RNA–Protein interactions for RNA: ENST00000405655.7

PRAME-205, Transcript of preferentially expressed antigen in melanoma, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene PRAME, Length 2,179 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRAME-205ENST00000405655 VPS18Q9P253 973 aa14.88□□□□□ -0.03
PRAME-205ENST00000405655 TSPAN16Q9UKR8 245 aa14.88□□□□□ -0.03
PRAME-205ENST00000405655 BARX2Q9UMQ3 279 aaPredicted RBP14.88□□□□□ -0.03
PRAME-205ENST00000405655 WDR3Q9UNX4 943 aaKnown RBP eCLIP14.88□□□□□ -0.033e-6■■□□□ 14.2
PRAME-205ENST00000405655 DCAF8L1A6NGE4 600 aa14.88□□□□□ -0.03
PRAME-205ENST00000405655 BHMG1C9JSJ3 638 aaPredicted RBP14.88□□□□□ -0.03
PRAME-205ENST00000405655 CCDC188H7C350 402 aa14.88□□□□□ -0.03
PRAME-205ENST00000405655 PTGESO14684 152 aa14.88□□□□□ -0.03
PRAME-205ENST00000405655 IL1R2P27930 398 aa14.88□□□□□ -0.03
PRAME-205ENST00000405655 GPD2P43304 727 aa14.88□□□□□ -0.03
PRAME-205ENST00000405655 MRPS6P82932 125 aaKnown RBP14.88□□□□□ -0.03
PRAME-205ENST00000405655 MAP9Q49MG5 647 aa14.88□□□□□ -0.03
PRAME-205ENST00000405655 CCDC137Q6PK04 289 aaKnown RBP14.88□□□□□ -0.03
PRAME-205ENST00000405655 B4GALNT4Q76KP1 1039 aa14.88□□□□□ -0.03
PRAME-205ENST00000405655 TTC30AQ86WT1 665 aa14.88□□□□□ -0.03
PRAME-205ENST00000405655 OR6B3Q8NGW1 331 aa14.88□□□□□ -0.03
PRAME-205ENST00000405655 PAAF1Q9BRP4 392 aa14.88□□□□□ -0.03
PRAME-205ENST00000405655 ZWILCHQ9H900 591 aa14.88□□□□□ -0.03
PRAME-205ENST00000405655 MGEA5O60502 916 aa14.87□□□□□ -0.03
PRAME-205ENST00000405655 PHF2O75151 1096 aa14.87□□□□□ -0.03
PRAME-205ENST00000405655 MCM3P25205 808 aa14.87□□□□□ -0.03
PRAME-205ENST00000405655 CDH5P33151 784 aaPredicted RBP14.87□□□□□ -0.03
PRAME-205ENST00000405655 RPL21P46778 160 aaKnown RBP14.87□□□□□ -0.03
PRAME-205ENST00000405655 VPS41P49754 854 aa14.87□□□□□ -0.03
PRAME-205ENST00000405655 GOLGA7BQ2TAP0 167 aa14.87□□□□□ -0.03
PRAME-205ENST00000405655 MFSD7Q6UXD7 560 aa14.87□□□□□ -0.03
PRAME-205ENST00000405655 RNF169Q8NCN4 708 aa14.87□□□□□ -0.03
PRAME-205ENST00000405655 CLEC4CQ8WTT0 213 aa14.87□□□□□ -0.03
PRAME-205ENST00000405655 NDRG1Q92597 394 aaKnown RBP14.87□□□□□ -0.03
PRAME-205ENST00000405655 ARL8AQ96BM9 186 aa14.87□□□□□ -0.03
PRAME-205ENST00000405655 ZIM3Q96PE6 472 aa14.87□□□□□ -0.03
PRAME-205ENST00000405655 SYNCQ9H7C4 482 aa14.87□□□□□ -0.03
PRAME-205ENST00000405655 CNTN3Q9P232 1028 aa14.87□□□□□ -0.03
PRAME-205ENST00000405655 PCDH10Q9P2E7 1040 aa14.87□□□□□ -0.03
PRAME-205ENST00000405655 SAE1Q9UBE0 346 aaPredicted RBP14.87□□□□□ -0.03
PRAME-205ENST00000405655 PCSK1NQ9UHG2 260 aa14.87□□□□□ -0.03
PRAME-205ENST00000405655 Q9Y3F1 56 aa14.87□□□□□ -0.03
PRAME-205ENST00000405655 LAMA3Q16787 3333 aa14.87□□□□□ -0.03
PRAME-205ENST00000405655 E5RJQ4 531 aa14.87□□□□□ -0.03
PRAME-205ENST00000405655 SEPT4O43236 478 aa14.87□□□□□ -0.03
PRAME-205ENST00000405655 KRT14P02533 472 aa14.87□□□□□ -0.03
PRAME-205ENST00000405655 TUBBP07437 444 aa14.87□□□□□ -0.03
PRAME-205ENST00000405655 CD48P09326 243 aa14.87□□□□□ -0.03
PRAME-205ENST00000405655 ACAT1P24752 427 aaKnown RBP14.87□□□□□ -0.03
PRAME-205ENST00000405655 ADORA2BP29275 332 aa14.87□□□□□ -0.03
PRAME-205ENST00000405655 ATICP31939 592 aa14.87□□□□□ -0.03
PRAME-205ENST00000405655 COILP38432 576 aaPredicted RBP14.87□□□□□ -0.03
PRAME-205ENST00000405655 THPOP40225 353 aa14.87□□□□□ -0.03
PRAME-205ENST00000405655 YWHAEP62258 255 aaKnown RBP14.87□□□□□ -0.03
PRAME-205ENST00000405655 PDCLQ13371 301 aa14.87□□□□□ -0.03
PRAME-205ENST00000405655 UAP1Q16222 522 aaPredicted RBP14.87□□□□□ -0.03
PRAME-205ENST00000405655 PMF1Q6P1K2 205 aa14.87□□□□□ -0.03
PRAME-205ENST00000405655 SMC1BQ8NDV3 1235 aa14.87□□□□□ -0.03
PRAME-205ENST00000405655 KBTBD7Q8WVZ9 684 aa14.87□□□□□ -0.03
PRAME-205ENST00000405655 TRIM11Q96F44 468 aa14.87□□□□□ -0.03
PRAME-205ENST00000405655 VCPIP1Q96JH7 1222 aa14.87□□□□□ -0.03
PRAME-205ENST00000405655 PWWP2AQ96N64 755 aa14.87□□□□□ -0.03
PRAME-205ENST00000405655 VRTNQ9H8Y1 702 aa14.87□□□□□ -0.03
PRAME-205ENST00000405655 MRPL47Q9HD33 250 aaKnown RBP14.87□□□□□ -0.03
PRAME-205ENST00000405655 TIMM13Q9Y5L4 95 aaPredicted RBP14.87□□□□□ -0.03
PRAME-205ENST00000405655 LSM8O95777 96 aaKnown RBP14.86□□□□□ -0.03
PRAME-205ENST00000405655 TNFRSF8P28908 595 aa14.86□□□□□ -0.03
PRAME-205ENST00000405655 CD52P31358 61 aa14.86□□□□□ -0.03
PRAME-205ENST00000405655 MLH1P40692 756 aa14.86□□□□□ -0.03
PRAME-205ENST00000405655 PLTPP55058 493 aa14.86□□□□□ -0.03
PRAME-205ENST00000405655 SP3Q02447 781 aa14.86□□□□□ -0.03
PRAME-205ENST00000405655 PAK2Q13177 524 aa14.86□□□□□ -0.03
PRAME-205ENST00000405655 C15orf59Q2T9L4 293 aaPredicted RBP14.86□□□□□ -0.03
PRAME-205ENST00000405655 SGO2Q562F6 1265 aa14.86□□□□□ -0.03
PRAME-205ENST00000405655 OSTM1Q86WC4 334 aa14.86□□□□□ -0.03
PRAME-205ENST00000405655 SCUBE3Q8IX30 993 aa14.86□□□□□ -0.03
PRAME-205ENST00000405655 CCDC105Q8IYK2 499 aa14.86□□□□□ -0.03
PRAME-205ENST00000405655 GAD1Q99259 594 aa14.86□□□□□ -0.03
PRAME-205ENST00000405655 KATNAL1Q9BW62 490 aa14.86□□□□□ -0.03
PRAME-205ENST00000405655 MAGEB5Q9BZ81 275 aa14.86□□□□□ -0.03
PRAME-205ENST00000405655 SLITRK6Q9H5Y7 841 aa14.86□□□□□ -0.03
PRAME-205ENST00000405655 I3L4J1 428 aa14.85□□□□□ -0.03
PRAME-205ENST00000405655 RPS6KA5O75582 802 aa14.85□□□□□ -0.03
PRAME-205ENST00000405655 CALB1P05937 261 aa14.85□□□□□ -0.03
PRAME-205ENST00000405655 PAEPP09466 180 aa14.85□□□□□ -0.03
PRAME-205ENST00000405655 GHRP10912 638 aa14.85□□□□□ -0.03
PRAME-205ENST00000405655 KRT3P12035 628 aa14.85□□□□□ -0.03
PRAME-205ENST00000405655 ATF7P17544 494 aaPredicted RBP14.85□□□□□ -0.03
PRAME-205ENST00000405655 TFE3P19532 575 aaPredicted RBP14.85□□□□□ -0.03
PRAME-205ENST00000405655 INCA1Q0VD86 236 aa14.85□□□□□ -0.03
PRAME-205ENST00000405655 MYO1EQ12965 1108 aa14.85□□□□□ -0.03
PRAME-205ENST00000405655 PAN2Q504Q3 1202 aaKnown RBP14.85□□□□□ -0.03
PRAME-205ENST00000405655 DUPD1Q68J44 220 aa14.85□□□□□ -0.03
PRAME-205ENST00000405655 ZDHHC24Q6UX98 284 aa14.85□□□□□ -0.03
PRAME-205ENST00000405655 FAM183BPQ6ZVS7 135 aa14.85□□□□□ -0.03
PRAME-205ENST00000405655 GLIS1Q8NBF1 620 aa14.85□□□□□ -0.03
PRAME-205ENST00000405655 GSTCDQ8NEC7 633 aa14.85□□□□□ -0.03
PRAME-205ENST00000405655 BEST2Q8NFU1 509 aa14.85□□□□□ -0.03
PRAME-205ENST00000405655 CCDC26Q8TAB7 109 aa14.85□□□□□ -0.03
PRAME-205ENST00000405655 NT5C1AQ9BXI3 368 aa14.85□□□□□ -0.03
PRAME-205ENST00000405655 DNAJC17Q9NVM6 304 aaKnown RBP14.85□□□□□ -0.03
PRAME-205ENST00000405655 SCINQ9Y6U3 715 aa14.85□□□□□ -0.03
PRAME-205ENST00000405655 ZNF638Q14966 1978 aaKnown RBP14.85□□□□□ -0.03
PRAME-205ENST00000405655 GOLGA6BA6NDN3 693 aa14.85□□□□□ -0.03
PRAME-205ENST00000405655 F8W810 466 aa14.85□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms