RNA–Protein interactions for RNA: ENST00000409031.5

SMPD4-202, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMPD4, Length 4,896 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-202ENST00000409031 TRAF7Q6Q0C0 670 aa18.41■□□□□ 0.54
SMPD4-202ENST00000409031 TMEM79Q9BSE2 394 aa18.41■□□□□ 0.54
SMPD4-202ENST00000409031 MAGEB5Q9BZ81 275 aa18.41■□□□□ 0.54
SMPD4-202ENST00000409031 NRDE2Q9H7Z3 1164 aa18.41■□□□□ 0.54
SMPD4-202ENST00000409031 ZBTB39O15060 712 aa18.41■□□□□ 0.54
SMPD4-202ENST00000409031 AKAP3O75969 853 aa18.41■□□□□ 0.54
SMPD4-202ENST00000409031 BCL10O95999 233 aa18.41■□□□□ 0.54
SMPD4-202ENST00000409031 KCNV1Q6PIU1 500 aa18.41■□□□□ 0.54
SMPD4-202ENST00000409031 CCDC103Q8IW40 242 aa18.41■□□□□ 0.54
SMPD4-202ENST00000409031 FAM71DQ8N9W8 422 aa18.41■□□□□ 0.54
SMPD4-202ENST00000409031 NMRK1Q9NWW6 199 aa18.41■□□□□ 0.54
SMPD4-202ENST00000409031 SCN3BQ9NY72 215 aa18.41■□□□□ 0.54
SMPD4-202ENST00000409031 MTMR4Q9NYA4 1195 aa18.41■□□□□ 0.54
SMPD4-202ENST00000409031 PCYOX1Q9UHG3 505 aa18.41■□□□□ 0.54
SMPD4-202ENST00000409031 VIRMAQ69YN4 1812 aaKnown RBP18.41■□□□□ 0.54
SMPD4-202ENST00000409031 PTPRMP28827 1452 aa18.4■□□□□ 0.54
SMPD4-202ENST00000409031 PSMA4P25789 261 aaKnown RBP18.4■□□□□ 0.54
SMPD4-202ENST00000409031 PRKCIP41743 596 aa18.4■□□□□ 0.54
SMPD4-202ENST00000409031 EARS2Q5JPH6 523 aaKnown RBP18.4■□□□□ 0.54
SMPD4-202ENST00000409031 RIN3Q8TB24 985 aa18.4■□□□□ 0.54
SMPD4-202ENST00000409031 DCLK3Q9C098 648 aa18.4■□□□□ 0.54
SMPD4-202ENST00000409031 PYGMP11217 842 aa18.4■□□□□ 0.54
SMPD4-202ENST00000409031 DUOXA2Q1HG44 320 aa18.4■□□□□ 0.54
SMPD4-202ENST00000409031 CLVS1Q8IUQ0 354 aaPredicted RBP18.4■□□□□ 0.54
SMPD4-202ENST00000409031 GALNT15Q8N3T1 639 aa18.4■□□□□ 0.54
SMPD4-202ENST00000409031 TBRG4Q969Z0 631 aaKnown RBP eCLIP18.4■□□□□ 0.546e-7■■■□□ 15.7
SMPD4-202ENST00000409031 KCNK4Q9NYG8 393 aa18.4■□□□□ 0.54
SMPD4-202ENST00000409031 SORCS3Q9UPU3 1222 aa18.4■□□□□ 0.54
SMPD4-202ENST00000409031 TBC1D12O60347 775 aa18.4■□□□□ 0.54
SMPD4-202ENST00000409031 CBFA2T3O75081 653 aa18.4■□□□□ 0.54
SMPD4-202ENST00000409031 SGPL1O95470 568 aa18.4■□□□□ 0.54
SMPD4-202ENST00000409031 CASP4P49662 377 aa18.4■□□□□ 0.54
SMPD4-202ENST00000409031 DGCR14Q96DF8 476 aaKnown RBP18.4■□□□□ 0.54
SMPD4-202ENST00000409031 PCDHA3Q9Y5H8 950 aa18.4■□□□□ 0.54
SMPD4-202ENST00000409031 USP1O94782 785 aa18.4■□□□□ 0.54
SMPD4-202ENST00000409031 POLBP06746 335 aa18.4■□□□□ 0.54
SMPD4-202ENST00000409031 CIITAP33076 1130 aa18.4■□□□□ 0.54
SMPD4-202ENST00000409031 TNFAIP1Q13829 316 aa18.4■□□□□ 0.54
SMPD4-202ENST00000409031 SMAD1Q15797 465 aaKnown RBP18.4■□□□□ 0.54
SMPD4-202ENST00000409031 PDK4Q16654 411 aa18.4■□□□□ 0.54
SMPD4-202ENST00000409031 KYQ8NBH2 561 aa18.4■□□□□ 0.54
SMPD4-202ENST00000409031 SLC5A5Q92911 643 aa18.4■□□□□ 0.54
SMPD4-202ENST00000409031 GRIP2Q9C0E4 1043 aa18.4■□□□□ 0.54
SMPD4-202ENST00000409031 ARMCX1Q9P291 453 aa18.4■□□□□ 0.54
SMPD4-202ENST00000409031 SAC3D1A6NKF1 404 aa18.39■□□□□ 0.54
SMPD4-202ENST00000409031 DNALI1O14645 258 aaPredicted RBP18.39■□□□□ 0.54
SMPD4-202ENST00000409031 NR1H2P55055 460 aa18.39■□□□□ 0.54
SMPD4-202ENST00000409031 MAPK6Q16659 721 aa18.39■□□□□ 0.54
SMPD4-202ENST00000409031 DNAAF5Q86Y56 855 aa18.39■□□□□ 0.54
SMPD4-202ENST00000409031 ECSITQ9BQ95 431 aa18.39■□□□□ 0.54
SMPD4-202ENST00000409031 FSD1LQ9BXM9 530 aa18.39■□□□□ 0.54
SMPD4-202ENST00000409031 PLGRKTQ9HBL7 147 aa18.39■□□□□ 0.54
SMPD4-202ENST00000409031 A0A087WXM4 84 aa18.39■□□□□ 0.53
SMPD4-202ENST00000409031 PROSCO94903 275 aa18.39■□□□□ 0.53
SMPD4-202ENST00000409031 DLGAP3O95886 979 aa18.39■□□□□ 0.53
SMPD4-202ENST00000409031 CNTFP26441 200 aa18.39■□□□□ 0.53
SMPD4-202ENST00000409031 SSTR3P32745 418 aaPredicted RBP18.39■□□□□ 0.53
SMPD4-202ENST00000409031 TTKP33981 857 aa18.39■□□□□ 0.53
SMPD4-202ENST00000409031 MRPL28Q13084 256 aaKnown RBP18.39■□□□□ 0.53
SMPD4-202ENST00000409031 USP10Q14694 798 aaKnown RBP18.39■□□□□ 0.53
SMPD4-202ENST00000409031 FAM13CQ8NE31 585 aa18.39■□□□□ 0.53
SMPD4-202ENST00000409031 OR6Y1Q8NGX8 325 aa18.39■□□□□ 0.53
SMPD4-202ENST00000409031 F5H6K3 240 aa18.39■□□□□ 0.53
SMPD4-202ENST00000409031 SLC37A4O43826 429 aa18.39■□□□□ 0.53
SMPD4-202ENST00000409031 SP100P23497 879 aaPredicted RBP18.39■□□□□ 0.53
SMPD4-202ENST00000409031 KLRC3Q07444 240 aa18.39■□□□□ 0.53
SMPD4-202ENST00000409031 GRAPQ13588 217 aa18.39■□□□□ 0.53
SMPD4-202ENST00000409031 CAPRIN1Q14444 709 aaKnown RBP18.39■□□□□ 0.53
SMPD4-202ENST00000409031 PDPK2PQ6A1A2 396 aa18.39■□□□□ 0.53
SMPD4-202ENST00000409031 GRAPLQ8TC17 118 aaPredicted RBP18.39■□□□□ 0.53
SMPD4-202ENST00000409031 DCUN1D5Q9BTE7 237 aa18.39■□□□□ 0.53
SMPD4-202ENST00000409031 PCDH9Q9HC56 1237 aa18.39■□□□□ 0.53
SMPD4-202ENST00000409031 DAPK2Q9UIK4 370 aa18.39■□□□□ 0.53
SMPD4-202ENST00000409031 KANSL1LA0AUZ9 987 aa18.39■□□□□ 0.53
SMPD4-202ENST00000409031 F5H423 210 aaPredicted RBP18.39■□□□□ 0.53
SMPD4-202ENST00000409031 ATP9BO43861 1147 aa18.39■□□□□ 0.53
SMPD4-202ENST00000409031 WDR47O94967 919 aa18.39■□□□□ 0.53
SMPD4-202ENST00000409031 RTN3O95197 1032 aaPredicted RBP18.39■□□□□ 0.53
SMPD4-202ENST00000409031 GPC3P51654 580 aa18.39■□□□□ 0.53
SMPD4-202ENST00000409031 PTK6Q13882 451 aa18.39■□□□□ 0.53
SMPD4-202ENST00000409031 TFDP3Q5H9I0 405 aa18.39■□□□□ 0.53
SMPD4-202ENST00000409031 RNF135Q8IUD6 432 aa18.39■□□□□ 0.53
SMPD4-202ENST00000409031 NUP93Q8N1F7 819 aa18.39■□□□□ 0.53
SMPD4-202ENST00000409031 APOPT1Q96IL0 206 aa18.39■□□□□ 0.53
SMPD4-202ENST00000409031 STAP1Q9ULZ2 295 aa18.39■□□□□ 0.53
SMPD4-202ENST00000409031 AXIN2Q9Y2T1 843 aa18.39■□□□□ 0.53
SMPD4-202ENST00000409031 ARAP3Q8WWN8 1544 aa18.39■□□□□ 0.53
SMPD4-202ENST00000409031 SPDYE16A6NNV3 312 aaPredicted RBP18.38■□□□□ 0.53
SMPD4-202ENST00000409031 SNX2O60749 519 aa18.38■□□□□ 0.53
SMPD4-202ENST00000409031 H2AFYO75367 372 aaKnown RBP18.38■□□□□ 0.53
SMPD4-202ENST00000409031 VAV1P15498 845 aa18.38■□□□□ 0.53
SMPD4-202ENST00000409031 CYP11B1P15538 503 aa18.38■□□□□ 0.53
SMPD4-202ENST00000409031 ADRA1DP25100 572 aa18.38■□□□□ 0.53
SMPD4-202ENST00000409031 SERPINB5P36952 375 aa18.38■□□□□ 0.53
SMPD4-202ENST00000409031 PDK3Q15120 406 aa18.38■□□□□ 0.53
SMPD4-202ENST00000409031 TRIM60Q495X7 471 aa18.38■□□□□ 0.53
SMPD4-202ENST00000409031 SPDYE2Q495Y8 402 aa18.38■□□□□ 0.53
SMPD4-202ENST00000409031 GCNAQ96QF7 691 aa18.38■□□□□ 0.53
SMPD4-202ENST00000409031 RMI1Q9H9A7 625 aa18.38■□□□□ 0.53
SMPD4-202ENST00000409031 TUBA8Q9NY65 449 aaPredicted RBP18.38■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms