RNA–Protein interactions for RNA: ENST00000403162.7

CCDC47-202, Transcript of coiled-coil domain containing 47, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CCDC47, Length 2,195 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC47-202ENST00000403162 PASD1Q8IV76 773 aa20.89■□□□□ 0.93
CCDC47-202ENST00000403162 LRRC8CQ8TDW0 803 aa20.89■□□□□ 0.93
CCDC47-202ENST00000403162 GTF3C2Q8WUA4 911 aaPredicted RBP20.89■□□□□ 0.93
CCDC47-202ENST00000403162 C10orf82Q8WW14 230 aa20.89■□□□□ 0.93
CCDC47-202ENST00000403162 SPOCK2Q92563 424 aa20.89■□□□□ 0.93
CCDC47-202ENST00000403162 BICD1Q96G01 975 aa20.89■□□□□ 0.93
CCDC47-202ENST00000403162 FNBP1Q96RU3 617 aa20.89■□□□□ 0.93
CCDC47-202ENST00000403162 PDCD2LQ9BRP1 358 aa20.89■□□□□ 0.93
CCDC47-202ENST00000403162 SLCO1B3Q9NPD5 702 aa20.89■□□□□ 0.93
CCDC47-202ENST00000403162 PDLIM7Q9NR12 457 aa20.89■□□□□ 0.93
CCDC47-202ENST00000403162 ARHGAP28Q9P2N2 729 aa20.89■□□□□ 0.93
CCDC47-202ENST00000403162 ZNF148Q9UQR1 794 aa20.89■□□□□ 0.93
CCDC47-202ENST00000403162 POC1B-GALNT4F8VUJ3 575 aa20.88■□□□□ 0.93
CCDC47-202ENST00000403162 ALOX15BO15296 676 aa20.88■□□□□ 0.93
CCDC47-202ENST00000403162 TYROBPO43914 113 aa20.88■□□□□ 0.93
CCDC47-202ENST00000403162 KRT15P19012 456 aa20.88■□□□□ 0.93
CCDC47-202ENST00000403162 ABCD1P33897 745 aa20.88■□□□□ 0.93
CCDC47-202ENST00000403162 RPA3P35244 121 aaPredicted RBP20.88■□□□□ 0.93
CCDC47-202ENST00000403162 FASTKD3Q14CZ7 662 aaKnown RBP20.88■□□□□ 0.93
CCDC47-202ENST00000403162 MCPH1Q8NEM0 835 aa20.88■□□□□ 0.93
CCDC47-202ENST00000403162 CHST13Q8NET6 341 aa20.88■□□□□ 0.93
CCDC47-202ENST00000403162 HHIPL1Q96JK4 782 aa20.88■□□□□ 0.93
CCDC47-202ENST00000403162 RNPEPL1Q9HAU8 725 aa20.88■□□□□ 0.93
CCDC47-202ENST00000403162 SSU72Q9NP77 194 aaKnown RBP20.88■□□□□ 0.93
CCDC47-202ENST00000403162 SHOC2Q9UQ13 582 aa20.88■□□□□ 0.93
CCDC47-202ENST00000403162 CNTN6Q9UQ52 1028 aa20.88■□□□□ 0.93
CCDC47-202ENST00000403162 PCDHA10Q9Y5I2 948 aa20.88■□□□□ 0.93
CCDC47-202ENST00000403162 E7ENQ6 273 aa20.87■□□□□ 0.93
CCDC47-202ENST00000403162 H0YCG3 227 aa20.87■□□□□ 0.93
CCDC47-202ENST00000403162 GNAZP19086 355 aa20.87■□□□□ 0.93
CCDC47-202ENST00000403162 TARSP26639 723 aaKnown RBP20.87■□□□□ 0.93
CCDC47-202ENST00000403162 BAATQ14032 418 aaPredicted RBP20.87■□□□□ 0.93
CCDC47-202ENST00000403162 Q3C1V9 767 aa20.87■□□□□ 0.93
CCDC47-202ENST00000403162 LRRC38Q5VT99 294 aa20.87■□□□□ 0.93
CCDC47-202ENST00000403162 LMBRD2Q68DH5 695 aaPredicted RBP20.87■□□□□ 0.93
CCDC47-202ENST00000403162 SPOPLQ6IQ16 392 aa20.87■□□□□ 0.93
CCDC47-202ENST00000403162 PARK7Q99497 189 aaKnown RBP20.87■□□□□ 0.93
CCDC47-202ENST00000403162 KIF9Q9HAQ2 790 aa20.87■□□□□ 0.93
CCDC47-202ENST00000403162 PXMP2Q9NR77 195 aa20.87■□□□□ 0.93
CCDC47-202ENST00000403162 PCDHB4Q9Y5E5 795 aa20.87■□□□□ 0.93
CCDC47-202ENST00000403162 ZNF862O60290 1169 aa20.87■□□□□ 0.93
CCDC47-202ENST00000403162 ECM2O94769 699 aaPredicted RBP20.87■□□□□ 0.93
CCDC47-202ENST00000403162 STBD1O95210 358 aa20.87■□□□□ 0.93
CCDC47-202ENST00000403162 LUC7L3O95232 432 aaKnown RBP20.87■□□□□ 0.93
CCDC47-202ENST00000403162 VNN1O95497 513 aa20.87■□□□□ 0.93
CCDC47-202ENST00000403162 KRT10P13645 584 aa20.87■□□□□ 0.93
CCDC47-202ENST00000403162 TNNI1P19237 187 aa20.87■□□□□ 0.93
CCDC47-202ENST00000403162 PTPN7P35236 360 aa20.87■□□□□ 0.93
CCDC47-202ENST00000403162 GPS1Q13098 491 aa20.87■□□□□ 0.93
CCDC47-202ENST00000403162 RNASEH2BQ5TBB1 312 aaKnown RBP20.87■□□□□ 0.93
CCDC47-202ENST00000403162 VPS37BQ9H9H4 285 aa20.87■□□□□ 0.93
CCDC47-202ENST00000403162 CYLDQ9NQC7 956 aa20.87■□□□□ 0.93
CCDC47-202ENST00000403162 PSMC3IPQ9P2W1 217 aaPredicted RBP20.87■□□□□ 0.93
CCDC47-202ENST00000403162 HAO1Q9UJM8 370 aa20.87■□□□□ 0.93
CCDC47-202ENST00000403162 PI4K2BG5E9Z4 385 aa20.86■□□□□ 0.93
CCDC47-202ENST00000403162 TRAFD1O14545 582 aaPredicted RBP20.86■□□□□ 0.93
CCDC47-202ENST00000403162 DGAT1O75907 488 aa20.86■□□□□ 0.93
CCDC47-202ENST00000403162 ZSCAN5DPP0CG00 497 aa20.86■□□□□ 0.93
CCDC47-202ENST00000403162 T-ENOLP0DO92 83 aa20.86■□□□□ 0.93
CCDC47-202ENST00000403162 CA4P22748 312 aa20.86■□□□□ 0.93
CCDC47-202ENST00000403162 RASSF2P50749 326 aa20.86■□□□□ 0.93
CCDC47-202ENST00000403162 SLC1A5Q15758 541 aa20.86■□□□□ 0.93
CCDC47-202ENST00000403162 TMEM270Q6UE05 265 aa20.86■□□□□ 0.93
CCDC47-202ENST00000403162 MFSD7Q6UXD7 560 aa20.86■□□□□ 0.93
CCDC47-202ENST00000403162 CENPUQ71F23 418 aa20.86■□□□□ 0.93
CCDC47-202ENST00000403162 C4orf33Q8N1A6 199 aa20.86■□□□□ 0.93
CCDC47-202ENST00000403162 SLC7A6OSQ96CW6 309 aaPredicted RBP20.86■□□□□ 0.93
CCDC47-202ENST00000403162 RMDN3Q96TC7 470 aa20.86■□□□□ 0.93
CCDC47-202ENST00000403162 APOBEC3GQ9HC16 384 aaKnown RBP20.86■□□□□ 0.93
CCDC47-202ENST00000403162 XPNPEP1Q9NQW7 623 aa20.86■□□□□ 0.93
CCDC47-202ENST00000403162 KLHL11Q9NVR0 708 aa20.86■□□□□ 0.93
CCDC47-202ENST00000403162 FBXO40Q9UH90 709 aa20.86■□□□□ 0.93
CCDC47-202ENST00000403162 STYXL1Q9Y6J8 313 aa20.86■□□□□ 0.93
CCDC47-202ENST00000403162 DKC1O60832 514 aaKnown RBP eCLIP20.86■□□□□ 0.93
CCDC47-202ENST00000403162 PEX11AO75192 247 aa20.86■□□□□ 0.93
CCDC47-202ENST00000403162 SLC25A27O95847 323 aa20.86■□□□□ 0.93
CCDC47-202ENST00000403162 KRT1P04264 644 aa20.86■□□□□ 0.93
CCDC47-202ENST00000403162 CALB2P22676 271 aa20.86■□□□□ 0.93
CCDC47-202ENST00000403162 VCPP55072 806 aaKnown RBP20.86■□□□□ 0.93
CCDC47-202ENST00000403162 OASLQ15646 514 aaKnown RBP20.86■□□□□ 0.93
CCDC47-202ENST00000403162 ATP13A4Q4VNC1 1196 aa20.86■□□□□ 0.93
CCDC47-202ENST00000403162 KAZNQ674X7 775 aa20.86■□□□□ 0.93
CCDC47-202ENST00000403162 RBBP8NLQ8NC74 664 aaPredicted RBP20.86■□□□□ 0.93
CCDC47-202ENST00000403162 ATP6V0A1Q93050 837 aa20.86■□□□□ 0.93
CCDC47-202ENST00000403162 NKD2Q969F2 451 aaPredicted RBP20.86■□□□□ 0.93
CCDC47-202ENST00000403162 CYP39A1Q9NYL5 469 aa20.86■□□□□ 0.93
CCDC47-202ENST00000403162 GABBR1Q9UBS5 961 aa20.86■□□□□ 0.93
CCDC47-202ENST00000403162 FETUBQ9UGM5 382 aa20.86■□□□□ 0.93
CCDC47-202ENST00000403162 TMEM191CA6NGB0 347 aa20.85■□□□□ 0.93
CCDC47-202ENST00000403162 TMEM191BP0C7N4 346 aa20.85■□□□□ 0.93
CCDC47-202ENST00000403162 ATF7P17544 494 aaPredicted RBP20.85■□□□□ 0.93
CCDC47-202ENST00000403162 TBXAS1P24557 533 aaPredicted RBP20.85■□□□□ 0.93
CCDC47-202ENST00000403162 GCLCP48506 637 aaPredicted RBP20.85■□□□□ 0.93
CCDC47-202ENST00000403162 LIG4P49917 911 aa20.85■□□□□ 0.93
CCDC47-202ENST00000403162 WNT7BP56706 349 aa20.85■□□□□ 0.93
CCDC47-202ENST00000403162 ZC3H12AQ5D1E8 599 aaKnown RBP20.85■□□□□ 0.93
CCDC47-202ENST00000403162 EFHC2Q5JST6 749 aa20.85■□□□□ 0.93
CCDC47-202ENST00000403162 HHATQ5VTY9 493 aa20.85■□□□□ 0.93
CCDC47-202ENST00000403162 SPOCD1Q6ZMY3 1216 aa20.85■□□□□ 0.93
CCDC47-202ENST00000403162 FAM13CQ8NE31 585 aa20.85■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms