RNA–Protein interactions for RNA: ENST00000401730.5

SNRNP70-202, Transcript of small nuclear ribonucleoprotein U1 subunit 70, humanhuman

TSL 2

Gene SNRNP70, Length 3,144 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP70-202ENST00000401730 FAM71DQ8N9W8 422 aa17.94■□□□□ 0.46
SNRNP70-202ENST00000401730 SLCO2A1Q92959 643 aa17.94■□□□□ 0.46
SNRNP70-202ENST00000401730 SMC6Q96SB8 1091 aa17.94■□□□□ 0.46
SNRNP70-202ENST00000401730 C17orf75Q9HAS0 396 aa17.94■□□□□ 0.46
SNRNP70-202ENST00000401730 NPHS2Q9NP85 383 aa17.94■□□□□ 0.46
SNRNP70-202ENST00000401730 GINM1Q9NU53 330 aa17.94■□□□□ 0.46
SNRNP70-202ENST00000401730 SCINQ9Y6U3 715 aa17.94■□□□□ 0.46
SNRNP70-202ENST00000401730 CNTNAP2Q9UHC6 1331 aa17.93■□□□□ 0.46
SNRNP70-202ENST00000401730 C2orf71A6NGG8 1288 aa17.93■□□□□ 0.46
SNRNP70-202ENST00000401730 SATB1Q01826 763 aa17.93■□□□□ 0.46
SNRNP70-202ENST00000401730 MMRN1Q13201 1228 aa17.93■□□□□ 0.46
SNRNP70-202ENST00000401730 STXBP2Q15833 593 aa17.93■□□□□ 0.46
SNRNP70-202ENST00000401730 FNBP1LQ5T0N5 605 aa17.93■□□□□ 0.46
SNRNP70-202ENST00000401730 TRIM68Q6AZZ1 485 aa17.93■□□□□ 0.46
SNRNP70-202ENST00000401730 KIAA0319LQ8IZA0 1049 aa17.93■□□□□ 0.46
SNRNP70-202ENST00000401730 CGRRF1Q99675 332 aa17.93■□□□□ 0.46
SNRNP70-202ENST00000401730 AVILO75366 819 aa17.93■□□□□ 0.46
SNRNP70-202ENST00000401730 CTCFP49711 727 aaPredicted RBP17.93■□□□□ 0.46
SNRNP70-202ENST00000401730 STAT4Q14765 748 aa17.93■□□□□ 0.46
SNRNP70-202ENST00000401730 LVRNQ6Q4G3 990 aa17.93■□□□□ 0.46
SNRNP70-202ENST00000401730 ZCCHC9Q8N567 271 aaKnown RBP17.93■□□□□ 0.46
SNRNP70-202ENST00000401730 UBA3Q8TBC4 463 aa17.93■□□□□ 0.46
SNRNP70-202ENST00000401730 MAML1Q92585 1016 aa17.93■□□□□ 0.46
SNRNP70-202ENST00000401730 CFAP57Q96MR6 1250 aa17.93■□□□□ 0.46
SNRNP70-202ENST00000401730 CHMP2BQ9UQN3 213 aa17.93■□□□□ 0.46
SNRNP70-202ENST00000401730 SPATA31C2B4DYI2 1134 aa17.92■□□□□ 0.46
SNRNP70-202ENST00000401730 UBA1P22314 1058 aaKnown RBP17.92■□□□□ 0.46
SNRNP70-202ENST00000401730 STAT5BP51692 787 aa17.92■□□□□ 0.46
SNRNP70-202ENST00000401730 TGFB2P61812 414 aa17.92■□□□□ 0.46
SNRNP70-202ENST00000401730 ZNF699Q32M78 642 aa17.92■□□□□ 0.46
SNRNP70-202ENST00000401730 C3orf62Q6ZUJ4 267 aa17.92■□□□□ 0.46
SNRNP70-202ENST00000401730 ZNF677Q86XU0 584 aa17.92■□□□□ 0.46
SNRNP70-202ENST00000401730 CCDC134Q9H6E4 229 aa17.92■□□□□ 0.46
SNRNP70-202ENST00000401730 HMGXB4Q9UGU5 601 aa17.92■□□□□ 0.46
SNRNP70-202ENST00000401730 CYTH4Q9UIA0 394 aa17.92■□□□□ 0.46
SNRNP70-202ENST00000401730 ZC3H11AO75152 810 aaKnown RBP eCLIP17.92■□□□□ 0.464e-8■□□□□ 11
SNRNP70-202ENST00000401730 ADRA1DP25100 572 aa17.92■□□□□ 0.46
SNRNP70-202ENST00000401730 TCF7P36402 384 aaPredicted RBP17.92■□□□□ 0.46
SNRNP70-202ENST00000401730 PSMC1P62191 440 aaKnown RBP17.92■□□□□ 0.46
SNRNP70-202ENST00000401730 BIRC2Q13490 618 aa17.92■□□□□ 0.46
SNRNP70-202ENST00000401730 TRABD2AQ86V40 505 aa17.92■□□□□ 0.46
SNRNP70-202ENST00000401730 RFX6Q8HWS3 928 aa17.92■□□□□ 0.46
SNRNP70-202ENST00000401730 RCOR2Q8IZ40 523 aa17.92■□□□□ 0.46
SNRNP70-202ENST00000401730 SCYL3Q8IZE3 742 aa17.92■□□□□ 0.46
SNRNP70-202ENST00000401730 PYROXD1Q8WU10 500 aa17.92■□□□□ 0.46
SNRNP70-202ENST00000401730 MAGEB18Q96M61 343 aa17.92■□□□□ 0.46
SNRNP70-202ENST00000401730 KIAA1217Q5T5P2 1943 aa17.92■□□□□ 0.46
SNRNP70-202ENST00000401730 STAM2O75886 525 aa17.92■□□□□ 0.46
SNRNP70-202ENST00000401730 PTPN20Q4JDL3 420 aa17.92■□□□□ 0.46
SNRNP70-202ENST00000401730 PHF13Q86YI8 300 aaPredicted RBP17.92■□□□□ 0.46
SNRNP70-202ENST00000401730 UNC45BQ8IWX7 931 aa17.92■□□□□ 0.46
SNRNP70-202ENST00000401730 TMEM35BQ8NCS4 154 aa17.92■□□□□ 0.46
SNRNP70-202ENST00000401730 LRRC8CQ8TDW0 803 aa17.92■□□□□ 0.46
SNRNP70-202ENST00000401730 RSAD2Q8WXG1 361 aa17.92■□□□□ 0.46
SNRNP70-202ENST00000401730 COPS5Q92905 334 aa17.92■□□□□ 0.46
SNRNP70-202ENST00000401730 ZBED3Q96IU2 234 aaPredicted RBP17.92■□□□□ 0.46
SNRNP70-202ENST00000401730 PCYT2Q99447 389 aa17.92■□□□□ 0.46
SNRNP70-202ENST00000401730 YIPF3Q9GZM5 350 aa17.92■□□□□ 0.46
SNRNP70-202ENST00000401730 METTL5Q9NRN9 209 aaKnown RBP17.92■□□□□ 0.46
SNRNP70-202ENST00000401730 DKC1O60832 514 aaKnown RBP eCLIP17.91■□□□□ 0.46
SNRNP70-202ENST00000401730 OAS1P00973 400 aaKnown RBP17.91■□□□□ 0.46
SNRNP70-202ENST00000401730 KRT3P12035 628 aa17.91■□□□□ 0.46
SNRNP70-202ENST00000401730 BNIP1Q12981 228 aa17.91■□□□□ 0.46
SNRNP70-202ENST00000401730 TREML2Q5T2D2 321 aa17.91■□□□□ 0.46
SNRNP70-202ENST00000401730 EEF1DP3Q658K8 133 aa17.91■□□□□ 0.46
SNRNP70-202ENST00000401730 ALLCQ8N6M5 410 aa17.91■□□□□ 0.46
SNRNP70-202ENST00000401730 DHX33Q9H6R0 707 aaKnown RBP17.91■□□□□ 0.46
SNRNP70-202ENST00000401730 hCG_1818297A0A087WSY0 165 aa17.91■□□□□ 0.46
SNRNP70-202ENST00000401730 NAMPTP43490 491 aa17.91■□□□□ 0.46
SNRNP70-202ENST00000401730 CAV1Q03135 178 aa17.91■□□□□ 0.46
SNRNP70-202ENST00000401730 TFDP3Q5H9I0 405 aa17.91■□□□□ 0.46
SNRNP70-202ENST00000401730 SYDE1Q6ZW31 735 aaPredicted RBP17.91■□□□□ 0.46
SNRNP70-202ENST00000401730 REPS2Q8NFH8 660 aa17.91■□□□□ 0.46
SNRNP70-202ENST00000401730 P3H4Q92791 437 aa17.91■□□□□ 0.46
SNRNP70-202ENST00000401730 RBM41Q96IZ5 413 aaKnown RBP17.91■□□□□ 0.46
SNRNP70-202ENST00000401730 ASCC2Q9H1I8 757 aaPredicted RBP17.91■□□□□ 0.46
SNRNP70-202ENST00000401730 GPATCH2LQ9NWQ4 482 aa17.91■□□□□ 0.46
SNRNP70-202ENST00000401730 COL2A1P02458 1487 aaPredicted RBP17.91■□□□□ 0.46
SNRNP70-202ENST00000401730 A0A0G2JND7 137 aa17.9■□□□□ 0.46
SNRNP70-202ENST00000401730 SPDYE16A6NNV3 312 aaPredicted RBP17.9■□□□□ 0.46
SNRNP70-202ENST00000401730 CXCL8P10145 99 aa17.9■□□□□ 0.46
SNRNP70-202ENST00000401730 MSH2P43246 934 aa17.9■□□□□ 0.46
SNRNP70-202ENST00000401730 CLCN3P51790 818 aa17.9■□□□□ 0.46
SNRNP70-202ENST00000401730 GPX6P59796 221 aa17.9■□□□□ 0.46
SNRNP70-202ENST00000401730 MAP3K10Q02779 954 aa17.9■□□□□ 0.46
SNRNP70-202ENST00000401730 C1QBPQ07021 282 aaKnown RBP17.9■□□□□ 0.46
SNRNP70-202ENST00000401730 HIF1AQ16665 826 aa17.9■□□□□ 0.46
SNRNP70-202ENST00000401730 HSDL1Q3SXM5 330 aa17.9■□□□□ 0.46
SNRNP70-202ENST00000401730 SLFN12LQ6IEE8 588 aa17.9■□□□□ 0.46
SNRNP70-202ENST00000401730 SCYL2Q6P3W7 929 aa17.9■□□□□ 0.46
SNRNP70-202ENST00000401730 C1orf228Q6PIY5 440 aa17.9■□□□□ 0.46
SNRNP70-202ENST00000401730 PALM2Q8IXS6 379 aa17.9■□□□□ 0.46
SNRNP70-202ENST00000401730 NETO2Q8NC67 525 aa17.9■□□□□ 0.46
SNRNP70-202ENST00000401730 FBF1Q8TES7 1133 aa17.9■□□□□ 0.46
SNRNP70-202ENST00000401730 TRIM56Q9BRZ2 755 aaKnown RBP17.9■□□□□ 0.46
SNRNP70-202ENST00000401730 UBN1Q9NPG3 1134 aa17.9■□□□□ 0.46
SNRNP70-202ENST00000401730 SLC17A7Q9P2U7 560 aa17.9■□□□□ 0.46
SNRNP70-202ENST00000401730 GINS2Q9Y248 185 aa17.9■□□□□ 0.46
SNRNP70-202ENST00000401730 MYH9P35579 1960 aaKnown RBP17.9■□□□□ 0.46
SNRNP70-202ENST00000401730 VCPP55072 806 aaKnown RBP17.9■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms