredicted RBP7.64□□□□□ -1.19
SCN9A-202ENST00000409435 RAD54LQ92698 747 aa7.64□□□□□ -1.19
SCN9A-202ENST00000409435 GAD1Q99259 594 aa7.64□□□□□ -1.19
SCN9A-202ENST00000409435 CALN1Q9BXU9 219 aa7.64□□□□□ -1.19
SCN9A-202ENST00000409435 LY9Q9HBG7 655 aa7.64□□□□□ -1.19
SCN9A-202ENST00000409435 ZSWIM6Q9HCJ5 1215 aa7.64□□□□□ -1.19
SCN9A-202ENST00000409435 WARS2Q9UGM6 360 aaKnown RBP7.64□□□□□ -1.19
SCN9A-202ENST00000409435 CDV3Q9UKY7 258 aaKnown RBP7.64□□□□□ -1.19
SCN9A-202ENST00000409435 IGF2BP3O00425 579 aaKnown RBP eCLIP7.64□□□□□ -1.19
SCN9A-202ENST00000409435 ZNF202O95125 648 aa7.64□□□□□ -1.19
SCN9A-202ENST00000409435 TIMP1P01033 207 aa7.64□□□□□ -1.19
SCN9A-202ENST00000409435 UBA1P22314 1058 aaKnown RBP7.64□□□□□ -1.19
SCN9A-202ENST00000409435 PSMA2P25787 234 aa7.64□□□□□ -1.19
SCN9A-202ENST00000409435 SLC39A12Q504Y0 691 aa7.64□□□□□ -1.19
SCN9A-202ENST00000409435 KAZNQ674X7 775 aa7.64□□□□□ -1.19
SCN9A-202ENST00000409435 ERLEC1Q96DZ1 483 aa7.64□□□□□ -1.19
SCN9A-202ENST00000409435 MAGEB5Q9BZ81 275 aa7.64□□□□□ -1.19
SCN9A-202ENST00000409435 GPN3Q9UHW5 284 aaPredicted RBP7.64□□□□□ -1.19
SCN9A-202ENST00000409435 YWHAQP27348 245 aa7.64□□□□□ -1.19
SCN9A-202ENST00000409435 MLH1P40692 756 aa7.64□□□□□ -1.19
SCN9A-202ENST00000409435 NRLP54845 237 aa7.64□□□□□ -1.19
SCN9A-202ENST00000409435 AP1B1Q10567 949 aa7.64□□□□□ -1.19
SCN9A-202ENST00000409435 SCRN1Q12765 414 aa7.64□□□□□ -1.19
SCN9A-202ENST00000409435 PRKAA1Q13131 559 aa7.64□□□□□ -1.19
SCN9A-202ENST00000409435 MTA1Q13330 715 aa7.64□□□□□ -1.19
SCN9A-202ENST00000409435 NXNQ6DKJ4 435 aa7.64□□□□□ -1.19
SCN9A-202ENST00000409435 RRAGAQ7L523 313 aa7.64□□□□□ -1.19
SCN9A-202ENST00000409435 RAB44Q7Z6P3 723 aaPredicted RBP7.64□□□□□ -1.19
SCN9A-202ENST00000409435 E2F7Q96AV8 911 aa7.64□□□□□ -1.19
SCN9A-202ENST00000409435 CFAP36Q96G28 342 aa7.64□□□□□ -1.19
SCN9A-202ENST00000409435 MPP4Q96JB8 637 aa7.64□□□□□ -1.19
SCN9A-202ENST00000409435 TRMT61BQ9BVS5 477 aaKnown RBP7.64□□□□□ -1.19
SCN9A-202ENST00000409435 C17orf75Q9HAS0 396 aa7.64□□□□□ -1.19
SCN9A-202ENST00000409435 CAMSAP3Q9P1Y5 1249 aaPredicted RBP7.64□□□□□ -1.19
SCN9A-202ENST00000409435 STOML1Q9UBI4 398 aa7.64□□□□□ -1.19
SCN9A-202ENST00000409435 A0A087WWV3 80 aa7.64□□□□□ -1.19
SCN9A-202ENST00000409435 CFAP99D6REC4 459 aa7.64□□□□□ -1.19
SCN9A-202ENST00000409435 MAN2B1O00754 1011 aa7.64□□□□□ -1.19
SCN9A-202ENST00000409435 RASGRF2O14827 1237 aa7.64□□□□□ -1.19
SCN9A-202ENST00000409435 SPAG7O75391 227 aa7.64□□□□□ -1.19
SCN9A-202ENST00000409435 RHOBTB3O94955 611 aa7.64□□□□□ -1.19
SCN9A-202ENST00000409435 ERVK-10P10266 1014 aa7.64□□□□□ -1.19
SCN9A-202ENST00000409435 RABGGTBP53611 331 aa7.64□□□□□ -1.19
SCN9A-202ENST00000409435 CDH8P55286 799 aa7.64□□□□□ -1.19
SCN9A-202ENST00000409435 TWF1Q12792 350 aa7.64□□□□□ -1.19
SCN9A-202ENST00000409435 EFEMP1Q12805 493 aa7.64□□□□□ -1.19
SCN9A-202ENST00000409435 PPP6R3Q5H9R7 873 aaPredicted RBP7.64□□□□□ -1.19
SCN9A-202ENST00000409435 ADCK1Q86TW2 530 aa7.64□□□□□ -1.19
SCN9A-202ENST00000409435 UHRF1Q96T88 793 aaPredicted RBP7.64□□□□□ -1.19
SCN9A-202ENST00000409435 DNAJC7Q99615 494 aa7.64□□□□□ -1.19
SCN9A-202ENST00000409435 PDE11AQ9HCR9 933 aa7.64□□□□□ -1.19
SCN9A-202ENST00000409435 TAB2Q9NYJ8 693 aa7.64□□□□□ -1.19
SCN9A-202ENST00000409435 VPS28Q9UK41 221 aa7.64□□□□□ -1.19
SCN9A-202ENST00000409435 SNX5Q9Y5X3 404 aa7.64□□□□□ -1.19
SCN9A-202ENST00000409435 EIF3CLB5ME19 914 aaKnown RBP7.64□□□□□ -1.19
SCN9A-202ENST00000409435 H3BRJ5 948 aa7.64□□□□□ -1.19
SCN9A-202ENST00000409435 LRRN2O75325 713 aa7.64□□□□□ -1.19
SCN9A-202ENST00000409435 IFNB1P01574 187 aa7.64□□□□□ -1.19
SCN9A-202ENST00000409435 HDCP19113 662 aa7.64□□□□□ -1.19
SCN9A-202ENST00000409435 SDHBP21912 280 aa7.64□□□□□ -1.19
SCN9A-202ENST00000409435 ETFBP38117 255 aa7.64□□□□□ -1.19
SCN9A-202ENST00000409435 GEMIN4P57678 1058 aaKnown RBP7.64□□□□□ -1.19
SCN9A-202ENST00000409435 IL9RQ01113 521 aa7.64□□□□□ -1.19
SCN9A-202ENST00000409435 MYL5Q02045 173 aa7.64□□□□□ -1.19
SCN9A-202ENST00000409435 GRIK3Q13003 919 aa7.64□□□□□ -1.19
SCN9A-202ENST00000409435 STAT4Q14765 748 aa7.64□□□□□ -1.19
SCN9A-202ENST00000409435 TMED2Q15363 201 aa7.64□□□□□ -1.19
SCN9A-202ENST00000409435 CEP78Q5JTW2 689 aa7.64□□□□□ -1.19
SCN9A-202ENST00000409435 FAM46CQ5VWP2 391 aa7.64□□□□□ -1.19
SCN9A-202ENST00000409435 FAM124AQ86V42 546 aa7.64□□□□□ -1.19
SCN9A-202ENST00000409435 FBXO18Q8NFZ0 1043 aa7.64□□□□□ -1.19
SCN9A-202ENST00000409435 EIF3CQ99613 913 aaKnown RBP7.64□□□□□ -1.19
SCN9A-202ENST00000409435 TRIM31Q9BZY9 425 aa7.64□□□□□ -1.19
SCN9A-202ENST00000409435 RANBP17Q9H2T7 1088 aaKnown RBP7.64□□□□□ -1.19
SCN9A-202ENST00000409435 GIT1Q9Y2X7 761 aa7.64□□□□□ -1.19
SCN9A-202ENST00000409435 Q9Y3F1 56 aa7.64□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms