RNA–Protein interactions for RNA: ENST00000409190.7

SYNC-202, Transcript of syncoilin, intermediate filament protein, humanhuman

APPRIS P3 TSL 2 BASIC

Gene SYNC, Length 3,398 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNC-202ENST00000409190 DGAT1O75907 488 aa17.7■□□□□ 0.42
SYNC-202ENST00000409190 DCTN3O75935 186 aa17.7■□□□□ 0.42
SYNC-202ENST00000409190 SERPINB3P29508 390 aa17.7■□□□□ 0.42
SYNC-202ENST00000409190 SFNP31947 248 aa17.7■□□□□ 0.42
SYNC-202ENST00000409190 PLEKHA7Q6IQ23 1121 aa17.7■□□□□ 0.42
SYNC-202ENST00000409190 NPNTQ6UXI9 565 aa17.7■□□□□ 0.42
SYNC-202ENST00000409190 THNSL1Q8IYQ7 743 aa17.7■□□□□ 0.42
SYNC-202ENST00000409190 RCOR2Q8IZ40 523 aa17.7■□□□□ 0.42
SYNC-202ENST00000409190 JOSD2Q8TAC2 188 aa17.7■□□□□ 0.42
SYNC-202ENST00000409190 EURLQ9NYK6 297 aa17.7■□□□□ 0.42
SYNC-202ENST00000409190 LYPLA2O95372 231 aa17.7■□□□□ 0.42
SYNC-202ENST00000409190 PTDSS1P48651 473 aaKnown RBP17.7■□□□□ 0.42
SYNC-202ENST00000409190 VCPP55072 806 aaKnown RBP17.7■□□□□ 0.42
SYNC-202ENST00000409190 FSTL1Q12841 308 aa17.7■□□□□ 0.42
SYNC-202ENST00000409190 NR1H3Q13133 447 aa17.7■□□□□ 0.42
SYNC-202ENST00000409190 RCN2Q14257 317 aa17.7■□□□□ 0.42
SYNC-202ENST00000409190 CDO1Q16878 200 aa17.7■□□□□ 0.42
SYNC-202ENST00000409190 KHDC1Q4VXA5 237 aaKnown RBP17.7■□□□□ 0.42
SYNC-202ENST00000409190 RFX6Q8HWS3 928 aa17.7■□□□□ 0.42
SYNC-202ENST00000409190 CFAP36Q96G28 342 aa17.7■□□□□ 0.42
SYNC-202ENST00000409190 ARL8BQ9NVJ2 186 aa17.7■□□□□ 0.42
SYNC-202ENST00000409190 TRPC5Q9UL62 973 aaPredicted RBP17.7■□□□□ 0.42
SYNC-202ENST00000409190 IKBKGQ9Y6K9 419 aa17.7■□□□□ 0.42
SYNC-202ENST00000409190 GRAP2O75791 330 aa17.69■□□□□ 0.42
SYNC-202ENST00000409190 BGNP21810 368 aa17.69■□□□□ 0.42
SYNC-202ENST00000409190 GNPTABQ3T906 1256 aa17.69■□□□□ 0.42
SYNC-202ENST00000409190 SPDYE2Q495Y8 402 aa17.69■□□□□ 0.42
SYNC-202ENST00000409190 RNASEH2BQ5TBB1 312 aaKnown RBP17.69■□□□□ 0.42
SYNC-202ENST00000409190 UNC45BQ8IWX7 931 aa17.69■□□□□ 0.42
SYNC-202ENST00000409190 VPS52Q8N1B4 723 aa17.69■□□□□ 0.42
SYNC-202ENST00000409190 TFAP2BQ92481 460 aa17.69■□□□□ 0.42
SYNC-202ENST00000409190 ZBTB10Q96DT7 871 aa17.69■□□□□ 0.42
SYNC-202ENST00000409190 ZNF395Q9H8N7 513 aaPredicted RBP17.69■□□□□ 0.42
SYNC-202ENST00000409190 ZNF831Q5JPB2 1677 aa17.69■□□□□ 0.42
SYNC-202ENST00000409190 ZNFX1Q9P2E3 1918 aaKnown RBP17.69■□□□□ 0.42
SYNC-202ENST00000409190 TCEA3O75764 348 aa17.69■□□□□ 0.42
SYNC-202ENST00000409190 CALB2P22676 271 aa17.69■□□□□ 0.42
SYNC-202ENST00000409190 PSEN1P49768 467 aa17.69■□□□□ 0.42
SYNC-202ENST00000409190 YARSP54577 528 aaKnown RBP17.69■□□□□ 0.42
SYNC-202ENST00000409190 CDH8P55286 799 aa17.69■□□□□ 0.42
SYNC-202ENST00000409190 SLC8A3P57103 927 aa17.69■□□□□ 0.42
SYNC-202ENST00000409190 GEMIN4P57678 1058 aaKnown RBP17.69■□□□□ 0.42
SYNC-202ENST00000409190 TFDP3Q5H9I0 405 aa17.69■□□□□ 0.42
SYNC-202ENST00000409190 MCUR1Q96AQ8 359 aa17.69■□□□□ 0.42
SYNC-202ENST00000409190 TRIM56Q9BRZ2 755 aaKnown RBP17.69■□□□□ 0.42
SYNC-202ENST00000409190 MECRQ9BV79 373 aa17.69■□□□□ 0.42
SYNC-202ENST00000409190 LRMDAQ9H2I8 198 aa17.69■□□□□ 0.42
SYNC-202ENST00000409190 SLC9A2Q9UBY0 812 aa17.69■□□□□ 0.42
SYNC-202ENST00000409190 hCG_1818297A0A087WSY0 165 aa17.68■□□□□ 0.42
SYNC-202ENST00000409190 TMEM191CA6NGB0 347 aa17.68■□□□□ 0.42
SYNC-202ENST00000409190 PSAPP07602 524 aa17.68■□□□□ 0.42
SYNC-202ENST00000409190 TMEM191BP0C7N4 346 aa17.68■□□□□ 0.42
SYNC-202ENST00000409190 TPBGLP0DKB5 382 aa17.68■□□□□ 0.42
SYNC-202ENST00000409190 TROVE2P10155 538 aaKnown RBP eCLIP17.68■□□□□ 0.42
SYNC-202ENST00000409190 TUBP50607 506 aa17.68■□□□□ 0.42
SYNC-202ENST00000409190 LMNB2Q03252 620 aa17.68■□□□□ 0.42
SYNC-202ENST00000409190 SAMD3Q8N6K7 520 aa17.68■□□□□ 0.42
SYNC-202ENST00000409190 MCPH1Q8NEM0 835 aa17.68■□□□□ 0.42
SYNC-202ENST00000409190 STK32AQ8WU08 396 aa17.68■□□□□ 0.42
SYNC-202ENST00000409190 MIPEPQ99797 713 aa17.68■□□□□ 0.42
SYNC-202ENST00000409190 SLC13A1Q9BZW2 595 aa17.68■□□□□ 0.42
SYNC-202ENST00000409190 XPO7Q9UIA9 1087 aaKnown RBP17.68■□□□□ 0.42
SYNC-202ENST00000409190 CSDE1O75534 798 aaKnown RBP17.68■□□□□ 0.42
SYNC-202ENST00000409190 KRT36O76013 467 aa17.68■□□□□ 0.42
SYNC-202ENST00000409190 RGS20O76081 388 aa17.68■□□□□ 0.42
SYNC-202ENST00000409190 TMEM63AO94886 807 aa17.68■□□□□ 0.42
SYNC-202ENST00000409190 GARTP22102 1010 aa17.68■□□□□ 0.42
SYNC-202ENST00000409190 IL1R2P27930 398 aa17.68■□□□□ 0.42
SYNC-202ENST00000409190 MMRN1Q13201 1228 aa17.68■□□□□ 0.42
SYNC-202ENST00000409190 PSMD6Q15008 389 aa17.68■□□□□ 0.42
SYNC-202ENST00000409190 CYP39A1Q9NYL5 469 aa17.68■□□□□ 0.42
SYNC-202ENST00000409190 UBR3Q6ZT12 1888 aa17.68■□□□□ 0.42
SYNC-202ENST00000409190 WNT10BO00744 389 aa17.68■□□□□ 0.42
SYNC-202ENST00000409190 PMM2O15305 246 aa17.68■□□□□ 0.42
SYNC-202ENST00000409190 STAM2O75886 525 aa17.68■□□□□ 0.42
SYNC-202ENST00000409190 MT-ND3P03897 115 aa17.68■□□□□ 0.42
SYNC-202ENST00000409190 CCND2P30279 289 aa17.68■□□□□ 0.42
SYNC-202ENST00000409190 PTP4A2Q12974 167 aa17.68■□□□□ 0.42
SYNC-202ENST00000409190 RCN1Q15293 331 aa17.68■□□□□ 0.42
SYNC-202ENST00000409190 IGDCC3Q8IVU1 814 aa17.68■□□□□ 0.42
SYNC-202ENST00000409190 AGGF1Q8N302 714 aaeCLIP17.68■□□□□ 0.42
SYNC-202ENST00000409190 MAB21L3Q8N8X9 362 aa17.68■□□□□ 0.42
SYNC-202ENST00000409190 CPT1BQ92523 772 aa17.68■□□□□ 0.42
SYNC-202ENST00000409190 SMG5Q9UPR3 1016 aaKnown RBP17.68■□□□□ 0.42
SYNC-202ENST00000409190 LTBP1Q14766 1721 aa17.68■□□□□ 0.42
SYNC-202ENST00000409190 SLX4Q8IY92 1834 aa17.67■□□□□ 0.42
SYNC-202ENST00000409190 EME2A4GXA9 379 aaPredicted RBP17.67■□□□□ 0.42
SYNC-202ENST00000409190 LPXNO60711 386 aa17.67■□□□□ 0.42
SYNC-202ENST00000409190 MMP8P22894 467 aa17.67■□□□□ 0.42
SYNC-202ENST00000409190 HSPA1LP34931 641 aa17.67■□□□□ 0.42
SYNC-202ENST00000409190 RPL22P35268 128 aaKnown RBP17.67■□□□□ 0.42
SYNC-202ENST00000409190 TRPC3Q13507 836 aa17.67■□□□□ 0.42
SYNC-202ENST00000409190 KPNB1Q14974 876 aaKnown RBP17.67■□□□□ 0.42
SYNC-202ENST00000409190 RAB6CQ53S08 254 aa17.67■□□□□ 0.42
SYNC-202ENST00000409190 C15orf39Q6ZRI6 1047 aa17.67■□□□□ 0.42
SYNC-202ENST00000409190 CLNKQ7Z7G1 428 aa17.67■□□□□ 0.42
SYNC-202ENST00000409190 ZNF677Q86XU0 584 aa17.67■□□□□ 0.42
SYNC-202ENST00000409190 TTC25Q96NG3 672 aa17.67■□□□□ 0.42
SYNC-202ENST00000409190 RAB6CQ9H0N0 254 aa17.67■□□□□ 0.42
SYNC-202ENST00000409190 MANSC1Q9H8J5 431 aa17.67■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms