RNA–Protein interactions for RNA: ENST00000409417.5

PDLIM2-207, Transcript of PDZ and LIM domain 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDLIM2, Length 1,487 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-207ENST00000409417 RAP1GAPP47736 663 aa21.2■□□□□ 0.98
PDLIM2-207ENST00000409417 ALDH1A3P47895 512 aa21.2■□□□□ 0.98
PDLIM2-207ENST00000409417 CDR1P51861 262 aa21.2■□□□□ 0.98
PDLIM2-207ENST00000409417 PSMC1P62191 440 aaKnown RBP21.2■□□□□ 0.98
PDLIM2-207ENST00000409417 CETN1Q12798 172 aa21.2■□□□□ 0.98
PDLIM2-207ENST00000409417 KCNH2Q12809 1159 aa21.2■□□□□ 0.98
PDLIM2-207ENST00000409417 GRASPQ7Z6J2 395 aaPredicted RBP21.2■□□□□ 0.98
PDLIM2-207ENST00000409417 GJD3Q8N144 294 aa21.2■□□□□ 0.98
PDLIM2-207ENST00000409417 TTC9BQ8N6N2 239 aa21.2■□□□□ 0.98
PDLIM2-207ENST00000409417 RPGRIP1Q96KN7 1286 aa21.2■□□□□ 0.98
PDLIM2-207ENST00000409417 CRTAC1Q9NQ79 661 aa21.2■□□□□ 0.98
PDLIM2-207ENST00000409417 USTQ9Y2C2 406 aa21.2■□□□□ 0.98
PDLIM2-207ENST00000409417 MUC3AQ02505 3323 aa21.19■□□□□ 0.98
PDLIM2-207ENST00000409417 EPHB3P54753 998 aa21.19■□□□□ 0.98
PDLIM2-207ENST00000409417 CFAP221Q4G0U5 840 aa21.19■□□□□ 0.98
PDLIM2-207ENST00000409417 FAM114A1Q8IWE2 563 aa21.19■□□□□ 0.98
PDLIM2-207ENST00000409417 ELMOD1Q8N336 334 aa21.19■□□□□ 0.98
PDLIM2-207ENST00000409417 MYCBPAPQ8TBZ2 947 aa21.19■□□□□ 0.98
PDLIM2-207ENST00000409417 ENOX1Q8TC92 643 aaKnown RBP21.19■□□□□ 0.98
PDLIM2-207ENST00000409417 FUBP3Q96I24 572 aaKnown RBP eCLIP21.19■□□□□ 0.98
PDLIM2-207ENST00000409417 SEPT5Q99719 369 aaPredicted RBP21.19■□□□□ 0.98
PDLIM2-207ENST00000409417 CEP72Q9P209 647 aa21.19■□□□□ 0.98
PDLIM2-207ENST00000409417 DNMT3BQ9UBC3 853 aaKnown RBP21.19■□□□□ 0.98
PDLIM2-207ENST00000409417 AFPP02771 609 aaKnown RBP21.18■□□□□ 0.98
PDLIM2-207ENST00000409417 HAPLN1P10915 354 aaPredicted RBP21.18■□□□□ 0.98
PDLIM2-207ENST00000409417 PTPN2P17706 415 aa21.18■□□□□ 0.98
PDLIM2-207ENST00000409417 PTPN1P18031 435 aaKnown RBP21.18■□□□□ 0.98
PDLIM2-207ENST00000409417 SSTR3P32745 418 aaPredicted RBP21.18■□□□□ 0.98
PDLIM2-207ENST00000409417 CCDC142Q17RM4 750 aa21.18■□□□□ 0.98
PDLIM2-207ENST00000409417 MGAT5BQ3V5L5 792 aa21.18■□□□□ 0.98
PDLIM2-207ENST00000409417 IQCEQ6IPM2 695 aa21.18■□□□□ 0.98
PDLIM2-207ENST00000409417 C4orf50Q6ZRC1 276 aa21.18■□□□□ 0.98
PDLIM2-207ENST00000409417 OTOP3Q7RTS5 596 aa21.18■□□□□ 0.98
PDLIM2-207ENST00000409417 CREBRFQ8IUR6 639 aa21.18■□□□□ 0.98
PDLIM2-207ENST00000409417 ZNF512Q96ME7 567 aaPredicted RBP21.18■□□□□ 0.98
PDLIM2-207ENST00000409417 HCFC1R1Q9NWW0 138 aa21.18■□□□□ 0.98
PDLIM2-207ENST00000409417 C2orf16Q68DN1 1984 aa21.18■□□□□ 0.98
PDLIM2-207ENST00000409417 SOAT2O75908 522 aa21.17■□□□□ 0.98
PDLIM2-207ENST00000409417 TYRO3Q06418 890 aa21.17■□□□□ 0.98
PDLIM2-207ENST00000409417 INCA1Q0VD86 236 aa21.17■□□□□ 0.98
PDLIM2-207ENST00000409417 PABPC1LQ4VXU2 614 aaKnown RBP21.17■□□□□ 0.98
PDLIM2-207ENST00000409417 UNC93AQ86WB7 457 aa21.17■□□□□ 0.98
PDLIM2-207ENST00000409417 SPATA2LQ8IUW3 424 aaPredicted RBP21.17■□□□□ 0.98
PDLIM2-207ENST00000409417 B3GALNT2Q8NCR0 500 aa21.17■□□□□ 0.98
PDLIM2-207ENST00000409417 TNIP3Q96KP6 325 aa21.17■□□□□ 0.98
PDLIM2-207ENST00000409417 DNAJC25Q9H1X3 360 aa21.17■□□□□ 0.98
PDLIM2-207ENST00000409417 DPEP3Q9H4B8 488 aa21.17■□□□□ 0.98
PDLIM2-207ENST00000409417 CD320Q9NPF0 282 aa21.17■□□□□ 0.98
PDLIM2-207ENST00000409417 AVENQ9NQS1 362 aaPredicted RBP21.17■□□□□ 0.98
PDLIM2-207ENST00000409417 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP21.17■□□□□ 0.98
PDLIM2-207ENST00000409417 ASB3Q9Y575 518 aa21.17■□□□□ 0.98
PDLIM2-207ENST00000409417 RHOP08100 348 aa21.16■□□□□ 0.98
PDLIM2-207ENST00000409417 SP100P23497 879 aaPredicted RBP21.16■□□□□ 0.98
PDLIM2-207ENST00000409417 FSHRP23945 695 aa21.16■□□□□ 0.98
PDLIM2-207ENST00000409417 CYP2F1P24903 491 aa21.16■□□□□ 0.98
PDLIM2-207ENST00000409417 NDST1P52848 882 aa21.16■□□□□ 0.98
PDLIM2-207ENST00000409417 NTHL1P78549 312 aa21.16■□□□□ 0.98
PDLIM2-207ENST00000409417 MDH1BQ5I0G3 518 aa21.16■□□□□ 0.98
PDLIM2-207ENST00000409417 C11orf57Q6ZUT1 292 aaPredicted RBP21.16■□□□□ 0.98
PDLIM2-207ENST00000409417 TATDN2Q93075 761 aa21.16■□□□□ 0.98
PDLIM2-207ENST00000409417 MYLPFQ96A32 169 aa21.16■□□□□ 0.98
PDLIM2-207ENST00000409417 ACSF2Q96CM8 615 aaPredicted RBP21.16■□□□□ 0.98
PDLIM2-207ENST00000409417 PCED1BQ96HM7 432 aa21.16■□□□□ 0.98
PDLIM2-207ENST00000409417 CORO1BQ9BR76 489 aa21.16■□□□□ 0.98
PDLIM2-207ENST00000409417 FAM124BQ9H5Z6 455 aaPredicted RBP21.16■□□□□ 0.98
PDLIM2-207ENST00000409417 MAGEC2Q9UBF1 373 aaPredicted RBP21.16■□□□□ 0.98
PDLIM2-207ENST00000409417 NFE2L3Q9Y4A8 694 aa21.16■□□□□ 0.98
PDLIM2-207ENST00000409417 DOCK6Q96HP0 2047 aa21.16■□□□□ 0.98
PDLIM2-207ENST00000409417 C2CD4DB7Z1M9 353 aa21.15■□□□□ 0.98
PDLIM2-207ENST00000409417 LETM1O95202 739 aaPredicted RBP21.15■□□□□ 0.98
PDLIM2-207ENST00000409417 ATF6P18850 670 aa21.15■□□□□ 0.98
PDLIM2-207ENST00000409417 MAGEA11P43364 429 aa21.15■□□□□ 0.98
PDLIM2-207ENST00000409417 MTIF2P46199 727 aaKnown RBP21.15■□□□□ 0.98
PDLIM2-207ENST00000409417 SKOR2Q2VWA4 1001 aaPredicted RBP21.15■□□□□ 0.98
PDLIM2-207ENST00000409417 CRYBG2Q8N1P7 616 aa21.15■□□□□ 0.98
PDLIM2-207ENST00000409417 TTC39CQ8N584 583 aa21.15■□□□□ 0.98
PDLIM2-207ENST00000409417 TDRD5Q8NAT2 981 aaKnown RBP21.15■□□□□ 0.98
PDLIM2-207ENST00000409417 LEMD2Q8NC56 503 aa21.15■□□□□ 0.98
PDLIM2-207ENST00000409417 LMO3Q8TAP4 145 aa21.15■□□□□ 0.98
PDLIM2-207ENST00000409417 CILPO75339 1184 aa21.14■□□□□ 0.98
PDLIM2-207ENST00000409417 EPHA5P54756 1037 aa21.14■□□□□ 0.98
PDLIM2-207ENST00000409417 RPL10AP62906 217 aaKnown RBP21.14■□□□□ 0.98
PDLIM2-207ENST00000409417 CYP27A1Q02318 531 aa21.14■□□□□ 0.98
PDLIM2-207ENST00000409417 VSTM1Q6UX27 236 aa21.14■□□□□ 0.98
PDLIM2-207ENST00000409417 ACOT1Q86TX2 421 aa21.14■□□□□ 0.98
PDLIM2-207ENST00000409417 ITIH5Q86UX2 942 aa21.14■□□□□ 0.98
PDLIM2-207ENST00000409417 PLCD3Q8N3E9 789 aa21.14■□□□□ 0.98
PDLIM2-207ENST00000409417 PSMG2Q969U7 264 aa21.14■□□□□ 0.98
PDLIM2-207ENST00000409417 SAMSN1Q9NSI8 373 aaKnown RBP21.14■□□□□ 0.98
PDLIM2-207ENST00000409417 HMGXB4Q9UGU5 601 aa21.14■□□□□ 0.98
PDLIM2-207ENST00000409417 CD58P19256 250 aa21.13■□□□□ 0.97
PDLIM2-207ENST00000409417 CUL2Q13617 745 aa21.13■□□□□ 0.97
PDLIM2-207ENST00000409417 VEPH1Q14D04 833 aa21.13■□□□□ 0.97
PDLIM2-207ENST00000409417 CYP4A22Q5TCH4 519 aa21.13■□□□□ 0.97
PDLIM2-207ENST00000409417 DNAJB7Q7Z6W7 309 aaPredicted RBP21.13■□□□□ 0.97
PDLIM2-207ENST00000409417 ZDHHC14Q8IZN3 488 aa21.13■□□□□ 0.97
PDLIM2-207ENST00000409417 EHBP1Q8NDI1 1231 aa21.13■□□□□ 0.97
PDLIM2-207ENST00000409417 FAM200AQ8TCP9 573 aa21.13■□□□□ 0.97
PDLIM2-207ENST00000409417 ARID3AQ99856 593 aa21.13■□□□□ 0.97
PDLIM2-207ENST00000409417 LPIN3Q9BQK8 851 aa21.13■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 62.7 ms