RNA–Protein interactions for RNA: ENST00000408454.1

SNORD88B-201, Transcript of small nucleolar RNA, C/D box 88B, humanhuman

BASIC

Gene SNORD88B, Length 91 nt, Biotype snoRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORD88B-201ENST00000408454 ERMP1Q7Z2K6 904 aa13.78□□□□□ -0.2
SNORD88B-201ENST00000408454 TMC8Q8IU68 726 aa13.78□□□□□ -0.2
SNORD88B-201ENST00000408454 EFCAB13Q8IY85 973 aa13.78□□□□□ -0.2
SNORD88B-201ENST00000408454 ADSSL1Q8N142 457 aa13.78□□□□□ -0.2
SNORD88B-201ENST00000408454 PDCL2Q8N4E4 241 aa13.78□□□□□ -0.2
SNORD88B-201ENST00000408454 C1orf127Q8N9H9 656 aa13.78□□□□□ -0.2
SNORD88B-201ENST00000408454 OR10T2Q8NGX3 314 aa13.78□□□□□ -0.2
SNORD88B-201ENST00000408454 TCEAL4Q96EI5 215 aa13.78□□□□□ -0.2
SNORD88B-201ENST00000408454 TNIP3Q96KP6 325 aa13.78□□□□□ -0.2
SNORD88B-201ENST00000408454 MMS19Q96T76 1030 aa13.78□□□□□ -0.2
SNORD88B-201ENST00000408454 CBWD1Q9BRT8 395 aa13.78□□□□□ -0.2
SNORD88B-201ENST00000408454 RPP25Q9BUL9 199 aaKnown RBP13.78□□□□□ -0.2
SNORD88B-201ENST00000408454 MTMR12Q9C0I1 747 aa13.78□□□□□ -0.2
SNORD88B-201ENST00000408454 CHRDQ9H2X0 955 aa13.78□□□□□ -0.2
SNORD88B-201ENST00000408454 TFIP11Q9UBB9 837 aaKnown RBP13.78□□□□□ -0.2
SNORD88B-201ENST00000408454 MAGEC2Q9UBF1 373 aaPredicted RBP13.78□□□□□ -0.2
SNORD88B-201ENST00000408454 GMEB2Q9UKD1 530 aa13.78□□□□□ -0.2
SNORD88B-201ENST00000408454 FRMD4BQ9Y2L6 1034 aa13.78□□□□□ -0.2
SNORD88B-201ENST00000408454 TRAV19A0A0A6YYK7 116 aa13.77□□□□□ -0.21
SNORD88B-201ENST00000408454 STAU1O95793 577 aaKnown RBP13.77□□□□□ -0.21
SNORD88B-201ENST00000408454 FCARP24071 287 aa13.77□□□□□ -0.21
SNORD88B-201ENST00000408454 CSTF1Q05048 431 aaKnown RBP13.77□□□□□ -0.21
SNORD88B-201ENST00000408454 KCNB1Q14721 858 aa13.77□□□□□ -0.21
SNORD88B-201ENST00000408454 PSMD6Q15008 389 aa13.77□□□□□ -0.21
SNORD88B-201ENST00000408454 E2F4Q16254 413 aa13.77□□□□□ -0.21
SNORD88B-201ENST00000408454 KNOP1Q1ED39 458 aaKnown RBP13.77□□□□□ -0.21
SNORD88B-201ENST00000408454 BMT2Q1RMZ1 405 aa13.77□□□□□ -0.21
SNORD88B-201ENST00000408454 FBXO43Q4G163 708 aa13.77□□□□□ -0.21
SNORD88B-201ENST00000408454 RESP18Q5W5W9 173 aa13.77□□□□□ -0.21
SNORD88B-201ENST00000408454 DDX42Q86XP3 938 aaKnown RBP eCLIP13.77□□□□□ -0.21
SNORD88B-201ENST00000408454 HS6ST3Q8IZP7 471 aa13.77□□□□□ -0.21
SNORD88B-201ENST00000408454 CMTM8Q8IZV2 173 aa13.77□□□□□ -0.21
SNORD88B-201ENST00000408454 SPEM1Q8N4L4 309 aa13.77□□□□□ -0.21
SNORD88B-201ENST00000408454 CPA6Q8N4T0 437 aa13.77□□□□□ -0.21
SNORD88B-201ENST00000408454 SPATA32Q96LK8 384 aa13.77□□□□□ -0.21
SNORD88B-201ENST00000408454 CGRRF1Q99675 332 aa13.77□□□□□ -0.21
SNORD88B-201ENST00000408454 ELOVL4Q9GZR5 314 aa13.77□□□□□ -0.21
SNORD88B-201ENST00000408454 PCIF1Q9H4Z3 704 aa13.77□□□□□ -0.21
SNORD88B-201ENST00000408454 PDE11AQ9HCR9 933 aa13.77□□□□□ -0.21
SNORD88B-201ENST00000408454 AGPAT3Q9NRZ7 376 aa13.77□□□□□ -0.21
SNORD88B-201ENST00000408454 TDP1Q9NUW8 608 aa13.77□□□□□ -0.21
SNORD88B-201ENST00000408454 NDRG2Q9UN36 371 aaKnown RBP13.77□□□□□ -0.21
SNORD88B-201ENST00000408454 MYH15Q9Y2K3 1946 aa13.76□□□□□ -0.21
SNORD88B-201ENST00000408454 SLC9A3R1O14745 358 aaPredicted RBP13.76□□□□□ -0.21
SNORD88B-201ENST00000408454 CALUO43852 315 aaPredicted RBP13.76□□□□□ -0.21
SNORD88B-201ENST00000408454 TACC1O75410 805 aa13.76□□□□□ -0.21
SNORD88B-201ENST00000408454 CKMP06732 381 aa13.76□□□□□ -0.21
SNORD88B-201ENST00000408454 DLATP10515 647 aaKnown RBP13.76□□□□□ -0.21
SNORD88B-201ENST00000408454 IGFBP6P24592 240 aaPredicted RBP13.76□□□□□ -0.21
SNORD88B-201ENST00000408454 RPL13P26373 211 aaKnown RBP13.76□□□□□ -0.21
SNORD88B-201ENST00000408454 TARSP26639 723 aaKnown RBP13.76□□□□□ -0.21
SNORD88B-201ENST00000408454 CCR2P41597 374 aa13.76□□□□□ -0.21
SNORD88B-201ENST00000408454 CXCL12P48061 93 aa13.76□□□□□ -0.21
SNORD88B-201ENST00000408454 GRSF1Q12849 480 aaKnown RBP eCLIP13.76□□□□□ -0.21
SNORD88B-201ENST00000408454 NUDT18Q6ZVK8 323 aa13.76□□□□□ -0.21
SNORD88B-201ENST00000408454 MON1AQ86VX9 555 aa13.76□□□□□ -0.21
SNORD88B-201ENST00000408454 TTC39CQ8N584 583 aa13.76□□□□□ -0.21
SNORD88B-201ENST00000408454 STKLD1Q8NE28 680 aa13.76□□□□□ -0.21
SNORD88B-201ENST00000408454 PDZD8Q8NEN9 1154 aa13.76□□□□□ -0.21
SNORD88B-201ENST00000408454 LRRC15Q8TF66 581 aa13.76□□□□□ -0.21
SNORD88B-201ENST00000408454 TMEM174Q8WUU8 243 aa13.76□□□□□ -0.21
SNORD88B-201ENST00000408454 TAF4BQ92750 862 aa13.76□□□□□ -0.21
SNORD88B-201ENST00000408454 ATP2A3Q93084 1043 aa13.76□□□□□ -0.21
SNORD88B-201ENST00000408454 SPATA17Q96L03 361 aa13.76□□□□□ -0.21
SNORD88B-201ENST00000408454 MYRFLQ96LU7 910 aa13.76□□□□□ -0.21
SNORD88B-201ENST00000408454 SLITRK1Q96PX8 696 aa13.76□□□□□ -0.21
SNORD88B-201ENST00000408454 SYT15Q9BQS2 421 aa13.76□□□□□ -0.21
SNORD88B-201ENST00000408454 DNAJC25Q9H1X3 360 aa13.76□□□□□ -0.21
SNORD88B-201ENST00000408454 L1RE1Q9UN81 338 aa13.76□□□□□ -0.21
SNORD88B-201ENST00000408454 C5orf42Q9H799 3197 aa13.76□□□□□ -0.21
SNORD88B-201ENST00000408454 MYBPHLA2RUH7 354 aa13.75□□□□□ -0.21
SNORD88B-201ENST00000408454 GOLGA8IPA6NC78 632 aa13.75□□□□□ -0.21
SNORD88B-201ENST00000408454 GOLGA6L4A6NEF3 574 aa13.75□□□□□ -0.21
SNORD88B-201ENST00000408454 GOLGA8JA6NMD2 632 aa13.75□□□□□ -0.21
SNORD88B-201ENST00000408454 TISP43B9A030 160 aa13.75□□□□□ -0.21
SNORD88B-201ENST00000408454 GABRDO14764 452 aa13.75□□□□□ -0.21
SNORD88B-201ENST00000408454 PPEF2O14830 753 aa13.75□□□□□ -0.21
SNORD88B-201ENST00000408454 NOL4O94818 638 aa13.75□□□□□ -0.21
SNORD88B-201ENST00000408454 RPN1P04843 607 aaKnown RBP13.75□□□□□ -0.21
SNORD88B-201ENST00000408454 WARSP23381 471 aaKnown RBP13.75□□□□□ -0.21
SNORD88B-201ENST00000408454 CMA1P23946 247 aa13.75□□□□□ -0.21
SNORD88B-201ENST00000408454 CASP5P51878 434 aa13.75□□□□□ -0.21
SNORD88B-201ENST00000408454 NLRP12P59046 1061 aa13.75□□□□□ -0.21
SNORD88B-201ENST00000408454 FAM160A1Q05DH4 1040 aa13.75□□□□□ -0.21
SNORD88B-201ENST00000408454 ENPEPQ07075 957 aa13.75□□□□□ -0.21
SNORD88B-201ENST00000408454 BIRC3Q13489 604 aa13.75□□□□□ -0.21
SNORD88B-201ENST00000408454 SHC4Q6S5L8 630 aa13.75□□□□□ -0.21
SNORD88B-201ENST00000408454 EPM2AIP1Q7L775 607 aaPredicted RBP13.75□□□□□ -0.21
SNORD88B-201ENST00000408454 ASCL5Q7RTU5 278 aa13.75□□□□□ -0.21
SNORD88B-201ENST00000408454 TRAPPC11Q7Z392 1133 aa13.75□□□□□ -0.21
SNORD88B-201ENST00000408454 FEZF2Q8TBJ5 459 aa13.75□□□□□ -0.21
SNORD88B-201ENST00000408454 PI4K2AQ9BTU6 479 aa13.75□□□□□ -0.21
SNORD88B-201ENST00000408454 LRRC3Q9BY71 257 aa13.75□□□□□ -0.21
SNORD88B-201ENST00000408454 LMAN1LQ9HAT1 526 aa13.75□□□□□ -0.21
SNORD88B-201ENST00000408454 PRMT8Q9NR22 394 aaPredicted RBP13.75□□□□□ -0.21
SNORD88B-201ENST00000408454 TRPM5Q9NZQ8 1165 aa13.75□□□□□ -0.21
SNORD88B-201ENST00000408454 RCOR1Q9UKL0 485 aa13.75□□□□□ -0.21
SNORD88B-201ENST00000408454 MAGED2Q9UNF1 606 aaPredicted RBP13.75□□□□□ -0.21
SNORD88B-201ENST00000408454 MIA3Q5JRA6 1907 aa13.74□□□□□ -0.21
SNORD88B-201ENST00000408454 PRR5-ARHGAP8B1AHC4 643 aa13.74□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms