RNA–Protein interactions for RNA: ENST00000405925.2

LIG4-202, Transcript of DNA ligase 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIG4, Length 4,065 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG4-202ENST00000405925 TBK1Q9UHD2 729 aa9.56□□□□□ -0.88
LIG4-202ENST00000405925 PAPPAQ13219 1627 aa9.56□□□□□ -0.88
LIG4-202ENST00000405925 M0QYT0 321 aa9.56□□□□□ -0.88
LIG4-202ENST00000405925 CST8O60676 142 aa9.56□□□□□ -0.88
LIG4-202ENST00000405925 SLC10A3P09131 477 aa9.56□□□□□ -0.88
LIG4-202ENST00000405925 STX2P32856 288 aa9.56□□□□□ -0.88
LIG4-202ENST00000405925 KCNJ1P48048 391 aa9.56□□□□□ -0.88
LIG4-202ENST00000405925 COG7P83436 770 aa9.56□□□□□ -0.88
LIG4-202ENST00000405925 ELAVL2Q12926 359 aaKnown RBP9.56□□□□□ -0.88
LIG4-202ENST00000405925 PCBP1Q15365 356 aaKnown RBP eCLIP9.56□□□□□ -0.88
LIG4-202ENST00000405925 C10orf120Q5SQS8 335 aa9.56□□□□□ -0.88
LIG4-202ENST00000405925 EMBQ6PCB8 327 aa9.56□□□□□ -0.88
LIG4-202ENST00000405925 EPS8L1Q8TE68 723 aa9.56□□□□□ -0.88
LIG4-202ENST00000405925 ZNF518BQ9C0D4 1074 aa9.56□□□□□ -0.88
LIG4-202ENST00000405925 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP9.56□□□□□ -0.888e-7■■■■■ 73.7
LIG4-202ENST00000405925 DSEQ9UL01 958 aa9.56□□□□□ -0.88
LIG4-202ENST00000405925 PCDHA2Q9Y5H9 948 aa9.56□□□□□ -0.88
LIG4-202ENST00000405925 UMODL1Q5DID0 1318 aa9.55□□□□□ -0.88
LIG4-202ENST00000405925 TADA3O75528 432 aa9.55□□□□□ -0.88
LIG4-202ENST00000405925 KRT14P02533 472 aa9.55□□□□□ -0.88
LIG4-202ENST00000405925 ALDH3A1P30838 453 aa9.55□□□□□ -0.88
LIG4-202ENST00000405925 SERPINB6P35237 376 aa9.55□□□□□ -0.88
LIG4-202ENST00000405925 CLEC16AQ2KHT3 1053 aa9.55□□□□□ -0.88
LIG4-202ENST00000405925 ZNF792Q3KQV3 632 aa9.55□□□□□ -0.88
LIG4-202ENST00000405925 KCNT1Q5JUK3 1230 aa9.55□□□□□ -0.88
LIG4-202ENST00000405925 HP1BP3Q5SSJ5 553 aaPredicted RBP9.55□□□□□ -0.88
LIG4-202ENST00000405925 OLFML2BQ68BL8 750 aa9.55□□□□□ -0.88
LIG4-202ENST00000405925 SLC2A14Q8TDB8 520 aa9.55□□□□□ -0.88
LIG4-202ENST00000405925 LRRC1Q9BTT6 524 aa9.55□□□□□ -0.88
LIG4-202ENST00000405925 STAU2Q9NUL3 570 aaKnown RBP eCLIP9.55□□□□□ -0.88
LIG4-202ENST00000405925 HPCAL4Q9UM19 191 aa9.55□□□□□ -0.88
LIG4-202ENST00000405925 EBAG9O00559 213 aa9.55□□□□□ -0.88
LIG4-202ENST00000405925 LSM8O95777 96 aaKnown RBP9.55□□□□□ -0.88
LIG4-202ENST00000405925 ZFXP17010 805 aaPredicted RBP9.55□□□□□ -0.88
LIG4-202ENST00000405925 GJA5P36382 358 aa9.55□□□□□ -0.88
LIG4-202ENST00000405925 MAPK7Q13164 816 aa9.55□□□□□ -0.88
LIG4-202ENST00000405925 MAPK8IP2Q13387 824 aaPredicted RBP9.55□□□□□ -0.88
LIG4-202ENST00000405925 IKBKEQ14164 716 aa9.55□□□□□ -0.88
LIG4-202ENST00000405925 CASP8Q14790 479 aa9.55□□□□□ -0.88
LIG4-202ENST00000405925 RNF219Q5W0B1 726 aaPredicted RBP9.55□□□□□ -0.88
LIG4-202ENST00000405925 FOXR2Q6PJQ5 311 aa9.55□□□□□ -0.88
LIG4-202ENST00000405925 PID1Q7Z2X4 250 aa9.55□□□□□ -0.88
LIG4-202ENST00000405925 CFAP36Q96G28 342 aa9.55□□□□□ -0.88
LIG4-202ENST00000405925 SGIP1Q9BQI5 828 aa9.55□□□□□ -0.88
LIG4-202ENST00000405925 GANQ9H2C0 597 aa9.55□□□□□ -0.88
LIG4-202ENST00000405925 ST6GALNAC4Q9H4F1 302 aa9.55□□□□□ -0.88
LIG4-202ENST00000405925 SP110Q9HB58 689 aa9.55□□□□□ -0.88
LIG4-202ENST00000405925 C2CD2Q9Y426 696 aa9.55□□□□□ -0.88
LIG4-202ENST00000405925 EXOC1LA0A1B0GW35 172 aa9.55□□□□□ -0.88
LIG4-202ENST00000405925 DFFAO00273 331 aa9.55□□□□□ -0.88
LIG4-202ENST00000405925 GIPC1O14908 333 aa9.55□□□□□ -0.88
LIG4-202ENST00000405925 C22orf31O95567 290 aa9.55□□□□□ -0.88
LIG4-202ENST00000405925 GRM5P41594 1212 aa9.55□□□□□ -0.88
LIG4-202ENST00000405925 BST2Q10589 180 aaKnown RBP9.55□□□□□ -0.88
LIG4-202ENST00000405925 MEA1Q16626 185 aa9.55□□□□□ -0.88
LIG4-202ENST00000405925 ZCWPW2Q504Y3 356 aa9.55□□□□□ -0.88
LIG4-202ENST00000405925 WSCD1Q658N2 575 aa9.55□□□□□ -0.88
LIG4-202ENST00000405925 TADA2BQ86TJ2 420 aa9.55□□□□□ -0.88
LIG4-202ENST00000405925 FAM131BQ86XD5 332 aa9.55□□□□□ -0.88
LIG4-202ENST00000405925 CDKL3Q8IVW4 592 aaPredicted RBP9.55□□□□□ -0.88
LIG4-202ENST00000405925 HELQQ8TDG4 1101 aa9.55□□□□□ -0.88
LIG4-202ENST00000405925 FBXO32Q969P5 355 aa9.55□□□□□ -0.88
LIG4-202ENST00000405925 CARD9Q9H257 536 aa9.55□□□□□ -0.88
LIG4-202ENST00000405925 HIPK3Q9H422 1215 aa9.55□□□□□ -0.88
LIG4-202ENST00000405925 RBM12Q9NTZ6 932 aaKnown RBP9.55□□□□□ -0.88
LIG4-202ENST00000405925 IPO11Q9UI26 975 aaKnown RBP9.55□□□□□ -0.88
LIG4-202ENST00000405925 PADI3Q9ULW8 664 aa9.55□□□□□ -0.88
LIG4-202ENST00000405925 AKAP11Q9UKA4 1901 aa9.54□□□□□ -0.88
LIG4-202ENST00000405925 H7C4K7 107 aa9.54□□□□□ -0.88
LIG4-202ENST00000405925 TTI1O43156 1089 aa9.54□□□□□ -0.88
LIG4-202ENST00000405925 IRF1P10914 325 aa9.54□□□□□ -0.88
LIG4-202ENST00000405925 RECQLP46063 649 aaPredicted RBP9.54□□□□□ -0.88
LIG4-202ENST00000405925 ARSEP51690 589 aa9.54□□□□□ -0.88
LIG4-202ENST00000405925 TKTL1P51854 596 aa9.54□□□□□ -0.88
LIG4-202ENST00000405925 ARL4CP56559 192 aa9.54□□□□□ -0.88
LIG4-202ENST00000405925 MXRA7P84157 204 aa9.54□□□□□ -0.88
LIG4-202ENST00000405925 VPS52Q8N1B4 723 aa9.54□□□□□ -0.88
LIG4-202ENST00000405925 ZFP42Q96MM3 310 aa9.54□□□□□ -0.88
LIG4-202ENST00000405925 CFAP57Q96MR6 1250 aa9.54□□□□□ -0.88
LIG4-202ENST00000405925 MRPL9Q9BYD2 267 aaKnown RBP9.54□□□□□ -0.88
LIG4-202ENST00000405925 SLC8A2Q9UPR5 921 aa9.54□□□□□ -0.88
LIG4-202ENST00000405925 FRMD3A2A2Y4 597 aa9.54□□□□□ -0.88
LIG4-202ENST00000405925 MAP3K6O95382 1288 aa9.54□□□□□ -0.88
LIG4-202ENST00000405925 SNAI1O95863 264 aaPredicted RBP9.54□□□□□ -0.88
LIG4-202ENST00000405925 SETSIPP0DME0 302 aa9.54□□□□□ -0.88
LIG4-202ENST00000405925 RBP3P10745 1247 aa9.54□□□□□ -0.88
LIG4-202ENST00000405925 HTRA3P83110 453 aa9.54□□□□□ -0.88
LIG4-202ENST00000405925 BOLA3Q53S33 107 aa9.54□□□□□ -0.88
LIG4-202ENST00000405925 CHSY1Q86X52 802 aa9.54□□□□□ -0.88
LIG4-202ENST00000405925 MCOLN2Q8IZK6 566 aa9.54□□□□□ -0.88
LIG4-202ENST00000405925 ATL2Q8NHH9 583 aa9.54□□□□□ -0.88
LIG4-202ENST00000405925 RXFP2Q8WXD0 754 aa9.54□□□□□ -0.88
LIG4-202ENST00000405925 SHC3Q92529 594 aa9.54□□□□□ -0.88
LIG4-202ENST00000405925 MFSD14AQ96MC6 490 aa9.54□□□□□ -0.88
LIG4-202ENST00000405925 TRIM51Q9BSJ1 452 aa9.54□□□□□ -0.88
LIG4-202ENST00000405925 FSD1LQ9BXM9 530 aa9.54□□□□□ -0.88
LIG4-202ENST00000405925 MED4Q9NPJ6 270 aa9.54□□□□□ -0.88
LIG4-202ENST00000405925 IPPQ9Y573 584 aa9.54□□□□□ -0.88
LIG4-202ENST00000405925 FAM187AA6NFU0 413 aa9.54□□□□□ -0.88
LIG4-202ENST00000405925 MSH2P43246 934 aa9.54□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 75.6 ms