RNA–Protein interactions for RNA: ENST00000409292.5

LSM5-202, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2 BASIC

Gene LSM5, Length 538 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-202ENST00000409292 TIMM13Q9Y5L4 95 aaPredicted RBP8.39□□□□□ -1.07
LSM5-202ENST00000409292 CITO14578 2027 aa8.39□□□□□ -1.07
LSM5-202ENST00000409292 TICRRQ7Z2Z1 1910 aa8.39□□□□□ -1.07
LSM5-202ENST00000409292 MTMR11A4FU01 709 aa8.38□□□□□ -1.07
LSM5-202ENST00000409292 SHISA7A6NL88 538 aa8.38□□□□□ -1.07
LSM5-202ENST00000409292 E9PMD0 336 aa8.38□□□□□ -1.07
LSM5-202ENST00000409292 ARNTLO00327 626 aa8.38□□□□□ -1.07
LSM5-202ENST00000409292 HNRNPDLO14979 420 aaKnown RBP8.38□□□□□ -1.07
LSM5-202ENST00000409292 SIAH2O43255 324 aa8.38□□□□□ -1.07
LSM5-202ENST00000409292 JAK2O60674 1132 aa8.38□□□□□ -1.07
LSM5-202ENST00000409292 EDN1P05305 212 aa8.38□□□□□ -1.07
LSM5-202ENST00000409292 KRT18P05783 430 aaKnown RBP8.38□□□□□ -1.07
LSM5-202ENST00000409292 CXCL8P10145 99 aa8.38□□□□□ -1.07
LSM5-202ENST00000409292 IGFBP6P24592 240 aaPredicted RBP8.38□□□□□ -1.07
LSM5-202ENST00000409292 PMLP29590 882 aa8.38□□□□□ -1.07
LSM5-202ENST00000409292 GBP1P32455 592 aa8.38□□□□□ -1.07
LSM5-202ENST00000409292 MPLP40238 635 aa8.38□□□□□ -1.07
LSM5-202ENST00000409292 SH3BP2P78314 561 aa8.38□□□□□ -1.07
LSM5-202ENST00000409292 TSPY1Q01534 308 aa8.38□□□□□ -1.07
LSM5-202ENST00000409292 MCL1Q07820 350 aa8.38□□□□□ -1.07
LSM5-202ENST00000409292 RUNX3Q13761 415 aa8.38□□□□□ -1.07
LSM5-202ENST00000409292 CCINQ13939 588 aa8.38□□□□□ -1.07
LSM5-202ENST00000409292 GAS6Q14393 721 aa8.38□□□□□ -1.07
LSM5-202ENST00000409292 PDGFRLQ15198 375 aa8.38□□□□□ -1.07
LSM5-202ENST00000409292 N4BP2L1Q5TBK1 243 aaPredicted RBP8.38□□□□□ -1.07
LSM5-202ENST00000409292 RINT1Q6NUQ1 792 aa8.38□□□□□ -1.07
LSM5-202ENST00000409292 LYPD8Q6UX82 237 aa8.38□□□□□ -1.07
LSM5-202ENST00000409292 TMC8Q8IU68 726 aa8.38□□□□□ -1.07
LSM5-202ENST00000409292 CPA6Q8N4T0 437 aa8.38□□□□□ -1.07
LSM5-202ENST00000409292 RASSF8Q8NHQ8 419 aa8.38□□□□□ -1.07
LSM5-202ENST00000409292 GKN1Q9NS71 199 aa8.38□□□□□ -1.07
LSM5-202ENST00000409292 UXTQ9UBK9 157 aaPredicted RBP8.38□□□□□ -1.07
LSM5-202ENST00000409292 TUBGCP4Q9UGJ1 667 aa8.38□□□□□ -1.07
LSM5-202ENST00000409292 LIMCH1Q9UPQ0 1083 aa8.38□□□□□ -1.07
LSM5-202ENST00000409292 COL4A3Q01955 1670 aa8.37□□□□□ -1.07
LSM5-202ENST00000409292 TRIP11Q15643 1979 aa8.37□□□□□ -1.07
LSM5-202ENST00000409292 MAP1BP46821 2468 aaKnown RBP8.37□□□□□ -1.07
LSM5-202ENST00000409292 TMEM8BA6NDV4 472 aa8.37□□□□□ -1.07
LSM5-202ENST00000409292 KHNYNO15037 678 aaKnown RBP8.37□□□□□ -1.07
LSM5-202ENST00000409292 OGTO15294 1046 aa8.37□□□□□ -1.07
LSM5-202ENST00000409292 DTNBO60941 627 aa8.37□□□□□ -1.07
LSM5-202ENST00000409292 KCNK5O95279 499 aa8.37□□□□□ -1.07
LSM5-202ENST00000409292 APBB3O95704 486 aa8.37□□□□□ -1.07
LSM5-202ENST00000409292 NEFLP07196 543 aa8.37□□□□□ -1.07
LSM5-202ENST00000409292 PROS1P07225 676 aa8.37□□□□□ -1.07
LSM5-202ENST00000409292 OR4Q2P0C623 313 aa8.37□□□□□ -1.07
LSM5-202ENST00000409292 PRPHP41219 470 aa8.37□□□□□ -1.07
LSM5-202ENST00000409292 DPP6P42658 865 aa8.37□□□□□ -1.07
LSM5-202ENST00000409292 IFNAR2P48551 515 aa8.37□□□□□ -1.07
LSM5-202ENST00000409292 AARSP49588 968 aaKnown RBP eCLIP8.37□□□□□ -1.07
LSM5-202ENST00000409292 PDE6CP51160 858 aa8.37□□□□□ -1.07
LSM5-202ENST00000409292 NOVA1P51513 510 aaKnown RBP8.37□□□□□ -1.07
LSM5-202ENST00000409292 CREB5Q02930 508 aa8.37□□□□□ -1.07
LSM5-202ENST00000409292 PSMD2Q13200 908 aa8.37□□□□□ -1.07
LSM5-202ENST00000409292 SF3A2Q15428 464 aaKnown RBP8.37□□□□□ -1.07
LSM5-202ENST00000409292 NFE2Q16621 373 aaPredicted RBP8.37□□□□□ -1.07
LSM5-202ENST00000409292 TUSC1Q2TAM9 212 aa8.37□□□□□ -1.07
LSM5-202ENST00000409292 SLC39A12Q504Y0 691 aa8.37□□□□□ -1.07
LSM5-202ENST00000409292 SEZ6Q53EL9 994 aa8.37□□□□□ -1.07
LSM5-202ENST00000409292 USP39Q53GS9 565 aaKnown RBP8.37□□□□□ -1.07
LSM5-202ENST00000409292 LMBRD2Q68DH5 695 aaPredicted RBP8.37□□□□□ -1.07
LSM5-202ENST00000409292 TXNDC11Q6PKC3 985 aa8.37□□□□□ -1.07
LSM5-202ENST00000409292 CMTM8Q8IZV2 173 aa8.37□□□□□ -1.07
LSM5-202ENST00000409292 IGSF22Q8N9C0 903 aa8.37□□□□□ -1.07
LSM5-202ENST00000409292 FSIP1Q8NA03 581 aa8.37□□□□□ -1.07
LSM5-202ENST00000409292 ATAD1Q8NBU5 361 aa8.37□□□□□ -1.07
LSM5-202ENST00000409292 FBXO18Q8NFZ0 1043 aa8.37□□□□□ -1.07
LSM5-202ENST00000409292 HPS1Q92902 700 aa8.37□□□□□ -1.07
LSM5-202ENST00000409292 CALML4Q96GE6 196 aa8.37□□□□□ -1.07
LSM5-202ENST00000409292 ZFYVE19Q96K21 471 aa8.37□□□□□ -1.07
LSM5-202ENST00000409292 ZBTB45Q96K62 511 aaPredicted RBP8.37□□□□□ -1.07
LSM5-202ENST00000409292 ZC3H10Q96K80 434 aaKnown RBP8.37□□□□□ -1.07
LSM5-202ENST00000409292 SENP8Q96LD8 212 aa8.37□□□□□ -1.07
LSM5-202ENST00000409292 ZSCAN31Q96LW9 406 aaPredicted RBP8.37□□□□□ -1.07
LSM5-202ENST00000409292 P2RY13Q9BPV8 354 aa8.37□□□□□ -1.07
LSM5-202ENST00000409292 EDEM2Q9BV94 578 aa8.37□□□□□ -1.07
LSM5-202ENST00000409292 LSM14BQ9BX40 385 aaKnown RBP8.37□□□□□ -1.07
LSM5-202ENST00000409292 ATP13A2Q9NQ11 1180 aa8.37□□□□□ -1.07
LSM5-202ENST00000409292 SH2B1Q9NRF2 756 aaPredicted RBP8.37□□□□□ -1.07
LSM5-202ENST00000409292 DERAQ9Y315 318 aa8.37□□□□□ -1.07
LSM5-202ENST00000409292 WASF2Q9Y6W5 498 aa8.37□□□□□ -1.07
LSM5-202ENST00000409292 VPS13AQ96RL7 3174 aa8.37□□□□□ -1.07
LSM5-202ENST00000409292 DCHS1Q96JQ0 3298 aa8.36□□□□□ -1.07
LSM5-202ENST00000409292 SDK1Q7Z5N4 2213 aa8.36□□□□□ -1.07
LSM5-202ENST00000409292 TTC26A0AVF1 554 aa8.36□□□□□ -1.07
LSM5-202ENST00000409292 SFI1A8K8P3 1242 aa8.36□□□□□ -1.07
LSM5-202ENST00000409292 TRDMT1O14717 391 aaKnown RBP8.36□□□□□ -1.07
LSM5-202ENST00000409292 SLC26A4O43511 780 aa8.36□□□□□ -1.07
LSM5-202ENST00000409292 EXTL3O43909 919 aa8.36□□□□□ -1.07
LSM5-202ENST00000409292 TBCAO75347 108 aaKnown RBP8.36□□□□□ -1.07
LSM5-202ENST00000409292 ALDH1A2O94788 518 aa8.36□□□□□ -1.07
LSM5-202ENST00000409292 FAM13AO94988 1023 aa8.36□□□□□ -1.07
LSM5-202ENST00000409292 CAVIN2O95810 425 aa8.36□□□□□ -1.07
LSM5-202ENST00000409292 CSH1P0DML2 217 aa8.36□□□□□ -1.07
LSM5-202ENST00000409292 CSH2P0DML3 217 aa8.36□□□□□ -1.07
LSM5-202ENST00000409292 MAPTP10636 758 aaKnown RBP8.36□□□□□ -1.07
LSM5-202ENST00000409292 VARSP26640 1264 aaKnown RBP8.36□□□□□ -1.07
LSM5-202ENST00000409292 RAP1GAPP47736 663 aa8.36□□□□□ -1.07
LSM5-202ENST00000409292 PXNP49023 591 aaPredicted RBP8.36□□□□□ -1.07
LSM5-202ENST00000409292 TAF6P49848 677 aa8.36□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms