RNA–Protein interactions for RNA: ENST00000407082.3

SMARCB1-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

TSL 5 BASIC

Gene SMARCB1, Length 1,182 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-203ENST00000407082 BUB1BO60566 1050 aaPredicted RBP13.72□□□□□ -0.21
SMARCB1-203ENST00000407082 LRRN2O75325 713 aa13.72□□□□□ -0.21
SMARCB1-203ENST00000407082 GPR32O75388 356 aa13.72□□□□□ -0.21
SMARCB1-203ENST00000407082 ZMYND10O75800 440 aa13.72□□□□□ -0.21
SMARCB1-203ENST00000407082 ADRB2P07550 413 aa13.72□□□□□ -0.21
SMARCB1-203ENST00000407082 SRGAP2CP0DJJ0 459 aa13.72□□□□□ -0.21
SMARCB1-203ENST00000407082 ABCB4P21439 1286 aa13.72□□□□□ -0.21
SMARCB1-203ENST00000407082 NRIP1P48552 1158 aa13.72□□□□□ -0.21
SMARCB1-203ENST00000407082 LMAN1P49257 510 aa13.72□□□□□ -0.21
SMARCB1-203ENST00000407082 DNA2P51530 1060 aa13.72□□□□□ -0.21
SMARCB1-203ENST00000407082 EFNA5P52803 228 aa13.72□□□□□ -0.21
SMARCB1-203ENST00000407082 CDR2Q01850 454 aa13.72□□□□□ -0.21
SMARCB1-203ENST00000407082 DHX34Q14147 1143 aaKnown RBP13.72□□□□□ -0.21
SMARCB1-203ENST00000407082 FAM26DQ5JW98 314 aa13.72□□□□□ -0.21
SMARCB1-203ENST00000407082 C1orf220Q5T0J3 134 aa13.72□□□□□ -0.21
SMARCB1-203ENST00000407082 LRIG3Q6UXM1 1119 aa13.72□□□□□ -0.21
SMARCB1-203ENST00000407082 CBWD2Q8IUF1 395 aa13.72□□□□□ -0.21
SMARCB1-203ENST00000407082 ARHGEF19Q8IW93 802 aa13.72□□□□□ -0.21
SMARCB1-203ENST00000407082 CD302Q8IX05 232 aa13.72□□□□□ -0.21
SMARCB1-203ENST00000407082 KLHL7Q8IXQ5 586 aa13.72□□□□□ -0.21
SMARCB1-203ENST00000407082 ASAP3Q8TDY4 903 aa13.72□□□□□ -0.21
SMARCB1-203ENST00000407082 NLRP7Q8WX94 980 aa13.72□□□□□ -0.21
SMARCB1-203ENST00000407082 IFT81Q8WYA0 676 aa13.72□□□□□ -0.21
SMARCB1-203ENST00000407082 NLRP4Q96MN2 994 aa13.72□□□□□ -0.21
SMARCB1-203ENST00000407082 FAM129AQ9BZQ8 928 aa13.72□□□□□ -0.21
SMARCB1-203ENST00000407082 IKZF4Q9H2S9 585 aa13.72□□□□□ -0.21
SMARCB1-203ENST00000407082 ADAMTS10Q9H324 1103 aa13.72□□□□□ -0.21
SMARCB1-203ENST00000407082 CDHR5Q9HBB8 845 aa13.72□□□□□ -0.21
SMARCB1-203ENST00000407082 GTF3C4Q9UKN8 822 aa13.72□□□□□ -0.21
SMARCB1-203ENST00000407082 PACSIN2Q9UNF0 486 aaPredicted RBP13.72□□□□□ -0.21
SMARCB1-203ENST00000407082 TRPV2Q9Y5S1 764 aa13.72□□□□□ -0.21
SMARCB1-203ENST00000407082 CFAP54Q96N23 3096 aa13.71□□□□□ -0.21
SMARCB1-203ENST00000407082 A0A087WZ62 844 aa13.71□□□□□ -0.21
SMARCB1-203ENST00000407082 GOLGA6CA6NDK9 693 aa13.71□□□□□ -0.21
SMARCB1-203ENST00000407082 LOC730098B7Z3J9 87 aa13.71□□□□□ -0.21
SMARCB1-203ENST00000407082 SART1O43290 800 aaKnown RBP13.71□□□□□ -0.21
SMARCB1-203ENST00000407082 RAD51CO43502 376 aa13.71□□□□□ -0.21
SMARCB1-203ENST00000407082 RPS6KA5O75582 802 aa13.71□□□□□ -0.21
SMARCB1-203ENST00000407082 SYF2O95926 243 aaKnown RBP13.71□□□□□ -0.21
SMARCB1-203ENST00000407082 GOLGA6DP0CG33 693 aa13.71□□□□□ -0.21
SMARCB1-203ENST00000407082 GLRA2P23416 452 aa13.71□□□□□ -0.21
SMARCB1-203ENST00000407082 TBXAS1P24557 533 aaPredicted RBP13.71□□□□□ -0.21
SMARCB1-203ENST00000407082 ADSSP30520 456 aa13.71□□□□□ -0.21
SMARCB1-203ENST00000407082 ACTN2P35609 894 aa13.71□□□□□ -0.21
SMARCB1-203ENST00000407082 GGCXP38435 758 aa13.71□□□□□ -0.21
SMARCB1-203ENST00000407082 CRYBB1P53674 252 aaPredicted RBP13.71□□□□□ -0.21
SMARCB1-203ENST00000407082 CLDN10P78369 228 aa13.71□□□□□ -0.21
SMARCB1-203ENST00000407082 MGAT3Q09327 533 aa13.71□□□□□ -0.21
SMARCB1-203ENST00000407082 TFDP1Q14186 410 aa13.71□□□□□ -0.21
SMARCB1-203ENST00000407082 HLTFQ14527 1009 aaKnown RBP eCLIP13.71□□□□□ -0.21
SMARCB1-203ENST00000407082 ACAD10Q6JQN1 1059 aa13.71□□□□□ -0.21
SMARCB1-203ENST00000407082 ASCL5Q7RTU5 278 aa13.71□□□□□ -0.21
SMARCB1-203ENST00000407082 CROCCP2Q86T23 111 aa13.71□□□□□ -0.21
SMARCB1-203ENST00000407082 RNF149Q8NC42 400 aa13.71□□□□□ -0.21
SMARCB1-203ENST00000407082 EPS8L1Q8TE68 723 aa13.71□□□□□ -0.21
SMARCB1-203ENST00000407082 APBB2Q92870 758 aa13.71□□□□□ -0.21
SMARCB1-203ENST00000407082 CCDC127Q96BQ5 260 aa13.71□□□□□ -0.21
SMARCB1-203ENST00000407082 SAAL1Q96ER3 474 aa13.71□□□□□ -0.21
SMARCB1-203ENST00000407082 MSLNLQ96KJ4 702 aa13.71□□□□□ -0.21
SMARCB1-203ENST00000407082 OSMRQ99650 979 aa13.71□□□□□ -0.21
SMARCB1-203ENST00000407082 FDXACB1Q9BRP7 624 aaPredicted RBP13.71□□□□□ -0.21
SMARCB1-203ENST00000407082 THAP2Q9H0W7 228 aa13.71□□□□□ -0.21
SMARCB1-203ENST00000407082 C2orf40Q9H1Z8 148 aa13.71□□□□□ -0.21
SMARCB1-203ENST00000407082 GOLGA6AQ9NYA3 693 aa13.71□□□□□ -0.21
SMARCB1-203ENST00000407082 CLEC1BQ9P126 229 aa13.71□□□□□ -0.21
SMARCB1-203ENST00000407082 PARP2Q9UGN5 583 aa13.71□□□□□ -0.21
SMARCB1-203ENST00000407082 AGO2Q9UKV8 859 aaKnown RBP13.71□□□□□ -0.21
SMARCB1-203ENST00000407082 BARX2Q9UMQ3 279 aaPredicted RBP13.71□□□□□ -0.21
SMARCB1-203ENST00000407082 USP15Q9Y4E8 981 aaPredicted RBP13.71□□□□□ -0.21
SMARCB1-203ENST00000407082 RIF1Q5UIP0 2472 aaKnown RBP13.7□□□□□ -0.22
SMARCB1-203ENST00000407082 ADGRA3Q8IWK6 1321 aa13.7□□□□□ -0.22
SMARCB1-203ENST00000407082 PODXLO00592 558 aa13.7□□□□□ -0.22
SMARCB1-203ENST00000407082 DDX3YO15523 660 aaKnown RBP13.7□□□□□ -0.22
SMARCB1-203ENST00000407082 CYP1A2P05177 515 aa13.7□□□□□ -0.22
SMARCB1-203ENST00000407082 GLI1P08151 1106 aa13.7□□□□□ -0.22
SMARCB1-203ENST00000407082 CYP11B1P15538 503 aa13.7□□□□□ -0.22
SMARCB1-203ENST00000407082 LIN9Q5TKA1 542 aa13.7□□□□□ -0.22
SMARCB1-203ENST00000407082 SV2AQ7L0J3 742 aa13.7□□□□□ -0.22
SMARCB1-203ENST00000407082 ADGRD2Q7Z7M1 963 aa13.7□□□□□ -0.22
SMARCB1-203ENST00000407082 ZNF410Q86VK4 478 aa13.7□□□□□ -0.22
SMARCB1-203ENST00000407082 EFHBQ8N7U6 833 aa13.7□□□□□ -0.22
SMARCB1-203ENST00000407082 HELQQ8TDG4 1101 aa13.7□□□□□ -0.22
SMARCB1-203ENST00000407082 MICAL1Q8TDZ2 1067 aa13.7□□□□□ -0.22
SMARCB1-203ENST00000407082 HDAC7Q8WUI4 952 aa13.7□□□□□ -0.22
SMARCB1-203ENST00000407082 SH3GL2Q99962 352 aa13.7□□□□□ -0.22
SMARCB1-203ENST00000407082 PHF7Q9BWX1 381 aaPredicted RBP13.7□□□□□ -0.22
SMARCB1-203ENST00000407082 GCOM2Q9BZD3 368 aaPredicted RBP13.7□□□□□ -0.22
SMARCB1-203ENST00000407082 IMPG2Q9BZV3 1241 aa13.7□□□□□ -0.22
SMARCB1-203ENST00000407082 FAM204AQ9H8W3 233 aa13.7□□□□□ -0.22
SMARCB1-203ENST00000407082 EHD2Q9NZN4 543 aa13.7□□□□□ -0.22
SMARCB1-203ENST00000407082 NFU1Q9UMS0 254 aa13.7□□□□□ -0.22
SMARCB1-203ENST00000407082 PCDHB2Q9Y5E7 798 aa13.7□□□□□ -0.22
SMARCB1-203ENST00000407082 ALG6Q9Y672 507 aa13.7□□□□□ -0.22
SMARCB1-203ENST00000407082 USP34Q70CQ2 3546 aa13.69□□□□□ -0.22
SMARCB1-203ENST00000407082 LRRIQ4A6NIV6 560 aa13.69□□□□□ -0.22
SMARCB1-203ENST00000407082 PDGFBP01127 241 aaPredicted RBP13.69□□□□□ -0.22
SMARCB1-203ENST00000407082 FGGP02679 453 aa13.69□□□□□ -0.22
SMARCB1-203ENST00000407082 MYBL2P10244 700 aa13.69□□□□□ -0.22
SMARCB1-203ENST00000407082 GHRP10912 638 aa13.69□□□□□ -0.22
SMARCB1-203ENST00000407082 TNNI1P19237 187 aa13.69□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms